RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 TRIM52Q96A61 297 aa5.95□□□□□ -1.46
ZEB1-212ENST00000558655 ZNF219Q9P2Y4 722 aaPredicted RBP5.95□□□□□ -1.46
ZEB1-212ENST00000558655 KANK1Q14678 1352 aa5.95□□□□□ -1.46
ZEB1-212ENST00000558655 DHX57Q6P158 1386 aaKnown RBP5.95□□□□□ -1.46
ZEB1-212ENST00000558655 IFT172Q9UG01 1749 aa5.95□□□□□ -1.46
ZEB1-212ENST00000558655 ITGAEP38570 1179 aa5.95□□□□□ -1.46
ZEB1-212ENST00000558655 KIF1BO60333 1816 aa5.94□□□□□ -1.46
ZEB1-212ENST00000558655 NOS1P29475 1434 aa5.94□□□□□ -1.46
ZEB1-212ENST00000558655 NLRP1Q9C000 1473 aa5.94□□□□□ -1.46
ZEB1-212ENST00000558655 NUP155O75694 1391 aa5.93□□□□□ -1.46
ZEB1-212ENST00000558655 CLTCL1P53675 1640 aa5.93□□□□□ -1.46
ZEB1-212ENST00000558655 NKTRP30414 1462 aaKnown RBP5.93□□□□□ -1.46
ZEB1-212ENST00000558655 JMYQ8N9B5 988 aa5.93□□□□□ -1.46
ZEB1-212ENST00000558655 ERVK-7P63135 1459 aa5.93□□□□□ -1.46
ZEB1-212ENST00000558655 KIF3BO15066 747 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 APLP1P51693 650 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 NEXMIFQ5QGS0 1516 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 IGSF3O75054 1194 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 RGS19P49795 217 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 CCER1Q8TC90 406 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-212ENST00000558655 ANKRD30BQ9BXX2 1392 aa5.92□□□□□ -1.46
ZEB1-212ENST00000558655 ADGRB2O60241 1585 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 MEX3CQ5U5Q3 659 aaKnown RBP5.91□□□□□ -1.46
ZEB1-212ENST00000558655 MPHOSPH9Q99550 1183 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 ADGRB3O60242 1522 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 MYO5BQ9ULV0 1848 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 UBR1Q8IWV7 1749 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 TMEM131LA2VDJ0 1609 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 PPLO60437 1756 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 PTCH1Q13635 1447 aa5.91□□□□□ -1.46
ZEB1-212ENST00000558655 ESF1Q9H501 851 aaKnown RBP5.9□□□□□ -1.46
ZEB1-212ENST00000558655 CFAP65Q6ZU64 1925 aaKnown RBP5.9□□□□□ -1.46
ZEB1-212ENST00000558655 ATRNO75882 1429 aa5.9□□□□□ -1.46
ZEB1-212ENST00000558655 TNS2Q63HR2 1409 aa5.9□□□□□ -1.47
ZEB1-212ENST00000558655 UBE2Q2Q8WVN8 375 aa5.89□□□□□ -1.47
ZEB1-212ENST00000558655 MYT1LQ9UL68 1186 aa5.89□□□□□ -1.47
ZEB1-212ENST00000558655 MAP3K5Q99683 1374 aa5.89□□□□□ -1.47
ZEB1-212ENST00000558655 NUTM2BA6NNL0 878 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 NUTM2EB1AL46 878 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 SF3B2Q13435 895 aaKnown RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 NUTM2DQ5VT03 806 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 NUTM2AQ8IVF1 878 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 MKRN4PQ13434 485 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-212ENST00000558655 ZMYM3Q14202 1370 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 SPATA31E1Q6ZUB1 1445 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 ANKLE2Q86XL3 938 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 DLC1Q96QB1 1528 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 WASHC2CQ9Y4E1 1318 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 SHANK3Q9BYB0 1731 aa5.88□□□□□ -1.47
ZEB1-212ENST00000558655 UGGT1Q9NYU2 1555 aa5.87□□□□□ -1.47
ZEB1-212ENST00000558655 LAMC1P11047 1609 aa5.87□□□□□ -1.47
ZEB1-212ENST00000558655 RREB1Q92766 1687 aa5.87□□□□□ -1.47
ZEB1-212ENST00000558655 MYOM2P54296 1465 aa5.87□□□□□ -1.47
ZEB1-212ENST00000558655 CDK11BP21127 795 aaKnown RBP5.86□□□□□ -1.47
ZEB1-212ENST00000558655 GGT6Q6P531 493 aa5.86□□□□□ -1.47
ZEB1-212ENST00000558655 NRXN1Q9ULB1 1477 aa5.86□□□□□ -1.47
ZEB1-212ENST00000558655 SLIT1O75093 1534 aa5.86□□□□□ -1.47
ZEB1-212ENST00000558655 ZFYVE9O95405 1425 aa5.86□□□□□ -1.47
ZEB1-212ENST00000558655 RGPD3A6NKT7 1758 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-212ENST00000558655 RGPD4Q7Z3J3 1758 aa5.85□□□□□ -1.47
ZEB1-212ENST00000558655 CCDC144AA2RUR9 1427 aa5.85□□□□□ -1.47
ZEB1-212ENST00000558655 TNRQ92752 1358 aa5.85□□□□□ -1.47
ZEB1-212ENST00000558655 AFF2P51816 1311 aa5.85□□□□□ -1.47
ZEB1-212ENST00000558655 SLC52A1Q9NWF4 448 aa5.85□□□□□ -1.47
ZEB1-212ENST00000558655 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-212ENST00000558655 WDR90Q96KV7 1748 aa5.84□□□□□ -1.47
ZEB1-212ENST00000558655 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-212ENST00000558655 BAG6P46379 1132 aa5.84□□□□□ -1.47
ZEB1-212ENST00000558655 CEBPAP49715 358 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-212ENST00000558655 TRPM1Q7Z4N2 1603 aa5.84□□□□□ -1.47
ZEB1-212ENST00000558655 FAM83GA6ND36 823 aa5.84□□□□□ -1.47
ZEB1-212ENST00000558655 STAC3Q96MF2 364 aa5.84□□□□□ -1.47
ZEB1-212ENST00000558655 COL22A1Q8NFW1 1626 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-212ENST00000558655 NRXN3Q9Y4C0 1643 aa5.83□□□□□ -1.48
ZEB1-212ENST00000558655 RPGRIP1LQ68CZ1 1315 aa5.83□□□□□ -1.48
ZEB1-212ENST00000558655 GCC1Q96CN9 775 aa5.83□□□□□ -1.48
ZEB1-212ENST00000558655 THEMISQ8N1K5 641 aaPredicted RBP5.83□□□□□ -1.48
ZEB1-212ENST00000558655 QTRT2Q9H974 415 aaKnown RBP5.83□□□□□ -1.48
ZEB1-212ENST00000558655 WWC3Q9ULE0 1092 aa5.83□□□□□ -1.48
ZEB1-212ENST00000558655 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
ZEB1-212ENST00000558655 MARF1Q9Y4F3 1742 aaKnown RBP5.82□□□□□ -1.48
ZEB1-212ENST00000558655 PDE4CQ08493 712 aa5.82□□□□□ -1.48
ZEB1-212ENST00000558655 PRAG1Q86YV5 1406 aa5.81□□□□□ -1.48
ZEB1-212ENST00000558655 MLECQ14165 292 aa5.81□□□□□ -1.48
ZEB1-212ENST00000558655 NBR1Q14596 966 aa5.81□□□□□ -1.48
ZEB1-212ENST00000558655 PAXIP1Q6ZW49 1069 aaPredicted RBP5.81□□□□□ -1.48
ZEB1-212ENST00000558655 TSHZ2Q9NRE2 1034 aa5.81□□□□□ -1.48
ZEB1-212ENST00000558655 FBXO31Q5XUX0 539 aaPredicted RBP5.8□□□□□ -1.48
ZEB1-212ENST00000558655 BRD2P25440 801 aaKnown RBP5.8□□□□□ -1.48
ZEB1-212ENST00000558655 IDI1Q13907 227 aa5.8□□□□□ -1.48
ZEB1-212ENST00000558655 CFAP44Q96MT7 982 aa5.8□□□□□ -1.48
ZEB1-212ENST00000558655 PIK3C2GO75747 1445 aa5.8□□□□□ -1.48
ZEB1-212ENST00000558655 TMEM2Q9UHN6 1383 aa5.79□□□□□ -1.48
ZEB1-212ENST00000558655 SPON1Q9HCB6 807 aa5.79□□□□□ -1.48
ZEB1-212ENST00000558655 CCDC9Q9Y3X0 531 aaKnown RBP5.79□□□□□ -1.48
ZEB1-212ENST00000558655 DCCP43146 1447 aa5.79□□□□□ -1.48
ZEB1-212ENST00000558655 RIMS2Q9UQ26 1411 aa5.79□□□□□ -1.48
ZEB1-212ENST00000558655 CHD2O14647 1828 aaKnown RBP5.79□□□□□ -1.48
ZEB1-212ENST00000558655 GPRASP1Q5JY77 1395 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms