RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
CHD8-211ENST00000556833 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
CHD8-211ENST00000556833 CDC42BPGQ6DT37 1551 aa22.12■■□□□ 1.13
CHD8-211ENST00000556833 SOS2Q07890 1332 aaPredicted RBP22.12■■□□□ 1.13
CHD8-211ENST00000556833 ESCO1Q5FWF5 840 aa22.12■■□□□ 1.13
CHD8-211ENST00000556833 WAPLQ7Z5K2 1190 aa22.12■■□□□ 1.13
CHD8-211ENST00000556833 TMEM132EQ6IEE7 984 aa22.11■■□□□ 1.13
CHD8-211ENST00000556833 PRAG1Q86YV5 1406 aa22.11■■□□□ 1.13
CHD8-211ENST00000556833 RBM6P78332 1123 aaKnown RBP22.1■■□□□ 1.13
CHD8-211ENST00000556833 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
CHD8-211ENST00000556833 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
CHD8-211ENST00000556833 SPATA31E1Q6ZUB1 1445 aa22.08■■□□□ 1.13
CHD8-211ENST00000556833 COL22A1Q8NFW1 1626 aaPredicted RBP22.08■■□□□ 1.13
CHD8-211ENST00000556833 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
CHD8-211ENST00000556833 USP21Q9UK80 565 aa22.07■■□□□ 1.12
CHD8-211ENST00000556833 FOXO3O43524 673 aa22.06■■□□□ 1.12
CHD8-211ENST00000556833 PXDNQ92626 1479 aa22.06■■□□□ 1.12
CHD8-211ENST00000556833 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
CHD8-211ENST00000556833 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
CHD8-211ENST00000556833 FMN2Q9NZ56 1722 aa22.04■■□□□ 1.12
CHD8-211ENST00000556833 NPHP3Q7Z494 1330 aa22.04■■□□□ 1.12
CHD8-211ENST00000556833 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
CHD8-211ENST00000556833 PLEKHG5O94827 1062 aa22.03■■□□□ 1.12
CHD8-211ENST00000556833 MYOM2P54296 1465 aa22.03■■□□□ 1.12
CHD8-211ENST00000556833 ANKRD30BQ9BXX2 1392 aa22.02■■□□□ 1.12
CHD8-211ENST00000556833 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
CHD8-211ENST00000556833 TECPR2O15040 1411 aa22.01■■□□□ 1.11
CHD8-211ENST00000556833 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
CHD8-211ENST00000556833 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
CHD8-211ENST00000556833 ATRNO75882 1429 aa21.98■■□□□ 1.11
CHD8-211ENST00000556833 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
CHD8-211ENST00000556833 KIF1AQ12756 1690 aa21.97■■□□□ 1.11
CHD8-211ENST00000556833 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
CHD8-211ENST00000556833 FNBP4Q8N3X1 1017 aaPredicted RBP21.96■■□□□ 1.11
CHD8-211ENST00000556833 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
CHD8-211ENST00000556833 CFAP70Q5T0N1 1121 aa21.94■■□□□ 1.1
CHD8-211ENST00000556833 BCL9LQ86UU0 1499 aa21.94■■□□□ 1.1
CHD8-211ENST00000556833 EP400Q96L91 3159 aa21.91■■□□□ 1.1
CHD8-211ENST00000556833 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
CHD8-211ENST00000556833 USP32Q8NFA0 1604 aa21.9■■□□□ 1.1
CHD8-211ENST00000556833 SPATA31A3Q5VYP0 1347 aa21.89■■□□□ 1.1
CHD8-211ENST00000556833 LMOD2Q6P5Q4 547 aa21.89■■□□□ 1.09
CHD8-211ENST00000556833 CABLES1Q8TDN4 633 aa21.89■■□□□ 1.09
CHD8-211ENST00000556833 PRAM1Q96QH2 718 aa21.89■■□□□ 1.09
CHD8-211ENST00000556833 C14orf93Q9H972 538 aaKnown RBP21.89■■□□□ 1.09
CHD8-211ENST00000556833 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.89■■□□□ 1.09
CHD8-211ENST00000556833 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
CHD8-211ENST00000556833 ABCA3Q99758 1704 aa21.88■■□□□ 1.09
CHD8-211ENST00000556833 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
CHD8-211ENST00000556833 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CHD8-211ENST00000556833 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
CHD8-211ENST00000556833 GLI3P10071 1580 aa21.87■■□□□ 1.09
CHD8-211ENST00000556833 PHF8Q9UPP1 1060 aa21.87■■□□□ 1.09
CHD8-211ENST00000556833 BRWD3Q6RI45 1802 aa21.87■■□□□ 1.09
CHD8-211ENST00000556833 PLCH1Q4KWH8 1693 aa21.86■■□□□ 1.09
CHD8-211ENST00000556833 GJD4Q96KN9 370 aaPredicted RBP21.86■■□□□ 1.09
CHD8-211ENST00000556833 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
CHD8-211ENST00000556833 POGKQ9P215 609 aa21.85■■□□□ 1.09
CHD8-211ENST00000556833 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
CHD8-211ENST00000556833 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
CHD8-211ENST00000556833 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
CHD8-211ENST00000556833 UNC5CLQ8IV45 518 aa21.83■■□□□ 1.09
CHD8-211ENST00000556833 KDM2AQ9Y2K7 1162 aa21.83■■□□□ 1.09
CHD8-211ENST00000556833 SLIT2O94813 1529 aa21.83■■□□□ 1.09
CHD8-211ENST00000556833 TRAK1Q9UPV9 953 aa21.81■■□□□ 1.08
CHD8-211ENST00000556833 MINK1Q8N4C8 1332 aaPredicted RBP21.8■■□□□ 1.08
CHD8-211ENST00000556833 PSME1Q06323 249 aa21.8■■□□□ 1.08
CHD8-211ENST00000556833 CCDC9Q9Y3X0 531 aaKnown RBP21.8■■□□□ 1.08
CHD8-211ENST00000556833 SRCAPQ6ZRS2 3230 aa21.8■■□□□ 1.08
CHD8-211ENST00000556833 SIRT1Q96EB6 747 aa21.79■■□□□ 1.08
CHD8-211ENST00000556833 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
CHD8-211ENST00000556833 DLC1Q96QB1 1528 aa21.78■■□□□ 1.08
CHD8-211ENST00000556833 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
CHD8-211ENST00000556833 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.08
CHD8-211ENST00000556833 DCAF11Q8TEB1 546 aa21.76■■□□□ 1.07
CHD8-211ENST00000556833 NWD2Q9ULI1 1742 aa21.76■■□□□ 1.07
CHD8-211ENST00000556833 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
CHD8-211ENST00000556833 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
CHD8-211ENST00000556833 ANKARQ7Z5J8 1434 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 A0A0G2JS52 829 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 MYT1Q01538 1121 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 SEPT12Q8IYM1 358 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 ZRANB1Q9UGI0 708 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
CHD8-211ENST00000556833 ALS2Q96Q42 1657 aa21.72■■□□□ 1.07
CHD8-211ENST00000556833 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
CHD8-211ENST00000556833 DEFB132Q7Z7B7 95 aa21.71■■□□□ 1.07
CHD8-211ENST00000556833 ARHGEF28Q8N1W1 1705 aaKnown RBP21.71■■□□□ 1.07
CHD8-211ENST00000556833 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.07
CHD8-211ENST00000556833 FAM83GA6ND36 823 aa21.7■■□□□ 1.06
CHD8-211ENST00000556833 VPS72Q15906 364 aa21.7■■□□□ 1.06
CHD8-211ENST00000556833 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
CHD8-211ENST00000556833 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
CHD8-211ENST00000556833 BLMP54132 1417 aaPredicted RBP21.68■■□□□ 1.06
CHD8-211ENST00000556833 GPRASP1Q5JY77 1395 aa21.67■■□□□ 1.06
CHD8-211ENST00000556833 CCDC125Q86Z20 511 aa21.67■■□□□ 1.06
CHD8-211ENST00000556833 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
CHD8-211ENST00000556833 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
CHD8-211ENST00000556833 BTG4Q9NY30 223 aa21.66■■□□□ 1.06
CHD8-211ENST00000556833 COL14A1Q05707 1796 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms