RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 SOS2Q07890 1332 aaPredicted RBP31.16■■■□□ 2.58
GGA2-205ENST00000563494 MYOM2P54296 1465 aa31.15■■■□□ 2.58
GGA2-205ENST00000563494 WAPLQ7Z5K2 1190 aa31.15■■■□□ 2.58
GGA2-205ENST00000563494 PNPLA6Q8IY17 1366 aa31.15■■■□□ 2.58
GGA2-205ENST00000563494 PLEKHH1Q9ULM0 1364 aa31.13■■■□□ 2.57
GGA2-205ENST00000563494 SIRT1Q96EB6 747 aa31.12■■■□□ 2.57
GGA2-205ENST00000563494 YTHDC2Q9H6S0 1430 aaKnown RBP31.12■■■□□ 2.57
GGA2-205ENST00000563494 STK26Q9P289 416 aa31.11■■■□□ 2.57
GGA2-205ENST00000563494 CFAP70Q5T0N1 1121 aa31.07■■■□□ 2.56
GGA2-205ENST00000563494 ZNF772Q68DY9 489 aaPredicted RBP31.07■■■□□ 2.56
GGA2-205ENST00000563494 NUTM2BA6NNL0 878 aaPredicted RBP31.06■■■□□ 2.56
GGA2-205ENST00000563494 NUTM2EB1AL46 878 aaPredicted RBP31.06■■■□□ 2.56
GGA2-205ENST00000563494 NUTM2AQ8IVF1 878 aaPredicted RBP31.06■■■□□ 2.56
GGA2-205ENST00000563494 MEX3CQ5U5Q3 659 aaKnown RBP31.05■■■□□ 2.56
GGA2-205ENST00000563494 PXDNQ92626 1479 aa31.02■■■□□ 2.56
GGA2-205ENST00000563494 FMN2Q9NZ56 1722 aa31.02■■■□□ 2.56
GGA2-205ENST00000563494 COL22A1Q8NFW1 1626 aaPredicted RBP31.01■■■□□ 2.55
GGA2-205ENST00000563494 ESCO1Q5FWF5 840 aa31■■■□□ 2.55
GGA2-205ENST00000563494 ADGRB1O14514 1584 aa31■■■□□ 2.55
GGA2-205ENST00000563494 DHX57Q6P158 1386 aaKnown RBP30.98■■■□□ 2.55
GGA2-205ENST00000563494 AFF2P51816 1311 aa30.98■■■□□ 2.55
GGA2-205ENST00000563494 NPHP3Q7Z494 1330 aa30.96■■■□□ 2.55
GGA2-205ENST00000563494 DLC1Q96QB1 1528 aa30.95■■■□□ 2.55
GGA2-205ENST00000563494 FOXO3O43524 673 aa30.94■■■□□ 2.54
GGA2-205ENST00000563494 NUTM2FA1L443 756 aa30.92■■■□□ 2.54
GGA2-205ENST00000563494 CDK12Q9NYV4 1490 aaPredicted RBP30.91■■■□□ 2.54
GGA2-205ENST00000563494 RGPD8O14715 1765 aaPredicted RBP30.91■■■□□ 2.54
GGA2-205ENST00000563494 STAC3Q96MF2 364 aa30.9■■■□□ 2.54
GGA2-205ENST00000563494 RXRBP28702 533 aa30.89■■■□□ 2.54
GGA2-205ENST00000563494 DCAF11Q8TEB1 546 aa30.89■■■□□ 2.54
GGA2-205ENST00000563494 C8orf37Q96NL8 207 aa30.89■■■□□ 2.54
GGA2-205ENST00000563494 PRAM1Q96QH2 718 aa30.89■■■□□ 2.54
GGA2-205ENST00000563494 KIF1AQ12756 1690 aa30.87■■■□□ 2.53
GGA2-205ENST00000563494 ADAMTS2O95450 1211 aa30.86■■■□□ 2.53
GGA2-205ENST00000563494 XPCQ01831 940 aaPredicted RBP30.86■■■□□ 2.53
GGA2-205ENST00000563494 FNBP4Q8N3X1 1017 aaPredicted RBP30.85■■■□□ 2.53
GGA2-205ENST00000563494 USP32Q8NFA0 1604 aa30.84■■■□□ 2.53
GGA2-205ENST00000563494 ADGRB2O60241 1585 aa30.84■■■□□ 2.53
GGA2-205ENST00000563494 QTRT2Q9H974 415 aaKnown RBP30.84■■■□□ 2.53
GGA2-205ENST00000563494 KDM2AQ9Y2K7 1162 aa30.84■■■□□ 2.53
GGA2-205ENST00000563494 NGLY1Q96IV0 654 aa30.82■■■□□ 2.52
GGA2-205ENST00000563494 SPATA31A3Q5VYP0 1347 aa30.81■■■□□ 2.52
GGA2-205ENST00000563494 MARF1Q9Y4F3 1742 aaKnown RBP30.8■■■□□ 2.52
GGA2-205ENST00000563494 RBM6P78332 1123 aaKnown RBP30.79■■■□□ 2.52
GGA2-205ENST00000563494 SAFB2Q14151 953 aaKnown RBP eCLIP30.79■■■□□ 2.52
GGA2-205ENST00000563494 UPF1Q92900 1129 aaKnown RBP eCLIP30.78■■■□□ 2.52
GGA2-205ENST00000563494 PHF8Q9UPP1 1060 aa30.78■■■□□ 2.52
GGA2-205ENST00000563494 TRAK1Q9UPV9 953 aa30.78■■■□□ 2.52
GGA2-205ENST00000563494 KRT28Q7Z3Y7 464 aa30.77■■■□□ 2.52
GGA2-205ENST00000563494 RGS12O14924 1447 aa30.76■■■□□ 2.51
GGA2-205ENST00000563494 ANKARQ7Z5J8 1434 aa30.76■■■□□ 2.51
GGA2-205ENST00000563494 BCL9LQ86UU0 1499 aa30.76■■■□□ 2.51
GGA2-205ENST00000563494 POGKQ9P215 609 aa30.75■■■□□ 2.51
GGA2-205ENST00000563494 USP21Q9UK80 565 aa30.73■■■□□ 2.51
GGA2-205ENST00000563494 ATRNO75882 1429 aa30.73■■■□□ 2.51
GGA2-205ENST00000563494 ARHGEF28Q8N1W1 1705 aaKnown RBP30.71■■■□□ 2.51
GGA2-205ENST00000563494 PRR36Q9H6K5 1346 aa30.71■■■□□ 2.51
GGA2-205ENST00000563494 SBNO1A3KN83 1393 aa30.69■■■□□ 2.5
GGA2-205ENST00000563494 TNS3Q68CZ2 1445 aa30.68■■■□□ 2.5
GGA2-205ENST00000563494 HIRIP3Q9BW71 556 aaPredicted RBP30.68■■■□□ 2.5
GGA2-205ENST00000563494 TRPC5Q9UL62 973 aaPredicted RBP30.68■■■□□ 2.5
GGA2-205ENST00000563494 KIAA1210Q9ULL0 1709 aa30.67■■■□□ 2.5
GGA2-205ENST00000563494 MINK1Q8N4C8 1332 aaPredicted RBP30.67■■■□□ 2.5
GGA2-205ENST00000563494 WASLO00401 505 aaPredicted RBP30.66■■■□□ 2.5
GGA2-205ENST00000563494 PSME1Q06323 249 aa30.66■■■□□ 2.5
GGA2-205ENST00000563494 TRPM3Q9HCF6 1732 aaPredicted RBP30.66■■■□□ 2.5
GGA2-205ENST00000563494 SLIT2O94813 1529 aa30.66■■■□□ 2.5
GGA2-205ENST00000563494 TULP4Q9NRJ4 1543 aa30.66■■■□□ 2.5
GGA2-205ENST00000563494 PMFBP1Q8TBY8 1022 aa30.65■■■□□ 2.5
GGA2-205ENST00000563494 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.64■■■□□ 2.5
GGA2-205ENST00000563494 ABCA3Q99758 1704 aa30.61■■■□□ 2.49
GGA2-205ENST00000563494 ALS2Q96Q42 1657 aa30.59■■■□□ 2.49
GGA2-205ENST00000563494 EIF3AQ14152 1382 aaKnown RBP30.59■■■□□ 2.49
GGA2-205ENST00000563494 NBPF1Q3BBV0 1214 aa30.59■■■□□ 2.49
GGA2-205ENST00000563494 CABLES1Q8TDN4 633 aa30.59■■■□□ 2.49
GGA2-205ENST00000563494 EP400Q96L91 3159 aa30.57■■■□□ 2.48
GGA2-205ENST00000563494 ATP7BP35670 1465 aa30.57■■■□□ 2.48
GGA2-205ENST00000563494 ARHGEF10O15013 1369 aa30.56■■■□□ 2.48
GGA2-205ENST00000563494 GJD4Q96KN9 370 aaPredicted RBP30.56■■■□□ 2.48
GGA2-205ENST00000563494 UNC5CLQ8IV45 518 aa30.55■■■□□ 2.48
GGA2-205ENST00000563494 GLI3P10071 1580 aa30.54■■■□□ 2.48
GGA2-205ENST00000563494 CRYBG1Q9Y4K1 1723 aa30.51■■■□□ 2.47
GGA2-205ENST00000563494 NUDT16Q96DE0 195 aaKnown RBP30.51■■■□□ 2.47
GGA2-205ENST00000563494 NWD2Q9ULI1 1742 aa30.5■■■□□ 2.47
GGA2-205ENST00000563494 L3MBTL2Q969R5 705 aa30.49■■■□□ 2.47
GGA2-205ENST00000563494 CDK19Q9BWU1 502 aa30.49■■■□□ 2.47
GGA2-205ENST00000563494 ITSN1Q15811 1721 aa30.49■■■□□ 2.47
GGA2-205ENST00000563494 RALGAPBQ86X10 1494 aa30.49■■■□□ 2.47
GGA2-205ENST00000563494 PLCH1Q4KWH8 1693 aa30.49■■■□□ 2.47
GGA2-205ENST00000563494 TOPAZ1Q8N9V7 1692 aa30.48■■■□□ 2.47
GGA2-205ENST00000563494 GPRASP1Q5JY77 1395 aa30.47■■■□□ 2.47
GGA2-205ENST00000563494 FAM83GA6ND36 823 aa30.47■■■□□ 2.47
GGA2-205ENST00000563494 SIN3AQ96ST3 1273 aa30.46■■■□□ 2.47
GGA2-205ENST00000563494 POLR3AO14802 1390 aaPredicted RBP30.45■■■□□ 2.47
GGA2-205ENST00000563494 LMOD2Q6P5Q4 547 aa30.45■■■□□ 2.47
GGA2-205ENST00000563494 ATAD2Q6PL18 1390 aa30.44■■■□□ 2.46
GGA2-205ENST00000563494 ONECUT3O60422 494 aaPredicted RBP30.43■■■□□ 2.46
GGA2-205ENST00000563494 VPS72Q15906 364 aa30.43■■■□□ 2.46
GGA2-205ENST00000563494 NGDNQ8NEJ9 315 aaKnown RBP30.43■■■□□ 2.46
GGA2-205ENST00000563494 PLEKHG3A1L390 1219 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms