RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 HNRNPUQ00839 825 aaKnown RBP eCLIP25.33■■□□□ 1.64
SDR39U1-218ENST00000556262 SLIT1O75093 1534 aa25.32■■□□□ 1.64
SDR39U1-218ENST00000556262 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
SDR39U1-218ENST00000556262 PLEKHG1Q9ULL1 1385 aa25.32■■□□□ 1.64
SDR39U1-218ENST00000556262 ARHGAP23Q9P227 1491 aa25.32■■□□□ 1.64
SDR39U1-218ENST00000556262 PLEKHH1Q9ULM0 1364 aa25.32■■□□□ 1.64
SDR39U1-218ENST00000556262 DLC1Q96QB1 1528 aa25.31■■□□□ 1.64
SDR39U1-218ENST00000556262 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
SDR39U1-218ENST00000556262 BRD4O60885 1362 aaPredicted RBP25.29■■□□□ 1.64
SDR39U1-218ENST00000556262 NLRP13Q86W25 1043 aa25.29■■□□□ 1.64
SDR39U1-218ENST00000556262 PUS7Q96PZ0 661 aaKnown RBP25.29■■□□□ 1.64
SDR39U1-218ENST00000556262 CEP170BQ9Y4F5 1589 aaPredicted RBP25.28■■□□□ 1.64
SDR39U1-218ENST00000556262 SLC26A8Q96RN1 970 aa25.28■■□□□ 1.64
SDR39U1-218ENST00000556262 PNISRQ8TF01 805 aaKnown RBP25.27■■□□□ 1.64
SDR39U1-218ENST00000556262 CDK19Q9BWU1 502 aa25.24■■□□□ 1.63
SDR39U1-218ENST00000556262 NPC1L1Q9UHC9 1359 aa25.23■■□□□ 1.63
SDR39U1-218ENST00000556262 MED14O60244 1454 aa25.23■■□□□ 1.63
SDR39U1-218ENST00000556262 KNDC1Q76NI1 1749 aa25.23■■□□□ 1.63
SDR39U1-218ENST00000556262 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
SDR39U1-218ENST00000556262 TECPR2O15040 1411 aa25.22■■□□□ 1.63
SDR39U1-218ENST00000556262 SETD1BQ9UPS6 1966 aaKnown RBP25.21■■□□□ 1.63
SDR39U1-218ENST00000556262 CPS1P31327 1500 aa25.2■■□□□ 1.62
SDR39U1-218ENST00000556262 PPP2R1AP30153 589 aa25.19■■□□□ 1.62
SDR39U1-218ENST00000556262 ROBO2Q9HCK4 1378 aa25.19■■□□□ 1.62
SDR39U1-218ENST00000556262 FAM135BQ49AJ0 1406 aa25.18■■□□□ 1.62
SDR39U1-218ENST00000556262 ATAD2Q6PL18 1390 aa25.18■■□□□ 1.62
SDR39U1-218ENST00000556262 ANKRD36BQ8N2N9 1353 aa25.18■■□□□ 1.62
SDR39U1-218ENST00000556262 PTPRUQ92729 1446 aa25.18■■□□□ 1.62
SDR39U1-218ENST00000556262 SIRT1Q96EB6 747 aa25.18■■□□□ 1.62
SDR39U1-218ENST00000556262 ZNF142P52746 1687 aaPredicted RBP25.16■■□□□ 1.62
SDR39U1-218ENST00000556262 TBX22Q9Y458 520 aa25.16■■□□□ 1.62
SDR39U1-218ENST00000556262 A0A1W2PP64 1363 aa25.14■■□□□ 1.62
SDR39U1-218ENST00000556262 NINLQ9Y2I6 1382 aa25.14■■□□□ 1.62
SDR39U1-218ENST00000556262 WASLO00401 505 aaPredicted RBP25.13■■□□□ 1.61
SDR39U1-218ENST00000556262 CABP1Q9NZU7 370 aa25.13■■□□□ 1.61
SDR39U1-218ENST00000556262 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
SDR39U1-218ENST00000556262 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
SDR39U1-218ENST00000556262 ANKLE2Q86XL3 938 aa25.11■■□□□ 1.61
SDR39U1-218ENST00000556262 SUPT16HQ9Y5B9 1047 aaKnown RBP25.11■■□□□ 1.61
SDR39U1-218ENST00000556262 CD163L1Q9NR16 1453 aa25.11■■□□□ 1.61
SDR39U1-218ENST00000556262 CGNL1Q0VF96 1302 aa25.1■■□□□ 1.61
SDR39U1-218ENST00000556262 USP32Q8NFA0 1604 aa25.09■■□□□ 1.61
SDR39U1-218ENST00000556262 DIP2AQ14689 1571 aa25.09■■□□□ 1.61
SDR39U1-218ENST00000556262 TERF2IPQ9NYB0 399 aa25.09■■□□□ 1.61
SDR39U1-218ENST00000556262 ZBED9Q6R2W3 1325 aa25.08■■□□□ 1.61
SDR39U1-218ENST00000556262 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.08■■□□□ 1.61
SDR39U1-218ENST00000556262 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
SDR39U1-218ENST00000556262 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
SDR39U1-218ENST00000556262 NCKAP5LQ9HCH0 1330 aa25.05■■□□□ 1.6
SDR39U1-218ENST00000556262 HDGFL2Q7Z4V5 671 aaPredicted RBP25.04■■□□□ 1.6
SDR39U1-218ENST00000556262 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
SDR39U1-218ENST00000556262 PPIP5K1Q6PFW1 1433 aa25.02■■□□□ 1.6
SDR39U1-218ENST00000556262 PTCH1Q13635 1447 aa25.01■■□□□ 1.59
SDR39U1-218ENST00000556262 PRR36Q9H6K5 1346 aa25■■□□□ 1.59
SDR39U1-218ENST00000556262 XRN1Q8IZH2 1706 aaKnown RBP25■■□□□ 1.59
SDR39U1-218ENST00000556262 KCNA6P17658 529 aa25■■□□□ 1.59
SDR39U1-218ENST00000556262 ADGRB2O60241 1585 aa25■■□□□ 1.59
SDR39U1-218ENST00000556262 NSD2O96028 1365 aa24.99■■□□□ 1.59
SDR39U1-218ENST00000556262 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
SDR39U1-218ENST00000556262 CCDC61Q9Y6R9 512 aa24.99■■□□□ 1.59
SDR39U1-218ENST00000556262 ATP7BP35670 1465 aa24.99■■□□□ 1.59
SDR39U1-218ENST00000556262 NUTM2FA1L443 756 aa24.98■■□□□ 1.59
SDR39U1-218ENST00000556262 ADAMTS8Q9UP79 889 aa24.98■■□□□ 1.59
SDR39U1-218ENST00000556262 FYB1O15117 783 aa24.98■■□□□ 1.59
SDR39U1-218ENST00000556262 PIK3R4Q99570 1358 aa24.97■■□□□ 1.59
SDR39U1-218ENST00000556262 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
SDR39U1-218ENST00000556262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
SDR39U1-218ENST00000556262 CPSF1Q10570 1443 aaKnown RBP24.94■■□□□ 1.58
SDR39U1-218ENST00000556262 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
SDR39U1-218ENST00000556262 BLMP54132 1417 aaPredicted RBP24.94■■□□□ 1.58
SDR39U1-218ENST00000556262 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
SDR39U1-218ENST00000556262 SALL2Q9Y467 1007 aaPredicted RBP24.93■■□□□ 1.58
SDR39U1-218ENST00000556262 MTHFSP49914 203 aa24.91■■□□□ 1.58
SDR39U1-218ENST00000556262 CDC42BPGQ6DT37 1551 aa24.91■■□□□ 1.58
SDR39U1-218ENST00000556262 KIF20BQ96Q89 1820 aa24.91■■□□□ 1.58
SDR39U1-218ENST00000556262 POLR3AO14802 1390 aaPredicted RBP24.9■■□□□ 1.58
SDR39U1-218ENST00000556262 INSRP06213 1382 aa24.9■■□□□ 1.58
SDR39U1-218ENST00000556262 ANKRD26Q9UPS8 1709 aa24.9■■□□□ 1.58
SDR39U1-218ENST00000556262 RBM33Q96EV2 1170 aaKnown RBP24.87■■□□□ 1.57
SDR39U1-218ENST00000556262 EDC4Q6P2E9 1401 aaKnown RBP24.87■■□□□ 1.57
SDR39U1-218ENST00000556262 TOPAZ1Q8N9V7 1692 aa24.87■■□□□ 1.57
SDR39U1-218ENST00000556262 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
SDR39U1-218ENST00000556262 AKAP12Q02952 1782 aa24.86■■□□□ 1.57
SDR39U1-218ENST00000556262 MON2Q7Z3U7 1717 aa24.86■■□□□ 1.57
SDR39U1-218ENST00000556262 KDM4FA0A1W2PPD8 638 aa24.85■■□□□ 1.57
SDR39U1-218ENST00000556262 NKTRP30414 1462 aaKnown RBP24.84■■□□□ 1.57
SDR39U1-218ENST00000556262 ACEP12821 1306 aa24.84■■□□□ 1.57
SDR39U1-218ENST00000556262 NME9Q86XW9 330 aa24.84■■□□□ 1.57
SDR39U1-218ENST00000556262 RGPD8O14715 1765 aaPredicted RBP24.84■■□□□ 1.57
SDR39U1-218ENST00000556262 PLEKHG3A1L390 1219 aa24.84■■□□□ 1.57
SDR39U1-218ENST00000556262 NEFLP07196 543 aa24.83■■□□□ 1.57
SDR39U1-218ENST00000556262 CCDC146Q8IYE0 955 aa24.83■■□□□ 1.57
SDR39U1-218ENST00000556262 ZNF692Q9BU19 519 aaPredicted RBP24.83■■□□□ 1.57
SDR39U1-218ENST00000556262 SHPRHQ149N8 1683 aa24.83■■□□□ 1.56
SDR39U1-218ENST00000556262 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
SDR39U1-218ENST00000556262 FBLN1P23142 703 aa24.81■■□□□ 1.56
SDR39U1-218ENST00000556262 MYT1Q01538 1121 aa24.81■■□□□ 1.56
SDR39U1-218ENST00000556262 PMFBP1Q8TBY8 1022 aa24.81■■□□□ 1.56
SDR39U1-218ENST00000556262 CFAP53Q96M91 514 aa24.8■■□□□ 1.56
SDR39U1-218ENST00000556262 SMG6Q86US8 1419 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms