RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 DZIP1LQ8IYY4 767 aaKnown RBP18.84■□□□□ 0.61
NEK9-209ENST00000556170 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.61
NEK9-209ENST00000556170 CFAP65Q6ZU64 1925 aaKnown RBP18.83■□□□□ 0.61
NEK9-209ENST00000556170 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
NEK9-209ENST00000556170 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
NEK9-209ENST00000556170 COG3Q96JB2 828 aa18.82■□□□□ 0.6
NEK9-209ENST00000556170 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
NEK9-209ENST00000556170 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
NEK9-209ENST00000556170 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
NEK9-209ENST00000556170 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
NEK9-209ENST00000556170 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
NEK9-209ENST00000556170 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
NEK9-209ENST00000556170 PDE3AQ14432 1141 aa18.78■□□□□ 0.6
NEK9-209ENST00000556170 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
NEK9-209ENST00000556170 CHD1O14646 1710 aa18.77■□□□□ 0.59
NEK9-209ENST00000556170 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
NEK9-209ENST00000556170 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
NEK9-209ENST00000556170 IGHDP01880 384 aa18.76■□□□□ 0.59
NEK9-209ENST00000556170 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
NEK9-209ENST00000556170 ASXL1Q8IXJ9 1541 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 LNPKQ9C0E8 428 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 MAST1Q9Y2H9 1570 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
NEK9-209ENST00000556170 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
NEK9-209ENST00000556170 ANKRD45Q5TZF3 282 aa18.74■□□□□ 0.59
NEK9-209ENST00000556170 RTF1Q92541 710 aaKnown RBP18.74■□□□□ 0.59
NEK9-209ENST00000556170 ATP10AO60312 1499 aa18.74■□□□□ 0.59
NEK9-209ENST00000556170 SLC26A8Q96RN1 970 aa18.74■□□□□ 0.59
NEK9-209ENST00000556170 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
NEK9-209ENST00000556170 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
NEK9-209ENST00000556170 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
NEK9-209ENST00000556170 ADCY10Q96PN6 1610 aa18.73■□□□□ 0.59
NEK9-209ENST00000556170 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
NEK9-209ENST00000556170 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
NEK9-209ENST00000556170 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
NEK9-209ENST00000556170 GZF1Q9H116 711 aaPredicted RBP18.72■□□□□ 0.59
NEK9-209ENST00000556170 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
NEK9-209ENST00000556170 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
NEK9-209ENST00000556170 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
NEK9-209ENST00000556170 ATP7AQ04656 1500 aa18.72■□□□□ 0.59
NEK9-209ENST00000556170 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
NEK9-209ENST00000556170 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
NEK9-209ENST00000556170 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
NEK9-209ENST00000556170 AMPHP49418 695 aa18.71■□□□□ 0.59
NEK9-209ENST00000556170 MYO5CQ9NQX4 1742 aa18.7■□□□□ 0.58
NEK9-209ENST00000556170 NECTIN2Q92692 538 aa18.7■□□□□ 0.58
NEK9-209ENST00000556170 EMILIN1Q9Y6C2 1016 aa18.7■□□□□ 0.58
NEK9-209ENST00000556170 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
NEK9-209ENST00000556170 NME9Q86XW9 330 aa18.69■□□□□ 0.58
NEK9-209ENST00000556170 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
NEK9-209ENST00000556170 FYB1O15117 783 aa18.69■□□□□ 0.58
NEK9-209ENST00000556170 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
NEK9-209ENST00000556170 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
NEK9-209ENST00000556170 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
NEK9-209ENST00000556170 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
NEK9-209ENST00000556170 HSCBQ8IWL3 235 aa18.68■□□□□ 0.58
NEK9-209ENST00000556170 RLBP1P12271 317 aa18.67■□□□□ 0.58
NEK9-209ENST00000556170 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
NEK9-209ENST00000556170 MVPQ14764 893 aaKnown RBP18.66■□□□□ 0.58
NEK9-209ENST00000556170 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
NEK9-209ENST00000556170 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
NEK9-209ENST00000556170 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
NEK9-209ENST00000556170 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
NEK9-209ENST00000556170 PCDHB15Q9Y5E8 787 aa18.65■□□□□ 0.58
NEK9-209ENST00000556170 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
NEK9-209ENST00000556170 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
NEK9-209ENST00000556170 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
NEK9-209ENST00000556170 ABCC1P33527 1531 aa18.64■□□□□ 0.57
NEK9-209ENST00000556170 SULT6B1Q6IMI4 303 aa18.64■□□□□ 0.57
NEK9-209ENST00000556170 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
NEK9-209ENST00000556170 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
NEK9-209ENST00000556170 LMOD3Q0VAK6 560 aa18.63■□□□□ 0.57
NEK9-209ENST00000556170 NPATQ14207 1427 aa18.63■□□□□ 0.57
NEK9-209ENST00000556170 FRAT2O75474 233 aaPredicted RBP18.63■□□□□ 0.57
NEK9-209ENST00000556170 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
NEK9-209ENST00000556170 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
NEK9-209ENST00000556170 ZCCHC11Q5TAX3 1644 aaKnown RBP18.63■□□□□ 0.57
NEK9-209ENST00000556170 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
NEK9-209ENST00000556170 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
NEK9-209ENST00000556170 GNAI1P63096 354 aa18.62■□□□□ 0.57
NEK9-209ENST00000556170 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
NEK9-209ENST00000556170 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
NEK9-209ENST00000556170 TRIM27P14373 513 aa18.6■□□□□ 0.57
NEK9-209ENST00000556170 TWISTNBQ3B726 338 aaPredicted RBP18.6■□□□□ 0.57
NEK9-209ENST00000556170 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
NEK9-209ENST00000556170 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
NEK9-209ENST00000556170 FCHSD2O94868 740 aa18.59■□□□□ 0.57
NEK9-209ENST00000556170 FAM83GA6ND36 823 aa18.58■□□□□ 0.57
NEK9-209ENST00000556170 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.56
NEK9-209ENST00000556170 GSE1Q14687 1217 aa18.58■□□□□ 0.56
NEK9-209ENST00000556170 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
NEK9-209ENST00000556170 UHRF1BP1LA0JNW5 1464 aa18.58■□□□□ 0.56
NEK9-209ENST00000556170 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
NEK9-209ENST00000556170 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
NEK9-209ENST00000556170 PTPRTO14522 1441 aa18.57■□□□□ 0.56
NEK9-209ENST00000556170 RBM33Q96EV2 1170 aaKnown RBP18.57■□□□□ 0.56
NEK9-209ENST00000556170 C22orf23Q9BZE7 217 aa18.57■□□□□ 0.56
NEK9-209ENST00000556170 PRDM15P57071 1507 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms