RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
HDGFL3-204ENST00000563790 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
HDGFL3-204ENST00000563790 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-204ENST00000563790 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
HDGFL3-204ENST00000563790 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
HDGFL3-204ENST00000563790 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
HDGFL3-204ENST00000563790 ADAMTS13Q76LX8 1427 aa18.02■□□□□ 0.48
HDGFL3-204ENST00000563790 PLCH1Q4KWH8 1693 aa18.02■□□□□ 0.47
HDGFL3-204ENST00000563790 CASKIN1Q8WXD9 1431 aa18■□□□□ 0.47
HDGFL3-204ENST00000563790 TNS4Q8IZW8 715 aa18■□□□□ 0.47
HDGFL3-204ENST00000563790 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
HDGFL3-204ENST00000563790 VPS72Q15906 364 aa17.99■□□□□ 0.47
HDGFL3-204ENST00000563790 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
HDGFL3-204ENST00000563790 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
HDGFL3-204ENST00000563790 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
HDGFL3-204ENST00000563790 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
HDGFL3-204ENST00000563790 PTPRUQ92729 1446 aa17.97■□□□□ 0.47
HDGFL3-204ENST00000563790 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
HDGFL3-204ENST00000563790 USP32Q8NFA0 1604 aa17.96■□□□□ 0.47
HDGFL3-204ENST00000563790 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
HDGFL3-204ENST00000563790 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
HDGFL3-204ENST00000563790 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
HDGFL3-204ENST00000563790 NOS1P29475 1434 aa17.95■□□□□ 0.46
HDGFL3-204ENST00000563790 RIMS2Q9UQ26 1411 aa17.94■□□□□ 0.46
HDGFL3-204ENST00000563790 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
HDGFL3-204ENST00000563790 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
HDGFL3-204ENST00000563790 SYT17Q9BSW7 474 aa17.93■□□□□ 0.46
HDGFL3-204ENST00000563790 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
HDGFL3-204ENST00000563790 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
HDGFL3-204ENST00000563790 A0A0G2JS52 829 aa17.89■□□□□ 0.45
HDGFL3-204ENST00000563790 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
HDGFL3-204ENST00000563790 MYT1Q01538 1121 aa17.89■□□□□ 0.45
HDGFL3-204ENST00000563790 FHDC1Q9C0D6 1143 aaPredicted RBP17.88■□□□□ 0.45
HDGFL3-204ENST00000563790 PXDNQ92626 1479 aa17.88■□□□□ 0.45
HDGFL3-204ENST00000563790 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
HDGFL3-204ENST00000563790 DNAJC5GQ8N7S2 189 aa17.87■□□□□ 0.45
HDGFL3-204ENST00000563790 NRAPQ86VF7 1730 aa17.86■□□□□ 0.45
HDGFL3-204ENST00000563790 PTGER2P43116 358 aa17.86■□□□□ 0.45
HDGFL3-204ENST00000563790 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
HDGFL3-204ENST00000563790 APBA3O96018 575 aa17.85■□□□□ 0.45
HDGFL3-204ENST00000563790 ORAI2Q96SN7 254 aa17.85■□□□□ 0.45
HDGFL3-204ENST00000563790 FYCO1Q9BQS8 1478 aa17.85■□□□□ 0.45
HDGFL3-204ENST00000563790 NEXMIFQ5QGS0 1516 aa17.84■□□□□ 0.45
HDGFL3-204ENST00000563790 TRIM37O94972 964 aa17.84■□□□□ 0.45
HDGFL3-204ENST00000563790 SLC52A1Q9NWF4 448 aa17.84■□□□□ 0.45
HDGFL3-204ENST00000563790 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
HDGFL3-204ENST00000563790 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
HDGFL3-204ENST00000563790 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
HDGFL3-204ENST00000563790 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
HDGFL3-204ENST00000563790 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
HDGFL3-204ENST00000563790 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
HDGFL3-204ENST00000563790 APLP1P51693 650 aa17.8■□□□□ 0.44
HDGFL3-204ENST00000563790 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDGFL3-204ENST00000563790 LMTK2Q8IWU2 1503 aa17.8■□□□□ 0.44
HDGFL3-204ENST00000563790 EEA1Q15075 1411 aa17.8■□□□□ 0.44
HDGFL3-204ENST00000563790 NPHP3Q7Z494 1330 aa17.79■□□□□ 0.44
HDGFL3-204ENST00000563790 DUOX2Q9NRD8 1548 aa17.79■□□□□ 0.44
HDGFL3-204ENST00000563790 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
HDGFL3-204ENST00000563790 NRXN3Q9Y4C0 1643 aa17.78■□□□□ 0.44
HDGFL3-204ENST00000563790 WDR90Q96KV7 1748 aa17.78■□□□□ 0.44
HDGFL3-204ENST00000563790 MAP3K5Q99683 1374 aa17.78■□□□□ 0.44
HDGFL3-204ENST00000563790 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
HDGFL3-204ENST00000563790 GPR162Q16538 588 aa17.76■□□□□ 0.43
HDGFL3-204ENST00000563790 FAM196AQ6ZSG2 479 aa17.76■□□□□ 0.43
HDGFL3-204ENST00000563790 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
HDGFL3-204ENST00000563790 ZBTB7AO95365 584 aa17.74■□□□□ 0.43
HDGFL3-204ENST00000563790 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
HDGFL3-204ENST00000563790 PDGFDQ9GZP0 370 aaPredicted RBP17.73■□□□□ 0.43
HDGFL3-204ENST00000563790 ABCC5O15440 1437 aa17.72■□□□□ 0.43
HDGFL3-204ENST00000563790 GPBP1L1Q9HC44 474 aaPredicted RBP17.72■□□□□ 0.43
HDGFL3-204ENST00000563790 JMYQ8N9B5 988 aa17.71■□□□□ 0.43
HDGFL3-204ENST00000563790 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
HDGFL3-204ENST00000563790 KANK1Q14678 1352 aa17.69■□□□□ 0.42
HDGFL3-204ENST00000563790 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
HDGFL3-204ENST00000563790 PDE4DIPQ5VU43 2346 aa17.67■□□□□ 0.42
HDGFL3-204ENST00000563790 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
HDGFL3-204ENST00000563790 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
HDGFL3-204ENST00000563790 XPCQ01831 940 aaPredicted RBP17.66■□□□□ 0.42
HDGFL3-204ENST00000563790 ANO8Q9HCE9 1232 aaPredicted RBP17.66■□□□□ 0.42
HDGFL3-204ENST00000563790 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
HDGFL3-204ENST00000563790 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
HDGFL3-204ENST00000563790 SPATA31A3Q5VYP0 1347 aa17.64■□□□□ 0.41
HDGFL3-204ENST00000563790 FOXO3O43524 673 aa17.63■□□□□ 0.41
HDGFL3-204ENST00000563790 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
HDGFL3-204ENST00000563790 COL14A1Q05707 1796 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 KLRG1Q96E93 195 aa17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 METP08581 1390 aa17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
HDGFL3-204ENST00000563790 ARXQ96QS3 562 aa17.61■□□□□ 0.41
HDGFL3-204ENST00000563790 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
HDGFL3-204ENST00000563790 ADCY9O60503 1353 aa17.6■□□□□ 0.41
HDGFL3-204ENST00000563790 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
HDGFL3-204ENST00000563790 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
HDGFL3-204ENST00000563790 TNRC18O15417 2968 aaPredicted RBP17.59■□□□□ 0.41
HDGFL3-204ENST00000563790 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.41
HDGFL3-204ENST00000563790 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.41
HDGFL3-204ENST00000563790 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms