RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 NPATQ14207 1427 aa22.89■■□□□ 1.25
AC009041.2-203ENST00000562570 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
AC009041.2-203ENST00000562570 POGZQ7Z3K3 1410 aa22.88■■□□□ 1.25
AC009041.2-203ENST00000562570 E9PSI1 815 aa22.88■■□□□ 1.25
AC009041.2-203ENST00000562570 IQGAP3Q86VI3 1631 aa22.88■■□□□ 1.25
AC009041.2-203ENST00000562570 UNC13BO14795 1591 aa22.86■■□□□ 1.25
AC009041.2-203ENST00000562570 SLKQ9H2G2 1235 aaPredicted RBP22.86■■□□□ 1.25
AC009041.2-203ENST00000562570 MAPK8IP3Q9UPT6 1336 aa22.86■■□□□ 1.25
AC009041.2-203ENST00000562570 SMC4Q9NTJ3 1288 aa22.85■■□□□ 1.25
AC009041.2-203ENST00000562570 RUNDC1Q96C34 613 aa22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 EXOSC9Q06265 439 aaKnown RBP22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 ITPRIPQ8IWB1 547 aa22.84■■□□□ 1.25
AC009041.2-203ENST00000562570 RRS1Q15050 365 aaKnown RBP22.83■■□□□ 1.24
AC009041.2-203ENST00000562570 RBM33Q96EV2 1170 aaKnown RBP22.82■■□□□ 1.24
AC009041.2-203ENST00000562570 SEC24BO95487 1268 aa22.82■■□□□ 1.24
AC009041.2-203ENST00000562570 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
AC009041.2-203ENST00000562570 RIPK4P57078 832 aa22.82■■□□□ 1.24
AC009041.2-203ENST00000562570 CEBPAP49715 358 aaPredicted RBP22.81■■□□□ 1.24
AC009041.2-203ENST00000562570 CENPQQ7L2Z9 268 aaPredicted RBP22.8■■□□□ 1.24
AC009041.2-203ENST00000562570 BLMP54132 1417 aaPredicted RBP22.8■■□□□ 1.24
AC009041.2-203ENST00000562570 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
AC009041.2-203ENST00000562570 ZBTB7CA1YPR0 619 aa22.79■■□□□ 1.24
AC009041.2-203ENST00000562570 APBB1O00213 710 aa22.79■■□□□ 1.24
AC009041.2-203ENST00000562570 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
AC009041.2-203ENST00000562570 C1orf115Q9H7X2 142 aa22.79■■□□□ 1.24
AC009041.2-203ENST00000562570 PCDHB15Q9Y5E8 787 aa22.78■■□□□ 1.24
AC009041.2-203ENST00000562570 PTPRTO14522 1441 aa22.78■■□□□ 1.24
AC009041.2-203ENST00000562570 EMILIN1Q9Y6C2 1016 aa22.77■■□□□ 1.24
AC009041.2-203ENST00000562570 RARSP54136 660 aaKnown RBP22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 ARAP3Q8WWN8 1544 aa22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 ZNF521Q96K83 1311 aa22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 FYB1O15117 783 aa22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 NUTM2GQ5VZR2 741 aa22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 MADDQ8WXG6 1647 aa22.76■■□□□ 1.23
AC009041.2-203ENST00000562570 TRPM2O94759 1503 aa22.75■■□□□ 1.23
AC009041.2-203ENST00000562570 KIDINS220Q9ULH0 1771 aa22.75■■□□□ 1.23
AC009041.2-203ENST00000562570 SLC26A8Q96RN1 970 aa22.75■■□□□ 1.23
AC009041.2-203ENST00000562570 NME9Q86XW9 330 aa22.74■■□□□ 1.23
AC009041.2-203ENST00000562570 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
AC009041.2-203ENST00000562570 PRKAR2BP31323 418 aa22.73■■□□□ 1.23
AC009041.2-203ENST00000562570 C14orf37Q86TY3 774 aa22.73■■□□□ 1.23
AC009041.2-203ENST00000562570 EIF2AK4Q9P2K8 1649 aaKnown RBP22.73■■□□□ 1.23
AC009041.2-203ENST00000562570 FAM161AQ3B820 660 aa22.72■■□□□ 1.23
AC009041.2-203ENST00000562570 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
AC009041.2-203ENST00000562570 NEO1Q92859 1461 aa22.72■■□□□ 1.23
AC009041.2-203ENST00000562570 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
AC009041.2-203ENST00000562570 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
AC009041.2-203ENST00000562570 ZMYM4Q5VZL5 1548 aa22.71■■□□□ 1.23
AC009041.2-203ENST00000562570 A0A1W2PP64 1363 aa22.7■■□□□ 1.22
AC009041.2-203ENST00000562570 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 C8orf34Q49A92 452 aa22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 SPHKAPQ2M3C7 1700 aa22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 PMFBP1Q8TBY8 1022 aa22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 INO80Q9ULG1 1556 aaPredicted RBP22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 SSH1Q8WYL5 1049 aa22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 NOB1Q9ULX3 412 aaKnown RBP22.69■■□□□ 1.22
AC009041.2-203ENST00000562570 STAC3Q96MF2 364 aa22.68■■□□□ 1.22
AC009041.2-203ENST00000562570 TMPOP42166 694 aaKnown RBP22.68■■□□□ 1.22
AC009041.2-203ENST00000562570 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
AC009041.2-203ENST00000562570 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
AC009041.2-203ENST00000562570 CEP152O94986 1710 aa22.67■■□□□ 1.22
AC009041.2-203ENST00000562570 KDM2BQ8NHM5 1336 aa22.67■■□□□ 1.22
AC009041.2-203ENST00000562570 PDZRN3Q9UPQ7 1066 aa22.67■■□□□ 1.22
AC009041.2-203ENST00000562570 MLH3Q9UHC1 1453 aa22.66■■□□□ 1.22
AC009041.2-203ENST00000562570 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
AC009041.2-203ENST00000562570 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
AC009041.2-203ENST00000562570 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
AC009041.2-203ENST00000562570 MS4A1P11836 297 aa22.65■■□□□ 1.22
AC009041.2-203ENST00000562570 ABCA6Q8N139 1617 aa22.64■■□□□ 1.22
AC009041.2-203ENST00000562570 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.21
AC009041.2-203ENST00000562570 KRT24Q2M2I5 525 aa22.64■■□□□ 1.21
AC009041.2-203ENST00000562570 LTV1Q96GA3 475 aaPredicted RBP22.63■■□□□ 1.21
AC009041.2-203ENST00000562570 LNPKQ9C0E8 428 aa22.63■■□□□ 1.21
AC009041.2-203ENST00000562570 FOXD4L1Q9NU39 408 aa22.63■■□□□ 1.21
AC009041.2-203ENST00000562570 FRAT2O75474 233 aaPredicted RBP22.63■■□□□ 1.21
AC009041.2-203ENST00000562570 PPRC1Q5VV67 1664 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-203ENST00000562570 DZIP1LQ8IYY4 767 aaKnown RBP22.62■■□□□ 1.21
AC009041.2-203ENST00000562570 PIK3C2GO75747 1445 aa22.62■■□□□ 1.21
AC009041.2-203ENST00000562570 MAP3K4Q9Y6R4 1608 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 TSPYL6Q8N831 410 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 TRIM27P14373 513 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 ZKSCAN2Q63HK3 967 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
AC009041.2-203ENST00000562570 IL27Q8NEV9 243 aa22.6■■□□□ 1.21
AC009041.2-203ENST00000562570 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
AC009041.2-203ENST00000562570 TRMT2AQ8IZ69 625 aaKnown RBP22.59■■□□□ 1.21
AC009041.2-203ENST00000562570 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
AC009041.2-203ENST00000562570 MROH2AA6NES4 1674 aa22.58■■□□□ 1.21
AC009041.2-203ENST00000562570 TET3O43151 1660 aa22.58■■□□□ 1.21
AC009041.2-203ENST00000562570 NFKBIBQ15653 356 aa22.58■■□□□ 1.2
AC009041.2-203ENST00000562570 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.2
AC009041.2-203ENST00000562570 AEBP1Q8IUX7 1158 aa22.57■■□□□ 1.2
AC009041.2-203ENST00000562570 EFCAB6Q5THR3 1501 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms