RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 FNBP4Q8N3X1 1017 aaPredicted RBP24.66■■□□□ 1.54
NEK9-211ENST00000557673 FOXD1Q16676 465 aa24.65■■□□□ 1.54
NEK9-211ENST00000557673 PPLO60437 1756 aa24.65■■□□□ 1.54
NEK9-211ENST00000557673 ATAD2Q6PL18 1390 aa24.64■■□□□ 1.53
NEK9-211ENST00000557673 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
NEK9-211ENST00000557673 CCDC144AA2RUR9 1427 aa24.62■■□□□ 1.53
NEK9-211ENST00000557673 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
NEK9-211ENST00000557673 CDC42BPGQ6DT37 1551 aa24.61■■□□□ 1.53
NEK9-211ENST00000557673 MPHOSPH9Q99550 1183 aa24.6■■□□□ 1.53
NEK9-211ENST00000557673 ADGRF5Q8IZF2 1346 aa24.6■■□□□ 1.53
NEK9-211ENST00000557673 FOXO3O43524 673 aa24.59■■□□□ 1.53
NEK9-211ENST00000557673 RGL3Q3MIN7 710 aa24.59■■□□□ 1.53
NEK9-211ENST00000557673 STK26Q9P289 416 aa24.59■■□□□ 1.53
NEK9-211ENST00000557673 COL22A1Q8NFW1 1626 aaPredicted RBP24.59■■□□□ 1.53
NEK9-211ENST00000557673 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
NEK9-211ENST00000557673 TECPR2O15040 1411 aa24.57■■□□□ 1.52
NEK9-211ENST00000557673 ATRNO75882 1429 aa24.57■■□□□ 1.52
NEK9-211ENST00000557673 MYOM2P54296 1465 aa24.57■■□□□ 1.52
NEK9-211ENST00000557673 ABCC11Q96J66 1382 aa24.56■■□□□ 1.52
NEK9-211ENST00000557673 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
NEK9-211ENST00000557673 PXDNQ92626 1479 aa24.55■■□□□ 1.52
NEK9-211ENST00000557673 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
NEK9-211ENST00000557673 SPATA31E1Q6ZUB1 1445 aa24.53■■□□□ 1.52
NEK9-211ENST00000557673 XPCQ01831 940 aaPredicted RBP24.53■■□□□ 1.52
NEK9-211ENST00000557673 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
NEK9-211ENST00000557673 NUTM2FA1L443 756 aa24.52■■□□□ 1.52
NEK9-211ENST00000557673 CCDC125Q86Z20 511 aa24.52■■□□□ 1.52
NEK9-211ENST00000557673 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
NEK9-211ENST00000557673 BCL9LQ86UU0 1499 aa24.51■■□□□ 1.51
NEK9-211ENST00000557673 SIRT1Q96EB6 747 aa24.49■■□□□ 1.51
NEK9-211ENST00000557673 GJD4Q96KN9 370 aaPredicted RBP24.49■■□□□ 1.51
NEK9-211ENST00000557673 PIK3C2GO75747 1445 aa24.48■■□□□ 1.51
NEK9-211ENST00000557673 ZRANB1Q9UGI0 708 aa24.47■■□□□ 1.51
NEK9-211ENST00000557673 YTHDC2Q9H6S0 1430 aaKnown RBP24.46■■□□□ 1.51
NEK9-211ENST00000557673 SPATA31A3Q5VYP0 1347 aa24.46■■□□□ 1.51
NEK9-211ENST00000557673 PLEKHH1Q9ULM0 1364 aa24.45■■□□□ 1.5
NEK9-211ENST00000557673 UNC5CLQ8IV45 518 aa24.45■■□□□ 1.5
NEK9-211ENST00000557673 PSME1Q06323 249 aa24.44■■□□□ 1.5
NEK9-211ENST00000557673 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
NEK9-211ENST00000557673 KNDC1Q76NI1 1749 aa24.44■■□□□ 1.5
NEK9-211ENST00000557673 MARF1Q9Y4F3 1742 aaKnown RBP24.44■■□□□ 1.5
NEK9-211ENST00000557673 C14orf93Q9H972 538 aaKnown RBP24.43■■□□□ 1.5
NEK9-211ENST00000557673 IFT172Q9UG01 1749 aa24.43■■□□□ 1.5
NEK9-211ENST00000557673 HAP1P54257 671 aaPredicted RBP24.42■■□□□ 1.5
NEK9-211ENST00000557673 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
NEK9-211ENST00000557673 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
NEK9-211ENST00000557673 HRCP23327 699 aa24.4■■□□□ 1.5
NEK9-211ENST00000557673 PHF8Q9UPP1 1060 aa24.4■■□□□ 1.5
NEK9-211ENST00000557673 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
NEK9-211ENST00000557673 SLIT2O94813 1529 aa24.39■■□□□ 1.49
NEK9-211ENST00000557673 SRCAPQ6ZRS2 3230 aa24.37■■□□□ 1.49
NEK9-211ENST00000557673 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
NEK9-211ENST00000557673 EP400Q96L91 3159 aa24.36■■□□□ 1.49
NEK9-211ENST00000557673 RALGAPBQ86X10 1494 aa24.36■■□□□ 1.49
NEK9-211ENST00000557673 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
NEK9-211ENST00000557673 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
NEK9-211ENST00000557673 NRXN1Q9ULB1 1477 aa24.34■■□□□ 1.49
NEK9-211ENST00000557673 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
NEK9-211ENST00000557673 PRAM1Q96QH2 718 aa24.34■■□□□ 1.49
NEK9-211ENST00000557673 ARHGEF10O15013 1369 aa24.33■■□□□ 1.49
NEK9-211ENST00000557673 POGKQ9P215 609 aa24.33■■□□□ 1.49
NEK9-211ENST00000557673 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
NEK9-211ENST00000557673 VPS72Q15906 364 aa24.32■■□□□ 1.48
NEK9-211ENST00000557673 LMOD2Q6P5Q4 547 aa24.32■■□□□ 1.48
NEK9-211ENST00000557673 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
NEK9-211ENST00000557673 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
NEK9-211ENST00000557673 SAFB2Q14151 953 aaKnown RBP eCLIP24.31■■□□□ 1.48
NEK9-211ENST00000557673 SEPT12Q8IYM1 358 aa24.3■■□□□ 1.48
NEK9-211ENST00000557673 GLI3P10071 1580 aa24.29■■□□□ 1.48
NEK9-211ENST00000557673 CABLES1Q8TDN4 633 aa24.29■■□□□ 1.48
NEK9-211ENST00000557673 CCDC9Q9Y3X0 531 aaKnown RBP24.29■■□□□ 1.48
NEK9-211ENST00000557673 ANKARQ7Z5J8 1434 aa24.28■■□□□ 1.48
NEK9-211ENST00000557673 ONECUT3O60422 494 aaPredicted RBP24.27■■□□□ 1.48
NEK9-211ENST00000557673 DLC1Q96QB1 1528 aa24.26■■□□□ 1.47
NEK9-211ENST00000557673 PLEKHG5O94827 1062 aa24.26■■□□□ 1.47
NEK9-211ENST00000557673 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
NEK9-211ENST00000557673 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
NEK9-211ENST00000557673 EIF3AQ14152 1382 aaKnown RBP24.24■■□□□ 1.47
NEK9-211ENST00000557673 KRT27Q7Z3Y8 459 aa24.23■■□□□ 1.47
NEK9-211ENST00000557673 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
NEK9-211ENST00000557673 NWD2Q9ULI1 1742 aa24.23■■□□□ 1.47
NEK9-211ENST00000557673 FAM83GA6ND36 823 aa24.22■■□□□ 1.47
NEK9-211ENST00000557673 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
NEK9-211ENST00000557673 PCGF6Q9BYE7 350 aa24.21■■□□□ 1.47
NEK9-211ENST00000557673 TRAK1Q9UPV9 953 aa24.21■■□□□ 1.47
NEK9-211ENST00000557673 A0A0G2JS52 829 aa24.19■■□□□ 1.46
NEK9-211ENST00000557673 MYT1Q01538 1121 aa24.19■■□□□ 1.46
NEK9-211ENST00000557673 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
NEK9-211ENST00000557673 ADGRB2O60241 1585 aa24.19■■□□□ 1.46
NEK9-211ENST00000557673 PLCH1Q4KWH8 1693 aa24.18■■□□□ 1.46
NEK9-211ENST00000557673 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
NEK9-211ENST00000557673 BRWD3Q6RI45 1802 aa24.17■■□□□ 1.46
NEK9-211ENST00000557673 MINK1Q8N4C8 1332 aaPredicted RBP24.16■■□□□ 1.46
NEK9-211ENST00000557673 BTG4Q9NY30 223 aa24.16■■□□□ 1.46
NEK9-211ENST00000557673 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
NEK9-211ENST00000557673 WASLO00401 505 aaPredicted RBP24.15■■□□□ 1.46
NEK9-211ENST00000557673 KDM2AQ9Y2K7 1162 aa24.15■■□□□ 1.46
NEK9-211ENST00000557673 NGDNQ8NEJ9 315 aaKnown RBP24.14■■□□□ 1.45
NEK9-211ENST00000557673 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
NEK9-211ENST00000557673 ABCA3Q99758 1704 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms