RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 KNDC1Q76NI1 1749 aa24.74■■□□□ 1.55
TNRC6A-209ENST00000562829 WAPLQ7Z5K2 1190 aa24.73■■□□□ 1.55
TNRC6A-209ENST00000562829 PNPLA6Q8IY17 1366 aa24.72■■□□□ 1.55
TNRC6A-209ENST00000562829 MYOM2P54296 1465 aa24.71■■□□□ 1.55
TNRC6A-209ENST00000562829 YTHDC2Q9H6S0 1430 aaKnown RBP24.71■■□□□ 1.55
TNRC6A-209ENST00000562829 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
TNRC6A-209ENST00000562829 LAMC1P11047 1609 aa24.7■■□□□ 1.54
TNRC6A-209ENST00000562829 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
TNRC6A-209ENST00000562829 ESCO1Q5FWF5 840 aa24.69■■□□□ 1.54
TNRC6A-209ENST00000562829 NUTM2FA1L443 756 aa24.68■■□□□ 1.54
TNRC6A-209ENST00000562829 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
TNRC6A-209ENST00000562829 NRXN1Q9ULB1 1477 aa24.68■■□□□ 1.54
TNRC6A-209ENST00000562829 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
TNRC6A-209ENST00000562829 CFAP70Q5T0N1 1121 aa24.67■■□□□ 1.54
TNRC6A-209ENST00000562829 AFF2P51816 1311 aa24.66■■□□□ 1.54
TNRC6A-209ENST00000562829 DHX57Q6P158 1386 aaKnown RBP24.66■■□□□ 1.54
TNRC6A-209ENST00000562829 C8orf37Q96NL8 207 aa24.65■■□□□ 1.54
TNRC6A-209ENST00000562829 NPHP3Q7Z494 1330 aa24.64■■□□□ 1.54
TNRC6A-209ENST00000562829 ADAMTS2O95450 1211 aa24.62■■□□□ 1.53
TNRC6A-209ENST00000562829 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
TNRC6A-209ENST00000562829 FOXO3O43524 673 aa24.6■■□□□ 1.53
TNRC6A-209ENST00000562829 HRCP23327 699 aa24.6■■□□□ 1.53
TNRC6A-209ENST00000562829 RXRBP28702 533 aa24.6■■□□□ 1.53
TNRC6A-209ENST00000562829 XPCQ01831 940 aaPredicted RBP24.6■■□□□ 1.53
TNRC6A-209ENST00000562829 KDM2AQ9Y2K7 1162 aa24.6■■□□□ 1.53
TNRC6A-209ENST00000562829 SIRT1Q96EB6 747 aa24.59■■□□□ 1.53
TNRC6A-209ENST00000562829 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
TNRC6A-209ENST00000562829 DCAF11Q8TEB1 546 aa24.57■■□□□ 1.52
TNRC6A-209ENST00000562829 NGLY1Q96IV0 654 aa24.57■■□□□ 1.52
TNRC6A-209ENST00000562829 PRAM1Q96QH2 718 aa24.57■■□□□ 1.52
TNRC6A-209ENST00000562829 PXDNQ92626 1479 aa24.57■■□□□ 1.52
TNRC6A-209ENST00000562829 POGKQ9P215 609 aa24.55■■□□□ 1.52
TNRC6A-209ENST00000562829 KIF1AQ12756 1690 aa24.55■■□□□ 1.52
TNRC6A-209ENST00000562829 COL22A1Q8NFW1 1626 aaPredicted RBP24.54■■□□□ 1.52
TNRC6A-209ENST00000562829 DLC1Q96QB1 1528 aa24.53■■□□□ 1.52
TNRC6A-209ENST00000562829 ADGRB1O14514 1584 aa24.52■■□□□ 1.52
TNRC6A-209ENST00000562829 QTRT2Q9H974 415 aaKnown RBP24.52■■□□□ 1.52
TNRC6A-209ENST00000562829 TRAK1Q9UPV9 953 aa24.52■■□□□ 1.52
TNRC6A-209ENST00000562829 RGPD8O14715 1765 aaPredicted RBP24.51■■□□□ 1.51
TNRC6A-209ENST00000562829 CDK12Q9NYV4 1490 aaPredicted RBP24.5■■□□□ 1.51
TNRC6A-209ENST00000562829 RBM6P78332 1123 aaKnown RBP24.48■■□□□ 1.51
TNRC6A-209ENST00000562829 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
TNRC6A-209ENST00000562829 USP21Q9UK80 565 aa24.48■■□□□ 1.51
TNRC6A-209ENST00000562829 PHF8Q9UPP1 1060 aa24.48■■□□□ 1.51
TNRC6A-209ENST00000562829 KRT28Q7Z3Y7 464 aa24.46■■□□□ 1.51
TNRC6A-209ENST00000562829 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
TNRC6A-209ENST00000562829 ADGRB2O60241 1585 aa24.45■■□□□ 1.5
TNRC6A-209ENST00000562829 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
TNRC6A-209ENST00000562829 MINK1Q8N4C8 1332 aaPredicted RBP24.44■■□□□ 1.5
TNRC6A-209ENST00000562829 MARF1Q9Y4F3 1742 aaKnown RBP24.44■■□□□ 1.5
TNRC6A-209ENST00000562829 RGS12O14924 1447 aa24.44■■□□□ 1.5
TNRC6A-209ENST00000562829 PSME1Q06323 249 aa24.42■■□□□ 1.5
TNRC6A-209ENST00000562829 FNBP4Q8N3X1 1017 aaPredicted RBP24.42■■□□□ 1.5
TNRC6A-209ENST00000562829 TRPC5Q9UL62 973 aaPredicted RBP24.42■■□□□ 1.5
TNRC6A-209ENST00000562829 ANKARQ7Z5J8 1434 aa24.42■■□□□ 1.5
TNRC6A-209ENST00000562829 UPF1Q92900 1129 aaKnown RBP eCLIP24.41■■□□□ 1.5
TNRC6A-209ENST00000562829 USP32Q8NFA0 1604 aa24.41■■□□□ 1.5
TNRC6A-209ENST00000562829 TNS3Q68CZ2 1445 aa24.41■■□□□ 1.5
TNRC6A-209ENST00000562829 HAP1P54257 671 aaPredicted RBP24.4■■□□□ 1.5
TNRC6A-209ENST00000562829 PMFBP1Q8TBY8 1022 aa24.4■■□□□ 1.5
TNRC6A-209ENST00000562829 PLEKHG5O94827 1062 aa24.39■■□□□ 1.49
TNRC6A-209ENST00000562829 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.49
TNRC6A-209ENST00000562829 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.49
TNRC6A-209ENST00000562829 ARHGEF28Q8N1W1 1705 aaKnown RBP24.37■■□□□ 1.49
TNRC6A-209ENST00000562829 ATRNO75882 1429 aa24.36■■□□□ 1.49
TNRC6A-209ENST00000562829 TULP4Q9NRJ4 1543 aa24.35■■□□□ 1.49
TNRC6A-209ENST00000562829 SBNO1A3KN83 1393 aa24.35■■□□□ 1.49
TNRC6A-209ENST00000562829 WASLO00401 505 aaPredicted RBP24.35■■□□□ 1.49
TNRC6A-209ENST00000562829 BCL9LQ86UU0 1499 aa24.33■■□□□ 1.49
TNRC6A-209ENST00000562829 ARHGEF10O15013 1369 aa24.33■■□□□ 1.49
TNRC6A-209ENST00000562829 CABLES1Q8TDN4 633 aa24.33■■□□□ 1.49
TNRC6A-209ENST00000562829 PRR36Q9H6K5 1346 aa24.33■■□□□ 1.48
TNRC6A-209ENST00000562829 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
TNRC6A-209ENST00000562829 KIAA1210Q9ULL0 1709 aa24.31■■□□□ 1.48
TNRC6A-209ENST00000562829 ABCA3Q99758 1704 aa24.29■■□□□ 1.48
TNRC6A-209ENST00000562829 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.29■■□□□ 1.48
TNRC6A-209ENST00000562829 UNC5CLQ8IV45 518 aa24.28■■□□□ 1.48
TNRC6A-209ENST00000562829 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
TNRC6A-209ENST00000562829 SLIT2O94813 1529 aa24.28■■□□□ 1.48
TNRC6A-209ENST00000562829 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
TNRC6A-209ENST00000562829 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
TNRC6A-209ENST00000562829 GJD4Q96KN9 370 aaPredicted RBP24.27■■□□□ 1.48
TNRC6A-209ENST00000562829 ATAD2Q6PL18 1390 aa24.27■■□□□ 1.48
TNRC6A-209ENST00000562829 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
TNRC6A-209ENST00000562829 ATP7BP35670 1465 aa24.25■■□□□ 1.47
TNRC6A-209ENST00000562829 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
TNRC6A-209ENST00000562829 PLCH1Q4KWH8 1693 aa24.24■■□□□ 1.47
TNRC6A-209ENST00000562829 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
TNRC6A-209ENST00000562829 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
TNRC6A-209ENST00000562829 CDK19Q9BWU1 502 aa24.22■■□□□ 1.47
TNRC6A-209ENST00000562829 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
TNRC6A-209ENST00000562829 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
TNRC6A-209ENST00000562829 GLI3P10071 1580 aa24.2■■□□□ 1.47
TNRC6A-209ENST00000562829 NWD2Q9ULI1 1742 aa24.2■■□□□ 1.46
TNRC6A-209ENST00000562829 SIN3AQ96ST3 1273 aa24.19■■□□□ 1.46
TNRC6A-209ENST00000562829 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
TNRC6A-209ENST00000562829 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
TNRC6A-209ENST00000562829 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
TNRC6A-209ENST00000562829 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
TNRC6A-209ENST00000562829 VPS72Q15906 364 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms