RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
USP8-209ENST00000560297 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
USP8-209ENST00000560297 PLEKHH1Q9ULM0 1364 aa17.27■□□□□ 0.35
USP8-209ENST00000560297 MSH6P52701 1360 aa17.26■□□□□ 0.35
USP8-209ENST00000560297 USP47Q96K76 1375 aa17.26■□□□□ 0.35
USP8-209ENST00000560297 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
USP8-209ENST00000560297 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
USP8-209ENST00000560297 ATF3P18847 181 aa17.25■□□□□ 0.35
USP8-209ENST00000560297 CADPS2Q86UW7 1296 aa17.24■□□□□ 0.35
USP8-209ENST00000560297 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
USP8-209ENST00000560297 ADGRL3Q9HAR2 1447 aa17.23■□□□□ 0.35
USP8-209ENST00000560297 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
USP8-209ENST00000560297 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.35
USP8-209ENST00000560297 TOM1O60784 492 aa17.21■□□□□ 0.35
USP8-209ENST00000560297 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
USP8-209ENST00000560297 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.35
USP8-209ENST00000560297 DCCP43146 1447 aa17.21■□□□□ 0.34
USP8-209ENST00000560297 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
USP8-209ENST00000560297 TESK2Q96S53 571 aa17.2■□□□□ 0.34
USP8-209ENST00000560297 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
USP8-209ENST00000560297 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
USP8-209ENST00000560297 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
USP8-209ENST00000560297 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
USP8-209ENST00000560297 TMF1P82094 1093 aa17.17■□□□□ 0.34
USP8-209ENST00000560297 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
USP8-209ENST00000560297 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
USP8-209ENST00000560297 PUS7Q96PZ0 661 aaKnown RBP17.16■□□□□ 0.34
USP8-209ENST00000560297 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
USP8-209ENST00000560297 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
USP8-209ENST00000560297 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
USP8-209ENST00000560297 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
USP8-209ENST00000560297 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
USP8-209ENST00000560297 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
USP8-209ENST00000560297 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
USP8-209ENST00000560297 CABP2Q9NPB3 220 aa17.11■□□□□ 0.33
USP8-209ENST00000560297 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
USP8-209ENST00000560297 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
USP8-209ENST00000560297 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
USP8-209ENST00000560297 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
USP8-209ENST00000560297 MST1RQ04912 1400 aa17.1■□□□□ 0.33
USP8-209ENST00000560297 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
USP8-209ENST00000560297 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
USP8-209ENST00000560297 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
USP8-209ENST00000560297 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
USP8-209ENST00000560297 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
USP8-209ENST00000560297 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
USP8-209ENST00000560297 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
USP8-209ENST00000560297 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
USP8-209ENST00000560297 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
USP8-209ENST00000560297 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
USP8-209ENST00000560297 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
USP8-209ENST00000560297 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
USP8-209ENST00000560297 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
USP8-209ENST00000560297 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
USP8-209ENST00000560297 C11orf95C9JLR9 678 aaPredicted RBP17.03■□□□□ 0.32
USP8-209ENST00000560297 FMN2Q9NZ56 1722 aa17.03■□□□□ 0.32
USP8-209ENST00000560297 ATP7BP35670 1465 aa17.02■□□□□ 0.32
USP8-209ENST00000560297 FOXO3O43524 673 aa17.02■□□□□ 0.32
USP8-209ENST00000560297 NGDNQ8NEJ9 315 aaKnown RBP17.02■□□□□ 0.32
USP8-209ENST00000560297 PMFBP1Q8TBY8 1022 aa17.02■□□□□ 0.32
USP8-209ENST00000560297 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
USP8-209ENST00000560297 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
USP8-209ENST00000560297 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
USP8-209ENST00000560297 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
USP8-209ENST00000560297 PSME1Q06323 249 aa17■□□□□ 0.31
USP8-209ENST00000560297 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
USP8-209ENST00000560297 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
USP8-209ENST00000560297 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
USP8-209ENST00000560297 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
USP8-209ENST00000560297 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
USP8-209ENST00000560297 ACEP12821 1306 aa16.98■□□□□ 0.31
USP8-209ENST00000560297 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
USP8-209ENST00000560297 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
USP8-209ENST00000560297 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
USP8-209ENST00000560297 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
USP8-209ENST00000560297 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
USP8-209ENST00000560297 CCDC7Q96M83 1385 aa16.96■□□□□ 0.31
USP8-209ENST00000560297 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
USP8-209ENST00000560297 SOS2Q07890 1332 aaPredicted RBP16.95■□□□□ 0.3
USP8-209ENST00000560297 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
USP8-209ENST00000560297 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
USP8-209ENST00000560297 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
USP8-209ENST00000560297 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
USP8-209ENST00000560297 CPSF1Q10570 1443 aaKnown RBP16.93■□□□□ 0.3
USP8-209ENST00000560297 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
USP8-209ENST00000560297 KIF1AQ12756 1690 aa16.92■□□□□ 0.3
USP8-209ENST00000560297 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
USP8-209ENST00000560297 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
USP8-209ENST00000560297 XPCQ01831 940 aaPredicted RBP16.91■□□□□ 0.3
USP8-209ENST00000560297 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
USP8-209ENST00000560297 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
USP8-209ENST00000560297 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
USP8-209ENST00000560297 HSPA1LP34931 641 aa16.9■□□□□ 0.3
USP8-209ENST00000560297 PANK3Q9H999 370 aa16.9■□□□□ 0.3
USP8-209ENST00000560297 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
USP8-209ENST00000560297 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
USP8-209ENST00000560297 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
USP8-209ENST00000560297 USP6P35125 1406 aa16.88■□□□□ 0.29
USP8-209ENST00000560297 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
USP8-209ENST00000560297 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms