RNA–Protein interactions for RNA: ENST00000557434.5

LGMN-216, Transcript of legumain, humanhuman

TSL 5 BASIC

Gene LGMN, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-216ENST00000557434 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
LGMN-216ENST00000557434 KCNA6P17658 529 aa24.19■■□□□ 1.46
LGMN-216ENST00000557434 POGKQ9P215 609 aa24.19■■□□□ 1.46
LGMN-216ENST00000557434 MYOM1P52179 1685 aa24.17■■□□□ 1.46
LGMN-216ENST00000557434 MINK1Q8N4C8 1332 aaPredicted RBP24.16■■□□□ 1.46
LGMN-216ENST00000557434 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
LGMN-216ENST00000557434 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.46
LGMN-216ENST00000557434 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
LGMN-216ENST00000557434 SLC24A1O60721 1099 aa24.1■■□□□ 1.45
LGMN-216ENST00000557434 EVC2Q86UK5 1308 aa24.09■■□□□ 1.45
LGMN-216ENST00000557434 NALCNQ8IZF0 1738 aa24.08■■□□□ 1.45
LGMN-216ENST00000557434 CABP2Q9NPB3 220 aa24.07■■□□□ 1.44
LGMN-216ENST00000557434 RBM33Q96EV2 1170 aaKnown RBP24.06■■□□□ 1.44
LGMN-216ENST00000557434 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
LGMN-216ENST00000557434 CDK19Q9BWU1 502 aa24.06■■□□□ 1.44
LGMN-216ENST00000557434 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
LGMN-216ENST00000557434 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
LGMN-216ENST00000557434 PUS7Q96PZ0 661 aaKnown RBP24.03■■□□□ 1.44
LGMN-216ENST00000557434 USP32Q8NFA0 1604 aa24.01■■□□□ 1.43
LGMN-216ENST00000557434 XIRP1Q702N8 1843 aaKnown RBP24.01■■□□□ 1.43
LGMN-216ENST00000557434 SRPK2P78362 688 aaKnown RBP24■■□□□ 1.43
LGMN-216ENST00000557434 ZNF335Q9H4Z2 1342 aaPredicted RBP24■■□□□ 1.43
LGMN-216ENST00000557434 ATP7BP35670 1465 aa23.99■■□□□ 1.43
LGMN-216ENST00000557434 PRR36Q9H6K5 1346 aa23.99■■□□□ 1.43
LGMN-216ENST00000557434 SLC12A5Q9H2X9 1139 aa23.98■■□□□ 1.43
LGMN-216ENST00000557434 ADGRL3Q9HAR2 1447 aa23.98■■□□□ 1.43
LGMN-216ENST00000557434 PANK3Q9H999 370 aa23.98■■□□□ 1.43
LGMN-216ENST00000557434 RGPD8O14715 1765 aaPredicted RBP23.97■■□□□ 1.43
LGMN-216ENST00000557434 FMN2Q9NZ56 1722 aa23.97■■□□□ 1.43
LGMN-216ENST00000557434 PER1O15534 1290 aaPredicted RBP23.97■■□□□ 1.43
LGMN-216ENST00000557434 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
LGMN-216ENST00000557434 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
LGMN-216ENST00000557434 TOPAZ1Q8N9V7 1692 aa23.97■■□□□ 1.43
LGMN-216ENST00000557434 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.43
LGMN-216ENST00000557434 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
LGMN-216ENST00000557434 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
LGMN-216ENST00000557434 TMEM94Q12767 1356 aa23.94■■□□□ 1.42
LGMN-216ENST00000557434 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
LGMN-216ENST00000557434 LRRC7Q96NW7 1537 aa23.93■■□□□ 1.42
LGMN-216ENST00000557434 MIER1Q8N108 512 aa23.92■■□□□ 1.42
LGMN-216ENST00000557434 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
LGMN-216ENST00000557434 CARD14Q9BXL6 1004 aa23.92■■□□□ 1.42
LGMN-216ENST00000557434 NUTM2FA1L443 756 aa23.91■■□□□ 1.42
LGMN-216ENST00000557434 CABP1Q9NZU7 370 aa23.9■■□□□ 1.42
LGMN-216ENST00000557434 NINLQ9Y2I6 1382 aa23.89■■□□□ 1.42
LGMN-216ENST00000557434 PPIP5K1Q6PFW1 1433 aa23.89■■□□□ 1.41
LGMN-216ENST00000557434 NCOA3Q9Y6Q9 1424 aa23.88■■□□□ 1.41
LGMN-216ENST00000557434 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
LGMN-216ENST00000557434 ANKRD36BQ8N2N9 1353 aa23.88■■□□□ 1.41
LGMN-216ENST00000557434 AEBP2Q6ZN18 517 aaPredicted RBP23.88■■□□□ 1.41
LGMN-216ENST00000557434 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
LGMN-216ENST00000557434 ITSN1Q15811 1721 aa23.87■■□□□ 1.41
LGMN-216ENST00000557434 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
LGMN-216ENST00000557434 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
LGMN-216ENST00000557434 LTBP4Q8N2S1 1624 aa23.85■■□□□ 1.41
LGMN-216ENST00000557434 CPSF1Q10570 1443 aaKnown RBP23.84■■□□□ 1.41
LGMN-216ENST00000557434 C14orf37Q86TY3 774 aa23.83■■□□□ 1.41
LGMN-216ENST00000557434 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
LGMN-216ENST00000557434 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.4
LGMN-216ENST00000557434 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
LGMN-216ENST00000557434 MON2Q7Z3U7 1717 aa23.82■■□□□ 1.4
LGMN-216ENST00000557434 DCCP43146 1447 aa23.81■■□□□ 1.4
LGMN-216ENST00000557434 PRKRIP1Q9H875 184 aaPredicted RBP23.8■■□□□ 1.4
LGMN-216ENST00000557434 PLEKHG3A1L390 1219 aa23.8■■□□□ 1.4
LGMN-216ENST00000557434 ANP32CO43423 234 aa23.78■■□□□ 1.4
LGMN-216ENST00000557434 MST1RQ04912 1400 aa23.78■■□□□ 1.4
LGMN-216ENST00000557434 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
LGMN-216ENST00000557434 KNSTRNQ9Y448 316 aa23.78■■□□□ 1.4
LGMN-216ENST00000557434 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
LGMN-216ENST00000557434 TERF2IPQ9NYB0 399 aa23.77■■□□□ 1.4
LGMN-216ENST00000557434 ACEP12821 1306 aa23.76■■□□□ 1.39
LGMN-216ENST00000557434 C1orf167Q5SNV9 1468 aa23.76■■□□□ 1.39
LGMN-216ENST00000557434 POLR3AO14802 1390 aaPredicted RBP23.76■■□□□ 1.39
LGMN-216ENST00000557434 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
LGMN-216ENST00000557434 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
LGMN-216ENST00000557434 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
LGMN-216ENST00000557434 MSH6P52701 1360 aa23.75■■□□□ 1.39
LGMN-216ENST00000557434 PARD3Q8TEW0 1356 aa23.75■■□□□ 1.39
LGMN-216ENST00000557434 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
LGMN-216ENST00000557434 KTN1Q86UP2 1357 aaKnown RBP23.73■■□□□ 1.39
LGMN-216ENST00000557434 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
LGMN-216ENST00000557434 USP6P35125 1406 aa23.72■■□□□ 1.39
LGMN-216ENST00000557434 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
LGMN-216ENST00000557434 KIF20BQ96Q89 1820 aa23.71■■□□□ 1.39
LGMN-216ENST00000557434 ATF3P18847 181 aa23.71■■□□□ 1.39
LGMN-216ENST00000557434 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
LGMN-216ENST00000557434 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
LGMN-216ENST00000557434 PHF8Q9UPP1 1060 aa23.7■■□□□ 1.38
LGMN-216ENST00000557434 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
LGMN-216ENST00000557434 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
LGMN-216ENST00000557434 CGNL1Q0VF96 1302 aa23.68■■□□□ 1.38
LGMN-216ENST00000557434 FYB1O15117 783 aa23.68■■□□□ 1.38
LGMN-216ENST00000557434 ZNF692Q9BU19 519 aaPredicted RBP23.68■■□□□ 1.38
LGMN-216ENST00000557434 CCDC184Q52MB2 194 aa23.66■■□□□ 1.38
LGMN-216ENST00000557434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
LGMN-216ENST00000557434 KIF1AQ12756 1690 aa23.66■■□□□ 1.38
LGMN-216ENST00000557434 RALBP1Q15311 655 aa23.65■■□□□ 1.38
LGMN-216ENST00000557434 NGDNQ8NEJ9 315 aaKnown RBP23.65■■□□□ 1.38
LGMN-216ENST00000557434 GGNBP2Q9H3C7 697 aa23.63■■□□□ 1.37
LGMN-216ENST00000557434 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms