RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	FXR2	P51116	673 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
ZEB1-222	ENST00000561212	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.23	□□□□□ -0.77
ZEB1-222	ENST00000561212	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.22	□□□□□ -0.77
ZEB1-222	ENST00000561212	MED14	O60244	1454 aa		10.22	□□□□□ -0.77
ZEB1-222	ENST00000561212	SETD1B	Q9UPS6	1966 aa	Known RBP	10.22	□□□□□ -0.77
ZEB1-222	ENST00000561212	TMEM132E	Q6IEE7	984 aa		10.22	□□□□□ -0.77
ZEB1-222	ENST00000561212	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.22	□□□□□ -0.77
ZEB1-222	ENST00000561212	LTK	P29376	864 aa		10.2	□□□□□ -0.78
ZEB1-222	ENST00000561212	ADAMTS13	Q76LX8	1427 aa		10.2	□□□□□ -0.78
ZEB1-222	ENST00000561212	ZNF142	P52746	1687 aa	Predicted RBP	10.2	□□□□□ -0.78
ZEB1-222	ENST00000561212	EIF3A	Q14152	1382 aa	Known RBP	10.19	□□□□□ -0.78
ZEB1-222	ENST00000561212	PER1	O15534	1290 aa	Predicted RBP	10.19	□□□□□ -0.78
ZEB1-222	ENST00000561212	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
ZEB1-222	ENST00000561212	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.19	□□□□□ -0.78
ZEB1-222	ENST00000561212	MKRN4P	Q13434	485 aa	Predicted RBP	10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	STAG3	Q9UJ98	1225 aa		10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	DLC1	Q96QB1	1528 aa		10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	MYOM1	P52179	1685 aa		10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	QRICH2	Q9H0J4	1663 aa		10.18	□□□□□ -0.78
ZEB1-222	ENST00000561212	TMF1	P82094	1093 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	ABCC11	Q96J66	1382 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	PLEKHG1	Q9ULL1	1385 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	SLC24A1	O60721	1099 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	TRAK1	Q9UPV9	953 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	TECPR2	O15040	1411 aa		10.17	□□□□□ -0.78
ZEB1-222	ENST00000561212	MET	P08581	1390 aa		10.16	□□□□□ -0.78
ZEB1-222	ENST00000561212	LRPPRC	P42704	1394 aa	Known RBP	10.16	□□□□□ -0.78
ZEB1-222	ENST00000561212	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.16	□□□□□ -0.78
ZEB1-222	ENST00000561212	KTN1	Q86UP2	1357 aa	Known RBP	10.16	□□□□□ -0.78
ZEB1-222	ENST00000561212	HDGF	P51858	240 aa	Known RBP	10.15	□□□□□ -0.78
ZEB1-222	ENST00000561212	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.15	□□□□□ -0.78
ZEB1-222	ENST00000561212	PUS7	Q96PZ0	661 aa	Known RBP	10.15	□□□□□ -0.78
ZEB1-222	ENST00000561212	TULP4	Q9NRJ4	1543 aa		10.15	□□□□□ -0.78
ZEB1-222	ENST00000561212	KNDC1	Q76NI1	1749 aa		10.15	□□□□□ -0.79
ZEB1-222	ENST00000561212	SIRT1	Q96EB6	747 aa		10.14	□□□□□ -0.79
ZEB1-222	ENST00000561212	ZNF692	Q9BU19	519 aa	Predicted RBP	10.14	□□□□□ -0.79
ZEB1-222	ENST00000561212	TXNDC2	Q86VQ3	553 aa		10.13	□□□□□ -0.79
ZEB1-222	ENST00000561212	CPS1	P31327	1500 aa		10.13	□□□□□ -0.79
ZEB1-222	ENST00000561212	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	MRS2	Q9HD23	443 aa		10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	FAM135B	Q49AJ0	1406 aa		10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	CDCA8	Q53HL2	280 aa		10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	CLEC11A	Q9Y240	323 aa		10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	TBX22	Q9Y458	520 aa		10.12	□□□□□ -0.79
ZEB1-222	ENST00000561212	PTPRU	Q92729	1446 aa		10.11	□□□□□ -0.79
ZEB1-222	ENST00000561212	DIP2A	Q14689	1571 aa		10.11	□□□□□ -0.79
ZEB1-222	ENST00000561212	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
ZEB1-222	ENST00000561212	CCDC184	Q52MB2	194 aa		10.11	□□□□□ -0.79
ZEB1-222	ENST00000561212	POLR3GL	Q9BT43	218 aa		10.11	□□□□□ -0.79
ZEB1-222	ENST00000561212	PLEKHH1	Q9ULM0	1364 aa		10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	RALBP1	Q15311	655 aa		10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	PRAM1	Q96QH2	718 aa		10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	PANK3	Q9H999	370 aa		10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	SSUH2	Q9Y2M2	353 aa		10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.1	□□□□□ -0.79
ZEB1-222	ENST00000561212	KDM4F	A0A1W2PPD8	638 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	XRN1	Q8IZH2	1706 aa	Known RBP	10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	STK26	Q9P289	416 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	EID1	Q9Y6B2	187 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	PARD3	Q8TEW0	1356 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	ROBO2	Q9HCK4	1378 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	NPC1L1	Q9UHC9	1359 aa		10.09	□□□□□ -0.79
ZEB1-222	ENST00000561212	PIK3R4	Q99570	1358 aa		10.08	□□□□□ -0.8
ZEB1-222	ENST00000561212	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	WAPL	Q7Z5K2	1190 aa		10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	CARD14	Q9BXL6	1004 aa		10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	ZBED9	Q6R2W3	1325 aa		10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	BRD4	O60885	1362 aa	Predicted RBP	10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	GABBR2	O75899	941 aa		10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	SLC26A8	Q96RN1	970 aa		10.07	□□□□□ -0.8
ZEB1-222	ENST00000561212	EVC2	Q86UK5	1308 aa		10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	ADGRB2	O60241	1585 aa		10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	PTCH1	Q13635	1447 aa		10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	CD163L1	Q9NR16	1453 aa		10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	CHD2	O14647	1828 aa	Known RBP	10.06	□□□□□ -0.8
ZEB1-222	ENST00000561212	PRKAR2A	P13861	404 aa	Known RBP	10.05	□□□□□ -0.8
ZEB1-222	ENST00000561212	ANKLE2	Q86XL3	938 aa		10.05	□□□□□ -0.8
ZEB1-222	ENST00000561212	FAM9B	Q8IZU0	186 aa		10.05	□□□□□ -0.8
ZEB1-222	ENST00000561212	SLC12A5	Q9H2X9	1139 aa		10.05	□□□□□ -0.8
ZEB1-222	ENST00000561212	USP32	Q8NFA0	1604 aa		10.04	□□□□□ -0.8
ZEB1-222	ENST00000561212	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
ZEB1-222	ENST00000561212	POGK	Q9P215	609 aa		10.04	□□□□□ -0.8
ZEB1-222	ENST00000561212	NEFL	P07196	543 aa		10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	NLRP13	Q86W25	1043 aa		10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	PNISR	Q8TF01	805 aa	Known RBP	10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	CABP2	Q9NPB3	220 aa		10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	NINL	Q9Y2I6	1382 aa		10.03	□□□□□ -0.8
ZEB1-222	ENST00000561212	TMC1	Q8TDI8	760 aa		10.02	□□□□□ -0.8
ZEB1-222	ENST00000561212	CDK19	Q9BWU1	502 aa		10.02	□□□□□ -0.8
ZEB1-222	ENST00000561212	AMOTL2	Q9Y2J4	779 aa		10.02	□□□□□ -0.8
ZEB1-222	ENST00000561212	ATAD2	Q6PL18	1390 aa		10.02	□□□□□ -0.8
ZEB1-222	ENST00000561212	ANKRD36B	Q8N2N9	1353 aa		10.02	□□□□□ -0.8
ZEB1-222	ENST00000561212	NPHP4	O75161	1426 aa	Predicted RBP	10.02	□□□□□ -0.81
ZEB1-222	ENST00000561212	INSR	P06213	1382 aa		10.02	□□□□□ -0.81
ZEB1-222	ENST00000561212	WASL	O00401	505 aa	Predicted RBP	10.02	□□□□□ -0.81
ZEB1-222	ENST00000561212	ATP7B	P35670	1465 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms