RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.76■□□□□ 0.11
ABCD4-227ENST00000557554 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
ABCD4-227ENST00000557554 SLIT2O94813 1529 aa15.74■□□□□ 0.11
ABCD4-227ENST00000557554 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
ABCD4-227ENST00000557554 SEPT12Q8IYM1 358 aa15.73■□□□□ 0.11
ABCD4-227ENST00000557554 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
ABCD4-227ENST00000557554 PXDNQ92626 1479 aa15.71■□□□□ 0.11
ABCD4-227ENST00000557554 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
ABCD4-227ENST00000557554 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
ABCD4-227ENST00000557554 FOXO3O43524 673 aa15.68■□□□□ 0.1
ABCD4-227ENST00000557554 YY1P25490 414 aa15.68■□□□□ 0.1
ABCD4-227ENST00000557554 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
ABCD4-227ENST00000557554 VPS72Q15906 364 aa15.67■□□□□ 0.1
ABCD4-227ENST00000557554 BAG6P46379 1132 aa15.66■□□□□ 0.1
ABCD4-227ENST00000557554 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
ABCD4-227ENST00000557554 ESCO1Q5FWF5 840 aa15.66■□□□□ 0.1
ABCD4-227ENST00000557554 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
ABCD4-227ENST00000557554 PRAG1Q86YV5 1406 aa15.65■□□□□ 0.1
ABCD4-227ENST00000557554 EN1Q05925 392 aaPredicted RBP15.64■□□□□ 0.09
ABCD4-227ENST00000557554 R3HDM1Q15032 1099 aaKnown RBP15.64■□□□□ 0.09
ABCD4-227ENST00000557554 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
ABCD4-227ENST00000557554 SPATA31A3Q5VYP0 1347 aa15.62■□□□□ 0.09
ABCD4-227ENST00000557554 NUP155O75694 1391 aa15.61■□□□□ 0.09
ABCD4-227ENST00000557554 HFM1A2PYH4 1435 aa15.6■□□□□ 0.09
ABCD4-227ENST00000557554 LRPPRCP42704 1394 aaKnown RBP15.59■□□□□ 0.09
ABCD4-227ENST00000557554 USP32Q8NFA0 1604 aa15.58■□□□□ 0.09
ABCD4-227ENST00000557554 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
ABCD4-227ENST00000557554 DISP2A7MBM2 1401 aa15.58■□□□□ 0.08
ABCD4-227ENST00000557554 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
ABCD4-227ENST00000557554 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
ABCD4-227ENST00000557554 LOC105371045A0A1W2PR82 267 aa15.56■□□□□ 0.08
ABCD4-227ENST00000557554 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
ABCD4-227ENST00000557554 CAMKK2Q96RR4 588 aa15.56■□□□□ 0.08
ABCD4-227ENST00000557554 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
ABCD4-227ENST00000557554 EZH2Q15910 746 aaKnown RBP15.55■□□□□ 0.08
ABCD4-227ENST00000557554 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
ABCD4-227ENST00000557554 ROCK1Q13464 1354 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 APLP2Q06481 763 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 FAM182BQ5T319 152 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 IFFO2Q5TF58 517 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 KRT28Q7Z3Y7 464 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
ABCD4-227ENST00000557554 RGPD1P0DJD0 1748 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
ABCD4-227ENST00000557554 NUTM2FA1L443 756 aa15.53■□□□□ 0.08
ABCD4-227ENST00000557554 FAM98CQ17RN3 349 aaKnown RBP15.53■□□□□ 0.08
ABCD4-227ENST00000557554 CLTCL1P53675 1640 aa15.52■□□□□ 0.08
ABCD4-227ENST00000557554 TNS1Q9HBL0 1735 aaKnown RBP15.51■□□□□ 0.07
ABCD4-227ENST00000557554 NAIPQ13075 1403 aa15.51■□□□□ 0.07
ABCD4-227ENST00000557554 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
ABCD4-227ENST00000557554 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
ABCD4-227ENST00000557554 KIF1BO60333 1816 aa15.47■□□□□ 0.07
ABCD4-227ENST00000557554 A0A0G2JS52 829 aa15.47■□□□□ 0.07
ABCD4-227ENST00000557554 HAP1P54257 671 aaPredicted RBP15.47■□□□□ 0.07
ABCD4-227ENST00000557554 MYT1Q01538 1121 aa15.47■□□□□ 0.07
ABCD4-227ENST00000557554 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
ABCD4-227ENST00000557554 NRAPQ86VF7 1730 aa15.46■□□□□ 0.07
ABCD4-227ENST00000557554 TNS3Q68CZ2 1445 aa15.46■□□□□ 0.07
ABCD4-227ENST00000557554 ABCA3Q99758 1704 aa15.46■□□□□ 0.06
ABCD4-227ENST00000557554 SPATA31A5Q5VU36 1347 aa15.45■□□□□ 0.06
ABCD4-227ENST00000557554 SPATA31A7Q8IWB4 1347 aa15.45■□□□□ 0.06
ABCD4-227ENST00000557554 PSME1Q06323 249 aa15.45■□□□□ 0.06
ABCD4-227ENST00000557554 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
ABCD4-227ENST00000557554 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
ABCD4-227ENST00000557554 SBNO1A3KN83 1393 aa15.45■□□□□ 0.06
ABCD4-227ENST00000557554 KIF1AQ12756 1690 aa15.44■□□□□ 0.06
ABCD4-227ENST00000557554 TECPR2O15040 1411 aa15.44■□□□□ 0.06
ABCD4-227ENST00000557554 FMN2Q9NZ56 1722 aa15.44■□□□□ 0.06
ABCD4-227ENST00000557554 TRIM37O94972 964 aa15.44■□□□□ 0.06
ABCD4-227ENST00000557554 PARD3Q8TEW0 1356 aa15.44■□□□□ 0.06
ABCD4-227ENST00000557554 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
ABCD4-227ENST00000557554 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
ABCD4-227ENST00000557554 THSD7AQ9UPZ6 1657 aa15.43■□□□□ 0.06
ABCD4-227ENST00000557554 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
ABCD4-227ENST00000557554 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 NINLQ9Y2I6 1382 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 KCNQ2O43526 872 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 APBA3O96018 575 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 FAM196AQ6ZSG2 479 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 SPON1Q9HCB6 807 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
ABCD4-227ENST00000557554 UTRNP46939 3433 aa15.41■□□□□ 0.06
ABCD4-227ENST00000557554 PPLO60437 1756 aa15.41■□□□□ 0.06
ABCD4-227ENST00000557554 RREB1Q92766 1687 aa15.41■□□□□ 0.06
ABCD4-227ENST00000557554 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
ABCD4-227ENST00000557554 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
ABCD4-227ENST00000557554 STK26Q9P289 416 aa15.4■□□□□ 0.06
ABCD4-227ENST00000557554 CAMTA1Q9Y6Y1 1673 aa15.4■□□□□ 0.06
ABCD4-227ENST00000557554 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
ABCD4-227ENST00000557554 NUP188Q5SRE5 1749 aa15.39■□□□□ 0.05
ABCD4-227ENST00000557554 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 NBPF8Q3BBV2 869 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
ABCD4-227ENST00000557554 NRXN1Q9ULB1 1477 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
ABCD4-227ENST00000557554 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
ABCD4-227ENST00000557554 COL14A1Q05707 1796 aaKnown RBP15.37■□□□□ 0.05
ABCD4-227ENST00000557554 TMEM132EQ6IEE7 984 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms