RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 MROH2AA6NES4 1674 aa23.91■■□□□ 1.42
CBFA2T3-205ENST00000563856 DUSP27Q5VZP5 1158 aa23.91■■□□□ 1.42
CBFA2T3-205ENST00000563856 MAPK8IP3Q9UPT6 1336 aa23.9■■□□□ 1.42
CBFA2T3-205ENST00000563856 ANTXR1Q9H6X2 564 aa23.9■■□□□ 1.42
CBFA2T3-205ENST00000563856 SLKQ9H2G2 1235 aaPredicted RBP23.89■■□□□ 1.41
CBFA2T3-205ENST00000563856 ERVK-7P63135 1459 aa23.88■■□□□ 1.41
CBFA2T3-205ENST00000563856 SPATA31D1Q6ZQQ2 1576 aa23.87■■□□□ 1.41
CBFA2T3-205ENST00000563856 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
CBFA2T3-205ENST00000563856 ADGRB3O60242 1522 aa23.86■■□□□ 1.41
CBFA2T3-205ENST00000563856 GOLGA2Q08379 1002 aa23.85■■□□□ 1.41
CBFA2T3-205ENST00000563856 CC2D1BQ5T0F9 858 aaKnown RBP23.85■■□□□ 1.41
CBFA2T3-205ENST00000563856 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
CBFA2T3-205ENST00000563856 NLRP1Q9C000 1473 aa23.84■■□□□ 1.41
CBFA2T3-205ENST00000563856 ZNF521Q96K83 1311 aa23.84■■□□□ 1.41
CBFA2T3-205ENST00000563856 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
CBFA2T3-205ENST00000563856 UPF2Q9HAU5 1272 aaKnown RBP23.83■■□□□ 1.41
CBFA2T3-205ENST00000563856 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.4
CBFA2T3-205ENST00000563856 PLEKHH1Q9ULM0 1364 aa23.82■■□□□ 1.4
CBFA2T3-205ENST00000563856 MRE11P49959 708 aa23.82■■□□□ 1.4
CBFA2T3-205ENST00000563856 TRPM1Q7Z4N2 1603 aa23.82■■□□□ 1.4
CBFA2T3-205ENST00000563856 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
CBFA2T3-205ENST00000563856 ADAMTS8Q9UP79 889 aa23.81■■□□□ 1.4
CBFA2T3-205ENST00000563856 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
CBFA2T3-205ENST00000563856 FBXO31Q5XUX0 539 aaPredicted RBP23.8■■□□□ 1.4
CBFA2T3-205ENST00000563856 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
CBFA2T3-205ENST00000563856 ISY1Q9ULR0 285 aaKnown RBP23.79■■□□□ 1.4
CBFA2T3-205ENST00000563856 MCM4P33991 863 aa23.78■■□□□ 1.4
CBFA2T3-205ENST00000563856 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
CBFA2T3-205ENST00000563856 LAMC1P11047 1609 aa23.78■■□□□ 1.4
CBFA2T3-205ENST00000563856 PRAG1Q86YV5 1406 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 PANK2Q9BZ23 570 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 C3P01024 1663 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 SEC24BO95487 1268 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 SLFN5Q08AF3 891 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 ARXQ96QS3 562 aa23.77■■□□□ 1.4
CBFA2T3-205ENST00000563856 CGNL1Q0VF96 1302 aa23.76■■□□□ 1.39
CBFA2T3-205ENST00000563856 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
CBFA2T3-205ENST00000563856 TPM2P07951 284 aa23.76■■□□□ 1.39
CBFA2T3-205ENST00000563856 ADAMTSL3P82987 1691 aa23.75■■□□□ 1.39
CBFA2T3-205ENST00000563856 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
CBFA2T3-205ENST00000563856 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
CBFA2T3-205ENST00000563856 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
CBFA2T3-205ENST00000563856 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
CBFA2T3-205ENST00000563856 PANK3Q9H999 370 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 ESPNB1AK53 854 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 IDI1Q13907 227 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 TBC1D32Q96NH3 1257 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 PPLO60437 1756 aa23.74■■□□□ 1.39
CBFA2T3-205ENST00000563856 TBC1D2Q9BYX2 928 aa23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 MYH16Q9H6N6 1097 aa23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 MYOM2P54296 1465 aa23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 IGHDP01880 384 aa23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
CBFA2T3-205ENST00000563856 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
CBFA2T3-205ENST00000563856 TRAK2O60296 914 aa23.7■■□□□ 1.38
CBFA2T3-205ENST00000563856 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.38
CBFA2T3-205ENST00000563856 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
CBFA2T3-205ENST00000563856 GZF1Q9H116 711 aaPredicted RBP23.7■■□□□ 1.38
CBFA2T3-205ENST00000563856 PDCL3Q9H2J4 239 aa23.69■■□□□ 1.38
CBFA2T3-205ENST00000563856 GRPEL1Q9HAV7 217 aa23.69■■□□□ 1.38
CBFA2T3-205ENST00000563856 CHMP5Q9NZZ3 219 aa23.69■■□□□ 1.38
CBFA2T3-205ENST00000563856 TNRQ92752 1358 aa23.68■■□□□ 1.38
CBFA2T3-205ENST00000563856 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
CBFA2T3-205ENST00000563856 CHGAP10645 457 aaKnown RBP23.68■■□□□ 1.38
CBFA2T3-205ENST00000563856 CLUAP1Q96AJ1 413 aa23.68■■□□□ 1.38
CBFA2T3-205ENST00000563856 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
CBFA2T3-205ENST00000563856 NRXN1Q9ULB1 1477 aa23.67■■□□□ 1.38
CBFA2T3-205ENST00000563856 KDM5AP29375 1690 aaKnown RBP23.67■■□□□ 1.38
CBFA2T3-205ENST00000563856 DDX11L8A8MPP1 907 aa23.66■■□□□ 1.38
CBFA2T3-205ENST00000563856 TMF1P82094 1093 aa23.66■■□□□ 1.38
CBFA2T3-205ENST00000563856 TESK2Q96S53 571 aa23.66■■□□□ 1.38
CBFA2T3-205ENST00000563856 TRIM44Q96DX7 344 aaPredicted RBP23.66■■□□□ 1.38
CBFA2T3-205ENST00000563856 KIAA1210Q9ULL0 1709 aa23.65■■□□□ 1.38
CBFA2T3-205ENST00000563856 PPP2R1AP30153 589 aa23.65■■□□□ 1.38
CBFA2T3-205ENST00000563856 AAMPQ13685 434 aa23.65■■□□□ 1.38
CBFA2T3-205ENST00000563856 E9PSI1 815 aa23.63■■□□□ 1.37
CBFA2T3-205ENST00000563856 BCAR3O75815 825 aa23.63■■□□□ 1.37
CBFA2T3-205ENST00000563856 A2ML1A8K2U0 1454 aa23.62■■□□□ 1.37
CBFA2T3-205ENST00000563856 PMFBP1Q8TBY8 1022 aa23.62■■□□□ 1.37
CBFA2T3-205ENST00000563856 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
CBFA2T3-205ENST00000563856 PIK3C2GO75747 1445 aa23.61■■□□□ 1.37
CBFA2T3-205ENST00000563856 ERBB4Q15303 1308 aa23.6■■□□□ 1.37
CBFA2T3-205ENST00000563856 UBR1Q8IWV7 1749 aa23.6■■□□□ 1.37
CBFA2T3-205ENST00000563856 NGEFQ8N5V2 710 aa23.59■■□□□ 1.37
CBFA2T3-205ENST00000563856 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
CBFA2T3-205ENST00000563856 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
CBFA2T3-205ENST00000563856 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
CBFA2T3-205ENST00000563856 KNSTRNQ9Y448 316 aa23.58■■□□□ 1.37
CBFA2T3-205ENST00000563856 CANXP27824 592 aaKnown RBP23.57■■□□□ 1.36
CBFA2T3-205ENST00000563856 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
CBFA2T3-205ENST00000563856 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
CBFA2T3-205ENST00000563856 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
CBFA2T3-205ENST00000563856 VGFO15240 615 aaPredicted RBP23.54■■□□□ 1.36
CBFA2T3-205ENST00000563856 SPINK5Q9NQ38 1064 aaPredicted RBP23.53■■□□□ 1.36
CBFA2T3-205ENST00000563856 COG6Q9Y2V7 657 aa23.53■■□□□ 1.36
CBFA2T3-205ENST00000563856 SPRYD3Q8NCJ5 442 aa23.52■■□□□ 1.36
CBFA2T3-205ENST00000563856 PTMSP20962 102 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms