RNA–Protein interactions for RNA: ENST00000561886.1

SMIM1-203, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2 BASIC

Gene SMIM1, Length 491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-203ENST00000561886 FNBP4Q8N3X1 1017 aaPredicted RBP29.19■■■□□ 2.26
SMIM1-203ENST00000561886 FOXD1Q16676 465 aa29.18■■■□□ 2.26
SMIM1-203ENST00000561886 PRAG1Q86YV5 1406 aa29.18■■■□□ 2.26
SMIM1-203ENST00000561886 NUTM2FA1L443 756 aa29.17■■■□□ 2.26
SMIM1-203ENST00000561886 PPLO60437 1756 aa29.16■■■□□ 2.26
SMIM1-203ENST00000561886 STK26Q9P289 416 aa29.16■■■□□ 2.26
SMIM1-203ENST00000561886 NPHP3Q7Z494 1330 aa29.16■■■□□ 2.26
SMIM1-203ENST00000561886 FOXO3O43524 673 aa29.15■■■□□ 2.26
SMIM1-203ENST00000561886 ATRNO75882 1429 aa29.14■■■□□ 2.26
SMIM1-203ENST00000561886 COL22A1Q8NFW1 1626 aaPredicted RBP29.13■■■□□ 2.25
SMIM1-203ENST00000561886 SRCAPQ6ZRS2 3230 aa29.13■■■□□ 2.25
SMIM1-203ENST00000561886 ADGRF5Q8IZF2 1346 aa29.13■■■□□ 2.25
SMIM1-203ENST00000561886 MYOM2P54296 1465 aa29.12■■■□□ 2.25
SMIM1-203ENST00000561886 WAPLQ7Z5K2 1190 aa29.12■■■□□ 2.25
SMIM1-203ENST00000561886 CDC42BPGQ6DT37 1551 aa29.11■■■□□ 2.25
SMIM1-203ENST00000561886 RGL3Q3MIN7 710 aa29.11■■■□□ 2.25
SMIM1-203ENST00000561886 PXDNQ92626 1479 aa29.1■■■□□ 2.25
SMIM1-203ENST00000561886 BCL9LQ86UU0 1499 aa29.08■■■□□ 2.25
SMIM1-203ENST00000561886 TMEM132EQ6IEE7 984 aa29.06■■■□□ 2.24
SMIM1-203ENST00000561886 PLEKHH1Q9ULM0 1364 aa29.03■■■□□ 2.24
SMIM1-203ENST00000561886 GJD4Q96KN9 370 aaPredicted RBP29.03■■■□□ 2.24
SMIM1-203ENST00000561886 ZRANB1Q9UGI0 708 aa29.03■■■□□ 2.24
SMIM1-203ENST00000561886 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
SMIM1-203ENST00000561886 LRPPRCP42704 1394 aaKnown RBP29.02■■■□□ 2.24
SMIM1-203ENST00000561886 EP400Q96L91 3159 aa29.02■■■□□ 2.24
SMIM1-203ENST00000561886 MARF1Q9Y4F3 1742 aaKnown RBP29■■■□□ 2.23
SMIM1-203ENST00000561886 TECPR2O15040 1411 aa28.99■■■□□ 2.23
SMIM1-203ENST00000561886 SPATA31E1Q6ZUB1 1445 aa28.97■■■□□ 2.23
SMIM1-203ENST00000561886 PLEKHG5O94827 1062 aa28.97■■■□□ 2.23
SMIM1-203ENST00000561886 ABCC11Q96J66 1382 aa28.97■■■□□ 2.23
SMIM1-203ENST00000561886 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
SMIM1-203ENST00000561886 SPATA31A3Q5VYP0 1347 aa28.95■■■□□ 2.23
SMIM1-203ENST00000561886 KRT28Q7Z3Y7 464 aa28.95■■■□□ 2.22
SMIM1-203ENST00000561886 CCDC125Q86Z20 511 aa28.95■■■□□ 2.22
SMIM1-203ENST00000561886 UNC5CLQ8IV45 518 aa28.95■■■□□ 2.22
SMIM1-203ENST00000561886 MPHOSPH9Q99550 1183 aa28.93■■■□□ 2.22
SMIM1-203ENST00000561886 RALGAPBQ86X10 1494 aa28.92■■■□□ 2.22
SMIM1-203ENST00000561886 HAP1P54257 671 aaPredicted RBP28.92■■■□□ 2.22
SMIM1-203ENST00000561886 YTHDC2Q9H6S0 1430 aaKnown RBP28.92■■■□□ 2.22
SMIM1-203ENST00000561886 FMN2Q9NZ56 1722 aa28.91■■■□□ 2.22
SMIM1-203ENST00000561886 IFT172Q9UG01 1749 aa28.91■■■□□ 2.22
SMIM1-203ENST00000561886 PIK3C2GO75747 1445 aa28.91■■■□□ 2.22
SMIM1-203ENST00000561886 SLIT2O94813 1529 aa28.9■■■□□ 2.22
SMIM1-203ENST00000561886 CABLES1Q8TDN4 633 aa28.9■■■□□ 2.22
SMIM1-203ENST00000561886 KNDC1Q76NI1 1749 aa28.89■■■□□ 2.22
SMIM1-203ENST00000561886 GLI3P10071 1580 aa28.89■■■□□ 2.22
SMIM1-203ENST00000561886 KIF1AQ12756 1690 aa28.88■■■□□ 2.21
SMIM1-203ENST00000561886 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.88■■■□□ 2.21
SMIM1-203ENST00000561886 PHF8Q9UPP1 1060 aa28.87■■■□□ 2.21
SMIM1-203ENST00000561886 SAFB2Q14151 953 aaKnown RBP eCLIP28.86■■■□□ 2.21
SMIM1-203ENST00000561886 LMOD2Q6P5Q4 547 aa28.86■■■□□ 2.21
SMIM1-203ENST00000561886 USP32Q8NFA0 1604 aa28.85■■■□□ 2.21
SMIM1-203ENST00000561886 CCDC9Q9Y3X0 531 aaKnown RBP28.84■■■□□ 2.21
SMIM1-203ENST00000561886 PSME1Q06323 249 aa28.83■■■□□ 2.21
SMIM1-203ENST00000561886 CFAP70Q5T0N1 1121 aa28.83■■■□□ 2.21
SMIM1-203ENST00000561886 DEFB132Q7Z7B7 95 aa28.83■■■□□ 2.21
SMIM1-203ENST00000561886 SEPT12Q8IYM1 358 aa28.83■■■□□ 2.21
SMIM1-203ENST00000561886 BLMP54132 1417 aaPredicted RBP28.83■■■□□ 2.21
SMIM1-203ENST00000561886 TNS3Q68CZ2 1445 aa28.83■■■□□ 2.21
SMIM1-203ENST00000561886 C14orf93Q9H972 538 aaKnown RBP28.82■■■□□ 2.2
SMIM1-203ENST00000561886 RGPD8O14715 1765 aaPredicted RBP28.82■■■□□ 2.2
SMIM1-203ENST00000561886 SIRT1Q96EB6 747 aa28.81■■■□□ 2.2
SMIM1-203ENST00000561886 PRAM1Q96QH2 718 aa28.8■■■□□ 2.2
SMIM1-203ENST00000561886 BRWD3Q6RI45 1802 aa28.8■■■□□ 2.2
SMIM1-203ENST00000561886 VPS72Q15906 364 aa28.79■■■□□ 2.2
SMIM1-203ENST00000561886 DHX57Q6P158 1386 aaKnown RBP28.78■■■□□ 2.2
SMIM1-203ENST00000561886 SF3B2Q13435 895 aaKnown RBP28.78■■■□□ 2.2
SMIM1-203ENST00000561886 PMFBP1Q8TBY8 1022 aa28.77■■■□□ 2.2
SMIM1-203ENST00000561886 NRXN1Q9ULB1 1477 aa28.74■■■□□ 2.19
SMIM1-203ENST00000561886 POGKQ9P215 609 aa28.74■■■□□ 2.19
SMIM1-203ENST00000561886 SBNO1A3KN83 1393 aa28.74■■■□□ 2.19
SMIM1-203ENST00000561886 PLCH1Q4KWH8 1693 aa28.74■■■□□ 2.19
SMIM1-203ENST00000561886 A0A0G2JS52 829 aa28.73■■■□□ 2.19
SMIM1-203ENST00000561886 MYT1Q01538 1121 aa28.73■■■□□ 2.19
SMIM1-203ENST00000561886 FAM83GA6ND36 823 aa28.72■■■□□ 2.19
SMIM1-203ENST00000561886 KRT27Q7Z3Y8 459 aa28.72■■■□□ 2.19
SMIM1-203ENST00000561886 ARHGEF10O15013 1369 aa28.72■■■□□ 2.19
SMIM1-203ENST00000561886 ABCA3Q99758 1704 aa28.69■■■□□ 2.18
SMIM1-203ENST00000561886 ONECUT3O60422 494 aaPredicted RBP28.69■■■□□ 2.18
SMIM1-203ENST00000561886 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
SMIM1-203ENST00000561886 NWD2Q9ULI1 1742 aa28.69■■■□□ 2.18
SMIM1-203ENST00000561886 FAM98CQ17RN3 349 aaKnown RBP28.66■■■□□ 2.18
SMIM1-203ENST00000561886 BTG4Q9NY30 223 aa28.65■■■□□ 2.18
SMIM1-203ENST00000561886 TRAK1Q9UPV9 953 aa28.65■■■□□ 2.18
SMIM1-203ENST00000561886 ANKARQ7Z5J8 1434 aa28.64■■■□□ 2.18
SMIM1-203ENST00000561886 MINK1Q8N4C8 1332 aaPredicted RBP28.63■■■□□ 2.17
SMIM1-203ENST00000561886 DLC1Q96QB1 1528 aa28.61■■■□□ 2.17
SMIM1-203ENST00000561886 PSDA5PKW4 1024 aaPredicted RBP28.61■■■□□ 2.17
SMIM1-203ENST00000561886 GPRASP1Q5JY77 1395 aa28.6■■■□□ 2.17
SMIM1-203ENST00000561886 BAG6P46379 1132 aa28.59■■■□□ 2.17
SMIM1-203ENST00000561886 FAM182BQ5T319 152 aa28.59■■■□□ 2.17
SMIM1-203ENST00000561886 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
SMIM1-203ENST00000561886 KDM2AQ9Y2K7 1162 aa28.58■■■□□ 2.17
SMIM1-203ENST00000561886 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
SMIM1-203ENST00000561886 ADGRB2O60241 1585 aa28.57■■■□□ 2.16
SMIM1-203ENST00000561886 NRAPQ86VF7 1730 aa28.57■■■□□ 2.16
SMIM1-203ENST00000561886 TRPM3Q9HCF6 1732 aaPredicted RBP28.57■■■□□ 2.16
SMIM1-203ENST00000561886 PAK3O75914 559 aaPredicted RBP28.56■■■□□ 2.16
SMIM1-203ENST00000561886 ADGRB1O14514 1584 aa28.55■■■□□ 2.16
SMIM1-203ENST00000561886 NGDNQ8NEJ9 315 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms