RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 RALGAPBQ86X10 1494 aa20.73■□□□□ 0.91
ABCD4-224ENST00000556119 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
ABCD4-224ENST00000556119 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
ABCD4-224ENST00000556119 SLIT2O94813 1529 aa20.67■□□□□ 0.9
ABCD4-224ENST00000556119 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
ABCD4-224ENST00000556119 SEPT12Q8IYM1 358 aa20.66■□□□□ 0.9
ABCD4-224ENST00000556119 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
ABCD4-224ENST00000556119 PXDNQ92626 1479 aa20.66■□□□□ 0.9
ABCD4-224ENST00000556119 NPHP3Q7Z494 1330 aa20.65■□□□□ 0.9
ABCD4-224ENST00000556119 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
ABCD4-224ENST00000556119 ESCO1Q5FWF5 840 aa20.62■□□□□ 0.89
ABCD4-224ENST00000556119 FOXO3O43524 673 aa20.61■□□□□ 0.89
ABCD4-224ENST00000556119 ONECUT3O60422 494 aaPredicted RBP20.61■□□□□ 0.89
ABCD4-224ENST00000556119 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
ABCD4-224ENST00000556119 NEXMIFQ5QGS0 1516 aa20.61■□□□□ 0.89
ABCD4-224ENST00000556119 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
ABCD4-224ENST00000556119 YY1P25490 414 aa20.59■□□□□ 0.89
ABCD4-224ENST00000556119 BAG6P46379 1132 aa20.59■□□□□ 0.89
ABCD4-224ENST00000556119 NUP155O75694 1391 aa20.59■□□□□ 0.89
ABCD4-224ENST00000556119 APLP2Q06481 763 aa20.58■□□□□ 0.89
ABCD4-224ENST00000556119 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
ABCD4-224ENST00000556119 VPS72Q15906 364 aa20.57■□□□□ 0.88
ABCD4-224ENST00000556119 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
ABCD4-224ENST00000556119 PRAG1Q86YV5 1406 aa20.55■□□□□ 0.88
ABCD4-224ENST00000556119 EN1Q05925 392 aaPredicted RBP20.55■□□□□ 0.88
ABCD4-224ENST00000556119 USP32Q8NFA0 1604 aa20.55■□□□□ 0.88
ABCD4-224ENST00000556119 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
ABCD4-224ENST00000556119 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
ABCD4-224ENST00000556119 NWD2Q9ULI1 1742 aa20.52■□□□□ 0.88
ABCD4-224ENST00000556119 SPATA31A3Q5VYP0 1347 aa20.52■□□□□ 0.87
ABCD4-224ENST00000556119 PLCH1Q4KWH8 1693 aa20.51■□□□□ 0.87
ABCD4-224ENST00000556119 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
ABCD4-224ENST00000556119 CLTCL1P53675 1640 aa20.51■□□□□ 0.87
ABCD4-224ENST00000556119 RGPD1P0DJD0 1748 aa20.5■□□□□ 0.87
ABCD4-224ENST00000556119 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
ABCD4-224ENST00000556119 KIF1BO60333 1816 aa20.5■□□□□ 0.87
ABCD4-224ENST00000556119 NUTM2FA1L443 756 aa20.48■□□□□ 0.87
ABCD4-224ENST00000556119 ROCK1Q13464 1354 aa20.46■□□□□ 0.87
ABCD4-224ENST00000556119 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-224ENST00000556119 CABLES1Q8TDN4 633 aa20.46■□□□□ 0.87
ABCD4-224ENST00000556119 A0A0G2JS52 829 aa20.44■□□□□ 0.86
ABCD4-224ENST00000556119 MYT1Q01538 1121 aa20.44■□□□□ 0.86
ABCD4-224ENST00000556119 FAM182BQ5T319 152 aa20.44■□□□□ 0.86
ABCD4-224ENST00000556119 TNS1Q9HBL0 1735 aaKnown RBP20.44■□□□□ 0.86
ABCD4-224ENST00000556119 NAIPQ13075 1403 aa20.44■□□□□ 0.86
ABCD4-224ENST00000556119 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
ABCD4-224ENST00000556119 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
ABCD4-224ENST00000556119 KRT28Q7Z3Y7 464 aa20.43■□□□□ 0.86
ABCD4-224ENST00000556119 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
ABCD4-224ENST00000556119 HAP1P54257 671 aaPredicted RBP20.42■□□□□ 0.86
ABCD4-224ENST00000556119 UTRNP46939 3433 aa20.42■□□□□ 0.86
ABCD4-224ENST00000556119 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
ABCD4-224ENST00000556119 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
ABCD4-224ENST00000556119 FAM83GA6ND36 823 aa20.4■□□□□ 0.86
ABCD4-224ENST00000556119 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
ABCD4-224ENST00000556119 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
ABCD4-224ENST00000556119 RGPD8O14715 1765 aaPredicted RBP20.39■□□□□ 0.86
ABCD4-224ENST00000556119 NRAPQ86VF7 1730 aa20.39■□□□□ 0.86
ABCD4-224ENST00000556119 WAPLQ7Z5K2 1190 aa20.39■□□□□ 0.85
ABCD4-224ENST00000556119 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.85
ABCD4-224ENST00000556119 CAMKK2Q96RR4 588 aa20.38■□□□□ 0.85
ABCD4-224ENST00000556119 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
ABCD4-224ENST00000556119 PPLO60437 1756 aa20.36■□□□□ 0.85
ABCD4-224ENST00000556119 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.85
ABCD4-224ENST00000556119 BTG4Q9NY30 223 aa20.33■□□□□ 0.85
ABCD4-224ENST00000556119 STK26Q9P289 416 aa20.33■□□□□ 0.85
ABCD4-224ENST00000556119 PLEKHH1Q9ULM0 1364 aa20.33■□□□□ 0.84
ABCD4-224ENST00000556119 PSME1Q06323 249 aa20.32■□□□□ 0.84
ABCD4-224ENST00000556119 THSD7AQ9UPZ6 1657 aa20.32■□□□□ 0.84
ABCD4-224ENST00000556119 TECPR2O15040 1411 aa20.31■□□□□ 0.84
ABCD4-224ENST00000556119 LMOD2Q6P5Q4 547 aa20.31■□□□□ 0.84
ABCD4-224ENST00000556119 RREB1Q92766 1687 aa20.3■□□□□ 0.84
ABCD4-224ENST00000556119 TRIM37O94972 964 aa20.3■□□□□ 0.84
ABCD4-224ENST00000556119 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
ABCD4-224ENST00000556119 PHF8Q9UPP1 1060 aa20.3■□□□□ 0.84
ABCD4-224ENST00000556119 SBNO1A3KN83 1393 aa20.3■□□□□ 0.84
ABCD4-224ENST00000556119 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
ABCD4-224ENST00000556119 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
ABCD4-224ENST00000556119 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
ABCD4-224ENST00000556119 ADGRB2O60241 1585 aa20.29■□□□□ 0.84
ABCD4-224ENST00000556119 NUP188Q5SRE5 1749 aa20.28■□□□□ 0.84
ABCD4-224ENST00000556119 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
ABCD4-224ENST00000556119 ITGAEP38570 1179 aa20.28■□□□□ 0.84
ABCD4-224ENST00000556119 COL14A1Q05707 1796 aaKnown RBP20.27■□□□□ 0.84
ABCD4-224ENST00000556119 ARHGEF10O15013 1369 aa20.27■□□□□ 0.84
ABCD4-224ENST00000556119 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.84
ABCD4-224ENST00000556119 APBA3O96018 575 aa20.27■□□□□ 0.84
ABCD4-224ENST00000556119 PPP1R1BQ9UD71 204 aaPredicted RBP20.27■□□□□ 0.84
ABCD4-224ENST00000556119 IFT172Q9UG01 1749 aa20.27■□□□□ 0.83
ABCD4-224ENST00000556119 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
ABCD4-224ENST00000556119 KNDC1Q76NI1 1749 aa20.26■□□□□ 0.83
ABCD4-224ENST00000556119 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
ABCD4-224ENST00000556119 FAM196AQ6ZSG2 479 aa20.25■□□□□ 0.83
ABCD4-224ENST00000556119 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
ABCD4-224ENST00000556119 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
ABCD4-224ENST00000556119 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
ABCD4-224ENST00000556119 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
ABCD4-224ENST00000556119 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
ABCD4-224ENST00000556119 KCNQ2O43526 872 aa20.23■□□□□ 0.83
ABCD4-224ENST00000556119 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms