RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 DHX57Q6P158 1386 aaKnown RBP36.34■■■■□ 3.41
PPP4C-206ENST00000563597 LRRC59Q96AG4 307 aaKnown RBP36.33■■■■□ 3.41
PPP4C-206ENST00000563597 SIRT1Q96EB6 747 aa36.32■■■■□ 3.4
PPP4C-206ENST00000563597 STAC3Q96MF2 364 aa36.32■■■■□ 3.4
PPP4C-206ENST00000563597 LRP6O75581 1613 aa36.3■■■■□ 3.4
PPP4C-206ENST00000563597 DDX17Q92841 729 aaKnown RBP36.3■■■■□ 3.4
PPP4C-206ENST00000563597 ORAI2Q96SN7 254 aa36.3■■■■□ 3.4
PPP4C-206ENST00000563597 PLEKHH1Q9ULM0 1364 aa36.29■■■■□ 3.4
PPP4C-206ENST00000563597 DCAF11Q8TEB1 546 aa36.28■■■■□ 3.4
PPP4C-206ENST00000563597 MEX3CQ5U5Q3 659 aaKnown RBP36.24■■■■□ 3.39
PPP4C-206ENST00000563597 KDM2AQ9Y2K7 1162 aa36.24■■■■□ 3.39
PPP4C-206ENST00000563597 POTEAQ6S8J7 498 aa36.22■■■■□ 3.39
PPP4C-206ENST00000563597 SOS2Q07890 1332 aaPredicted RBP36.22■■■■□ 3.39
PPP4C-206ENST00000563597 ADGRB1O14514 1584 aa36.21■■■■□ 3.39
PPP4C-206ENST00000563597 ESCO1Q5FWF5 840 aa36.21■■■■□ 3.39
PPP4C-206ENST00000563597 DLC1Q96QB1 1528 aa36.2■■■■□ 3.39
PPP4C-206ENST00000563597 PNPLA6Q8IY17 1366 aa36.2■■■■□ 3.39
PPP4C-206ENST00000563597 FMN2Q9NZ56 1722 aa36.18■■■■□ 3.38
PPP4C-206ENST00000563597 NUTM2BA6NNL0 878 aaPredicted RBP36.17■■■■□ 3.38
PPP4C-206ENST00000563597 NUTM2EB1AL46 878 aaPredicted RBP36.17■■■■□ 3.38
PPP4C-206ENST00000563597 NUTM2AQ8IVF1 878 aaPredicted RBP36.17■■■■□ 3.38
PPP4C-206ENST00000563597 NPHP3Q7Z494 1330 aa36.16■■■■□ 3.38
PPP4C-206ENST00000563597 PRAM1Q96QH2 718 aa36.16■■■■□ 3.38
PPP4C-206ENST00000563597 NUTM2FA1L443 756 aa36.14■■■■□ 3.38
PPP4C-206ENST00000563597 ZNF772Q68DY9 489 aaPredicted RBP36.11■■■■□ 3.37
PPP4C-206ENST00000563597 POGKQ9P215 609 aa36.11■■■■□ 3.37
PPP4C-206ENST00000563597 SAFB2Q14151 953 aaKnown RBP eCLIP36.09■■■■□ 3.37
PPP4C-206ENST00000563597 PXDNQ92626 1479 aa36.08■■■■□ 3.37
PPP4C-206ENST00000563597 FOXO3O43524 673 aa36.08■■■■□ 3.37
PPP4C-206ENST00000563597 TRAK1Q9UPV9 953 aa36.08■■■■□ 3.37
PPP4C-206ENST00000563597 KIF1AQ12756 1690 aa36.07■■■■□ 3.36
PPP4C-206ENST00000563597 ADGRB2O60241 1585 aa36.05■■■■□ 3.36
PPP4C-206ENST00000563597 COL22A1Q8NFW1 1626 aaPredicted RBP36.01■■■■□ 3.36
PPP4C-206ENST00000563597 XPCQ01831 940 aaPredicted RBP35.99■■■■□ 3.35
PPP4C-206ENST00000563597 AFF2P51816 1311 aa35.99■■■■□ 3.35
PPP4C-206ENST00000563597 KIAA1210Q9ULL0 1709 aa35.98■■■■□ 3.35
PPP4C-206ENST00000563597 ANKARQ7Z5J8 1434 aa35.98■■■■□ 3.35
PPP4C-206ENST00000563597 RGPD8O14715 1765 aaPredicted RBP35.97■■■■□ 3.35
PPP4C-206ENST00000563597 C8orf37Q96NL8 207 aa35.97■■■■□ 3.35
PPP4C-206ENST00000563597 PHF8Q9UPP1 1060 aa35.96■■■■□ 3.35
PPP4C-206ENST00000563597 ADAMTS2O95450 1211 aa35.94■■■■□ 3.34
PPP4C-206ENST00000563597 ARHGEF28Q8N1W1 1705 aaKnown RBP35.94■■■■□ 3.34
PPP4C-206ENST00000563597 EIF3AQ14152 1382 aaKnown RBP35.93■■■■□ 3.34
PPP4C-206ENST00000563597 MINK1Q8N4C8 1332 aaPredicted RBP35.93■■■■□ 3.34
PPP4C-206ENST00000563597 HIRIP3Q9BW71 556 aaPredicted RBP35.93■■■■□ 3.34
PPP4C-206ENST00000563597 USP32Q8NFA0 1604 aa35.91■■■■□ 3.34
PPP4C-206ENST00000563597 KRT28Q7Z3Y7 464 aa35.91■■■■□ 3.34
PPP4C-206ENST00000563597 SPATA31A3Q5VYP0 1347 aa35.89■■■■□ 3.34
PPP4C-206ENST00000563597 NGLY1Q96IV0 654 aa35.89■■■■□ 3.34
PPP4C-206ENST00000563597 WASLO00401 505 aaPredicted RBP35.87■■■■□ 3.33
PPP4C-206ENST00000563597 RXRBP28702 533 aa35.87■■■■□ 3.33
PPP4C-206ENST00000563597 TULP4Q9NRJ4 1543 aa35.87■■■■□ 3.33
PPP4C-206ENST00000563597 PSME1Q06323 249 aa35.86■■■■□ 3.33
PPP4C-206ENST00000563597 L3MBTL2Q969R5 705 aa35.83■■■■□ 3.33
PPP4C-206ENST00000563597 TNS3Q68CZ2 1445 aa35.83■■■■□ 3.33
PPP4C-206ENST00000563597 CDK12Q9NYV4 1490 aaPredicted RBP35.82■■■■□ 3.32
PPP4C-206ENST00000563597 SIN3AQ96ST3 1273 aa35.82■■■■□ 3.32
PPP4C-206ENST00000563597 SBNO1A3KN83 1393 aa35.81■■■■□ 3.32
PPP4C-206ENST00000563597 NBPF1Q3BBV0 1214 aa35.81■■■■□ 3.32
PPP4C-206ENST00000563597 QTRT2Q9H974 415 aaKnown RBP35.81■■■■□ 3.32
PPP4C-206ENST00000563597 PRR36Q9H6K5 1346 aa35.81■■■■□ 3.32
PPP4C-206ENST00000563597 FNBP4Q8N3X1 1017 aaPredicted RBP35.8■■■■□ 3.32
PPP4C-206ENST00000563597 PMFBP1Q8TBY8 1022 aa35.8■■■■□ 3.32
PPP4C-206ENST00000563597 MARF1Q9Y4F3 1742 aaKnown RBP35.78■■■■□ 3.32
PPP4C-206ENST00000563597 USP21Q9UK80 565 aa35.77■■■■□ 3.32
PPP4C-206ENST00000563597 RBM6P78332 1123 aaKnown RBP35.76■■■■□ 3.32
PPP4C-206ENST00000563597 NEUROD1Q13562 356 aa35.75■■■■□ 3.31
PPP4C-206ENST00000563597 ARHGEF10O15013 1369 aa35.75■■■■□ 3.31
PPP4C-206ENST00000563597 TRIM26Q12899 539 aaPredicted RBP35.73■■■■□ 3.31
PPP4C-206ENST00000563597 GPRASP1Q5JY77 1395 aa35.73■■■■□ 3.31
PPP4C-206ENST00000563597 ATP7BP35670 1465 aa35.73■■■■□ 3.31
PPP4C-206ENST00000563597 ITSN1Q15811 1721 aa35.71■■■■□ 3.31
PPP4C-206ENST00000563597 TRPC5Q9UL62 973 aaPredicted RBP35.71■■■■□ 3.31
PPP4C-206ENST00000563597 NUDT16Q96DE0 195 aaKnown RBP35.69■■■■□ 3.3
PPP4C-206ENST00000563597 CDK19Q9BWU1 502 aa35.69■■■■□ 3.3
PPP4C-206ENST00000563597 TRPM3Q9HCF6 1732 aaPredicted RBP35.69■■■■□ 3.3
PPP4C-206ENST00000563597 LMOD2Q6P5Q4 547 aa35.68■■■■□ 3.3
PPP4C-206ENST00000563597 NGDNQ8NEJ9 315 aaKnown RBP35.67■■■■□ 3.3
PPP4C-206ENST00000563597 CENPJQ9HC77 1338 aaPredicted RBP35.66■■■■□ 3.3
PPP4C-206ENST00000563597 TRPM1Q7Z4N2 1603 aa35.66■■■■□ 3.3
PPP4C-206ENST00000563597 HAP1P54257 671 aaPredicted RBP35.66■■■■□ 3.3
PPP4C-206ENST00000563597 BCL9LQ86UU0 1499 aa35.66■■■■□ 3.3
PPP4C-206ENST00000563597 ATRNO75882 1429 aa35.66■■■■□ 3.3
PPP4C-206ENST00000563597 RGS12O14924 1447 aa35.65■■■■□ 3.3
PPP4C-206ENST00000563597 CABLES1Q8TDN4 633 aa35.62■■■■□ 3.29
PPP4C-206ENST00000563597 ABCA3Q99758 1704 aa35.62■■■■□ 3.29
PPP4C-206ENST00000563597 ALS2Q96Q42 1657 aa35.62■■■■□ 3.29
PPP4C-206ENST00000563597 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.6■■■■□ 3.29
PPP4C-206ENST00000563597 TOPAZ1Q8N9V7 1692 aa35.6■■■■□ 3.29
PPP4C-206ENST00000563597 CCDC61Q9Y6R9 512 aa35.6■■■■□ 3.29
PPP4C-206ENST00000563597 SLIT2O94813 1529 aa35.6■■■■□ 3.29
PPP4C-206ENST00000563597 ROCK2O75116 1388 aaKnown RBP35.58■■■■□ 3.29
PPP4C-206ENST00000563597 QRICH2Q9H0J4 1663 aa35.58■■■■□ 3.29
PPP4C-206ENST00000563597 PLEKHG5O94827 1062 aa35.56■■■■□ 3.28
PPP4C-206ENST00000563597 POLR3AO14802 1390 aaPredicted RBP35.55■■■■□ 3.28
PPP4C-206ENST00000563597 UNC5CLQ8IV45 518 aa35.55■■■■□ 3.28
PPP4C-206ENST00000563597 PLEKHG3A1L390 1219 aa35.53■■■■□ 3.28
PPP4C-206ENST00000563597 PAK3O75914 559 aaPredicted RBP35.53■■■■□ 3.28
PPP4C-206ENST00000563597 SRPK2P78362 688 aaKnown RBP35.53■■■■□ 3.28
PPP4C-206ENST00000563597 UPF1Q92900 1129 aaKnown RBP eCLIP35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms