RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
AP3S2-206ENST00000558806 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
AP3S2-206ENST00000558806 TECPR2O15040 1411 aa15.98■□□□□ 0.15
AP3S2-206ENST00000558806 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
AP3S2-206ENST00000558806 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
AP3S2-206ENST00000558806 RGS12O14924 1447 aa15.97■□□□□ 0.15
AP3S2-206ENST00000558806 RGL3Q3MIN7 710 aa15.97■□□□□ 0.15
AP3S2-206ENST00000558806 ESCO1Q5FWF5 840 aa15.97■□□□□ 0.15
AP3S2-206ENST00000558806 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
AP3S2-206ENST00000558806 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
AP3S2-206ENST00000558806 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
AP3S2-206ENST00000558806 IFT172Q9UG01 1749 aa15.96■□□□□ 0.15
AP3S2-206ENST00000558806 USP21Q9UK80 565 aa15.95■□□□□ 0.14
AP3S2-206ENST00000558806 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
AP3S2-206ENST00000558806 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
AP3S2-206ENST00000558806 FNBP4Q8N3X1 1017 aaPredicted RBP15.94■□□□□ 0.14
AP3S2-206ENST00000558806 STK26Q9P289 416 aa15.94■□□□□ 0.14
AP3S2-206ENST00000558806 PXDNQ92626 1479 aa15.94■□□□□ 0.14
AP3S2-206ENST00000558806 WAPLQ7Z5K2 1190 aa15.93■□□□□ 0.14
AP3S2-206ENST00000558806 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
AP3S2-206ENST00000558806 KNDC1Q76NI1 1749 aa15.93■□□□□ 0.14
AP3S2-206ENST00000558806 MYOM2P54296 1465 aa15.92■□□□□ 0.14
AP3S2-206ENST00000558806 FOXO3O43524 673 aa15.92■□□□□ 0.14
AP3S2-206ENST00000558806 TMEM132EQ6IEE7 984 aa15.91■□□□□ 0.14
AP3S2-206ENST00000558806 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
AP3S2-206ENST00000558806 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
AP3S2-206ENST00000558806 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
AP3S2-206ENST00000558806 ATAD2Q6PL18 1390 aa15.88■□□□□ 0.13
AP3S2-206ENST00000558806 ATRNO75882 1429 aa15.88■□□□□ 0.13
AP3S2-206ENST00000558806 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
AP3S2-206ENST00000558806 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
AP3S2-206ENST00000558806 KIF1AQ12756 1690 aa15.88■□□□□ 0.13
AP3S2-206ENST00000558806 FMN2Q9NZ56 1722 aa15.88■□□□□ 0.13
AP3S2-206ENST00000558806 C14orf93Q9H972 538 aaKnown RBP15.87■□□□□ 0.13
AP3S2-206ENST00000558806 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
AP3S2-206ENST00000558806 NRXN1Q9ULB1 1477 aa15.86■□□□□ 0.13
AP3S2-206ENST00000558806 MARF1Q9Y4F3 1742 aaKnown RBP15.86■□□□□ 0.13
AP3S2-206ENST00000558806 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
AP3S2-206ENST00000558806 SPATA31A3Q5VYP0 1347 aa15.85■□□□□ 0.13
AP3S2-206ENST00000558806 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
AP3S2-206ENST00000558806 KRT28Q7Z3Y7 464 aa15.82■□□□□ 0.12
AP3S2-206ENST00000558806 GJD4Q96KN9 370 aaPredicted RBP15.82■□□□□ 0.12
AP3S2-206ENST00000558806 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.82■□□□□ 0.12
AP3S2-206ENST00000558806 PSME1Q06323 249 aa15.81■□□□□ 0.12
AP3S2-206ENST00000558806 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
AP3S2-206ENST00000558806 SLIT2O94813 1529 aa15.8■□□□□ 0.12
AP3S2-206ENST00000558806 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
AP3S2-206ENST00000558806 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
AP3S2-206ENST00000558806 PRAM1Q96QH2 718 aa15.8■□□□□ 0.12
AP3S2-206ENST00000558806 USP32Q8NFA0 1604 aa15.79■□□□□ 0.12
AP3S2-206ENST00000558806 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
AP3S2-206ENST00000558806 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
AP3S2-206ENST00000558806 SBNO1A3KN83 1393 aa15.78■□□□□ 0.12
AP3S2-206ENST00000558806 HAP1P54257 671 aaPredicted RBP15.78■□□□□ 0.12
AP3S2-206ENST00000558806 CCDC125Q86Z20 511 aa15.78■□□□□ 0.12
AP3S2-206ENST00000558806 POGKQ9P215 609 aa15.78■□□□□ 0.12
AP3S2-206ENST00000558806 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.12
AP3S2-206ENST00000558806 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
AP3S2-206ENST00000558806 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
AP3S2-206ENST00000558806 ANKARQ7Z5J8 1434 aa15.77■□□□□ 0.11
AP3S2-206ENST00000558806 ARHGEF10O15013 1369 aa15.76■□□□□ 0.11
AP3S2-206ENST00000558806 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
AP3S2-206ENST00000558806 EP400Q96L91 3159 aa15.75■□□□□ 0.11
AP3S2-206ENST00000558806 ADGRB1O14514 1584 aa15.75■□□□□ 0.11
AP3S2-206ENST00000558806 GLI3P10071 1580 aa15.75■□□□□ 0.11
AP3S2-206ENST00000558806 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
AP3S2-206ENST00000558806 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
AP3S2-206ENST00000558806 CABLES1Q8TDN4 633 aa15.73■□□□□ 0.11
AP3S2-206ENST00000558806 STAC3Q96MF2 364 aa15.73■□□□□ 0.11
AP3S2-206ENST00000558806 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
AP3S2-206ENST00000558806 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
AP3S2-206ENST00000558806 NWD2Q9ULI1 1742 aa15.72■□□□□ 0.11
AP3S2-206ENST00000558806 VPS72Q15906 364 aa15.72■□□□□ 0.11
AP3S2-206ENST00000558806 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
AP3S2-206ENST00000558806 ABCA3Q99758 1704 aa15.71■□□□□ 0.11
AP3S2-206ENST00000558806 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
AP3S2-206ENST00000558806 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
AP3S2-206ENST00000558806 BLMP54132 1417 aaPredicted RBP15.7■□□□□ 0.1
AP3S2-206ENST00000558806 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
AP3S2-206ENST00000558806 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
AP3S2-206ENST00000558806 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
AP3S2-206ENST00000558806 GPRASP1Q5JY77 1395 aa15.7■□□□□ 0.1
AP3S2-206ENST00000558806 TULP4Q9NRJ4 1543 aa15.69■□□□□ 0.1
AP3S2-206ENST00000558806 SEPT12Q8IYM1 358 aa15.69■□□□□ 0.1
AP3S2-206ENST00000558806 CCDC9Q9Y3X0 531 aaKnown RBP15.69■□□□□ 0.1
AP3S2-206ENST00000558806 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
AP3S2-206ENST00000558806 WASLO00401 505 aaPredicted RBP15.68■□□□□ 0.1
AP3S2-206ENST00000558806 HRCP23327 699 aa15.68■□□□□ 0.1
AP3S2-206ENST00000558806 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
AP3S2-206ENST00000558806 FAM83GA6ND36 823 aa15.67■□□□□ 0.1
AP3S2-206ENST00000558806 ONECUT3O60422 494 aaPredicted RBP15.67■□□□□ 0.1
AP3S2-206ENST00000558806 PRR36Q9H6K5 1346 aa15.67■□□□□ 0.1
AP3S2-206ENST00000558806 SF3B2Q13435 895 aaKnown RBP15.66■□□□□ 0.1
AP3S2-206ENST00000558806 ALS2Q96Q42 1657 aa15.66■□□□□ 0.1
AP3S2-206ENST00000558806 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
AP3S2-206ENST00000558806 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
AP3S2-206ENST00000558806 KRT27Q7Z3Y8 459 aa15.65■□□□□ 0.1
AP3S2-206ENST00000558806 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
AP3S2-206ENST00000558806 BTG4Q9NY30 223 aa15.64■□□□□ 0.09
AP3S2-206ENST00000558806 COL14A1Q05707 1796 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms