RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PTCH1Q13635 1447 aa28.34■■■□□ 2.13
SLX1A-204ENST00000563995 QTRT2Q9H974 415 aaKnown RBP28.33■■■□□ 2.13
SLX1A-204ENST00000563995 LRRC59Q96AG4 307 aaKnown RBP28.32■■■□□ 2.12
SLX1A-204ENST00000563995 DDX17Q92841 729 aaKnown RBP28.31■■■□□ 2.12
SLX1A-204ENST00000563995 PRAG1Q86YV5 1406 aa28.31■■■□□ 2.12
SLX1A-204ENST00000563995 C1orf167Q5SNV9 1468 aa28.31■■■□□ 2.12
SLX1A-204ENST00000563995 ATAD2Q6PL18 1390 aa28.3■■■□□ 2.12
SLX1A-204ENST00000563995 SIN3AQ96ST3 1273 aa28.28■■■□□ 2.12
SLX1A-204ENST00000563995 MYOM2P54296 1465 aa28.27■■■□□ 2.12
SLX1A-204ENST00000563995 C8orf37Q96NL8 207 aa28.27■■■□□ 2.12
SLX1A-204ENST00000563995 ADGRF5Q8IZF2 1346 aa28.26■■■□□ 2.11
SLX1A-204ENST00000563995 ROBO2Q9HCK4 1378 aa28.24■■■□□ 2.11
SLX1A-204ENST00000563995 NGLY1Q96IV0 654 aa28.23■■■□□ 2.11
SLX1A-204ENST00000563995 NRXN1Q9ULB1 1477 aa28.22■■■□□ 2.11
SLX1A-204ENST00000563995 COL22A1Q8NFW1 1626 aaPredicted RBP28.22■■■□□ 2.11
SLX1A-204ENST00000563995 NEUROD1Q13562 356 aa28.22■■■□□ 2.11
SLX1A-204ENST00000563995 PIK3C2GO75747 1445 aa28.21■■■□□ 2.11
SLX1A-204ENST00000563995 DCAF11Q8TEB1 546 aa28.2■■■□□ 2.1
SLX1A-204ENST00000563995 STAC3Q96MF2 364 aa28.19■■■□□ 2.1
SLX1A-204ENST00000563995 SOS2Q07890 1332 aaPredicted RBP28.18■■■□□ 2.1
SLX1A-204ENST00000563995 CDC42BPGQ6DT37 1551 aa28.17■■■□□ 2.1
SLX1A-204ENST00000563995 MARF1Q9Y4F3 1742 aaKnown RBP28.16■■■□□ 2.1
SLX1A-204ENST00000563995 ORAI2Q96SN7 254 aa28.16■■■□□ 2.1
SLX1A-204ENST00000563995 KDM2AQ9Y2K7 1162 aa28.16■■■□□ 2.1
SLX1A-204ENST00000563995 CLSPNQ9HAW4 1339 aa28.16■■■□□ 2.1
SLX1A-204ENST00000563995 ADAMTS2O95450 1211 aa28.12■■■□□ 2.09
SLX1A-204ENST00000563995 L3MBTL2Q969R5 705 aa28.12■■■□□ 2.09
SLX1A-204ENST00000563995 KNDC1Q76NI1 1749 aa28.09■■■□□ 2.09
SLX1A-204ENST00000563995 CCDC125Q86Z20 511 aa28.09■■■□□ 2.09
SLX1A-204ENST00000563995 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
SLX1A-204ENST00000563995 C14orf93Q9H972 538 aaKnown RBP28.09■■■□□ 2.09
SLX1A-204ENST00000563995 PXDNQ92626 1479 aa28.08■■■□□ 2.09
SLX1A-204ENST00000563995 TONSLQ96HA7 1378 aa28.07■■■□□ 2.08
SLX1A-204ENST00000563995 CFAP70Q5T0N1 1121 aa28.05■■■□□ 2.08
SLX1A-204ENST00000563995 TRPC5Q9UL62 973 aaPredicted RBP28.05■■■□□ 2.08
SLX1A-204ENST00000563995 TECPR2O15040 1411 aa28.04■■■□□ 2.08
SLX1A-204ENST00000563995 ATRNO75882 1429 aa28.04■■■□□ 2.08
SLX1A-204ENST00000563995 FNBP4Q8N3X1 1017 aaPredicted RBP28.04■■■□□ 2.08
SLX1A-204ENST00000563995 USP21Q9UK80 565 aa28.04■■■□□ 2.08
SLX1A-204ENST00000563995 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.01■■■□□ 2.07
SLX1A-204ENST00000563995 FMN2Q9NZ56 1722 aa28.01■■■□□ 2.07
SLX1A-204ENST00000563995 NPHP3Q7Z494 1330 aa28■■■□□ 2.07
SLX1A-204ENST00000563995 TMEM132EQ6IEE7 984 aa28■■■□□ 2.07
SLX1A-204ENST00000563995 ADGRB1O14514 1584 aa27.99■■■□□ 2.07
SLX1A-204ENST00000563995 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
SLX1A-204ENST00000563995 KIAA1210Q9ULL0 1709 aa27.98■■■□□ 2.07
SLX1A-204ENST00000563995 KIF1AQ12756 1690 aa27.97■■■□□ 2.07
SLX1A-204ENST00000563995 BCL9LQ86UU0 1499 aa27.97■■■□□ 2.07
SLX1A-204ENST00000563995 ESCO1Q5FWF5 840 aa27.97■■■□□ 2.07
SLX1A-204ENST00000563995 YTHDC2Q9H6S0 1430 aaKnown RBP27.97■■■□□ 2.07
SLX1A-204ENST00000563995 RGPD8O14715 1765 aaPredicted RBP27.95■■■□□ 2.06
SLX1A-204ENST00000563995 LRP5O75197 1615 aa27.95■■■□□ 2.06
SLX1A-204ENST00000563995 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
SLX1A-204ENST00000563995 PLEKHH1Q9ULM0 1364 aa27.92■■■□□ 2.06
SLX1A-204ENST00000563995 FOXO3O43524 673 aa27.92■■■□□ 2.06
SLX1A-204ENST00000563995 WAPLQ7Z5K2 1190 aa27.92■■■□□ 2.06
SLX1A-204ENST00000563995 STK26Q9P289 416 aa27.92■■■□□ 2.06
SLX1A-204ENST00000563995 XPCQ01831 940 aaPredicted RBP27.91■■■□□ 2.06
SLX1A-204ENST00000563995 EP400Q96L91 3159 aa27.91■■■□□ 2.06
SLX1A-204ENST00000563995 TRPM1Q7Z4N2 1603 aa27.9■■■□□ 2.06
SLX1A-204ENST00000563995 TIMELESSQ9UNS1 1208 aa27.9■■■□□ 2.06
SLX1A-204ENST00000563995 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
SLX1A-204ENST00000563995 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
SLX1A-204ENST00000563995 GLI3P10071 1580 aa27.87■■■□□ 2.05
SLX1A-204ENST00000563995 DLC1Q96QB1 1528 aa27.87■■■□□ 2.05
SLX1A-204ENST00000563995 BLMP54132 1417 aaPredicted RBP27.86■■■□□ 2.05
SLX1A-204ENST00000563995 BRWD3Q6RI45 1802 aa27.86■■■□□ 2.05
SLX1A-204ENST00000563995 NUTM2FA1L443 756 aa27.86■■■□□ 2.05
SLX1A-204ENST00000563995 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
SLX1A-204ENST00000563995 SLIT2O94813 1529 aa27.86■■■□□ 2.05
SLX1A-204ENST00000563995 ABCA3Q99758 1704 aa27.85■■■□□ 2.05
SLX1A-204ENST00000563995 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
SLX1A-204ENST00000563995 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
SLX1A-204ENST00000563995 GJD4Q96KN9 370 aaPredicted RBP27.82■■■□□ 2.04
SLX1A-204ENST00000563995 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
SLX1A-204ENST00000563995 DEFB132Q7Z7B7 95 aa27.81■■■□□ 2.04
SLX1A-204ENST00000563995 TRAK1Q9UPV9 953 aa27.81■■■□□ 2.04
SLX1A-204ENST00000563995 ROCK2O75116 1388 aaKnown RBP27.8■■■□□ 2.04
SLX1A-204ENST00000563995 RALGAPBQ86X10 1494 aa27.8■■■□□ 2.04
SLX1A-204ENST00000563995 NWD2Q9ULI1 1742 aa27.8■■■□□ 2.04
SLX1A-204ENST00000563995 ARHGEF28Q8N1W1 1705 aaKnown RBP27.78■■■□□ 2.04
SLX1A-204ENST00000563995 GPRASP1Q5JY77 1395 aa27.77■■■□□ 2.04
SLX1A-204ENST00000563995 PRAM1Q96QH2 718 aa27.77■■■□□ 2.04
SLX1A-204ENST00000563995 TNS3Q68CZ2 1445 aa27.76■■■□□ 2.04
SLX1A-204ENST00000563995 SF3B2Q13435 895 aaKnown RBP27.76■■■□□ 2.03
SLX1A-204ENST00000563995 UNC5CLQ8IV45 518 aa27.76■■■□□ 2.03
SLX1A-204ENST00000563995 POGKQ9P215 609 aa27.74■■■□□ 2.03
SLX1A-204ENST00000563995 KRT28Q7Z3Y7 464 aa27.73■■■□□ 2.03
SLX1A-204ENST00000563995 ADGRB2O60241 1585 aa27.72■■■□□ 2.03
SLX1A-204ENST00000563995 SAFB2Q14151 953 aaKnown RBP eCLIP27.7■■■□□ 2.02
SLX1A-204ENST00000563995 PHF8Q9UPP1 1060 aa27.7■■■□□ 2.02
SLX1A-204ENST00000563995 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.02
SLX1A-204ENST00000563995 PSDA5PKW4 1024 aaPredicted RBP27.69■■■□□ 2.02
SLX1A-204ENST00000563995 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
SLX1A-204ENST00000563995 NRAPQ86VF7 1730 aa27.68■■■□□ 2.02
SLX1A-204ENST00000563995 CARD11Q9BXL7 1154 aa27.68■■■□□ 2.02
SLX1A-204ENST00000563995 ALS2Q96Q42 1657 aa27.65■■■□□ 2.02
SLX1A-204ENST00000563995 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
SLX1A-204ENST00000563995 PSME1Q06323 249 aa27.64■■■□□ 2.02
SLX1A-204ENST00000563995 CABLES1Q8TDN4 633 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms