RNA–Protein interactions for RNA: ENST00000556097.5

LGMN-212, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-212ENST00000556097 CFAP70Q5T0N1 1121 aa22.94■■□□□ 1.26
LGMN-212ENST00000556097 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
LGMN-212ENST00000556097 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
LGMN-212ENST00000556097 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
LGMN-212ENST00000556097 ABCC11Q96J66 1382 aa22.9■■□□□ 1.26
LGMN-212ENST00000556097 SOS2Q07890 1332 aaPredicted RBP22.9■■□□□ 1.26
LGMN-212ENST00000556097 CDC42BPGQ6DT37 1551 aa22.9■■□□□ 1.26
LGMN-212ENST00000556097 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
LGMN-212ENST00000556097 C14orf93Q9H972 538 aaKnown RBP22.9■■□□□ 1.26
LGMN-212ENST00000556097 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
LGMN-212ENST00000556097 LRRC59Q96AG4 307 aaKnown RBP22.87■■□□□ 1.25
LGMN-212ENST00000556097 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
LGMN-212ENST00000556097 MYOM2P54296 1465 aa22.85■■□□□ 1.25
LGMN-212ENST00000556097 PXDNQ92626 1479 aa22.85■■□□□ 1.25
LGMN-212ENST00000556097 AFF2P51816 1311 aa22.85■■□□□ 1.25
LGMN-212ENST00000556097 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
LGMN-212ENST00000556097 ADGRB1O14514 1584 aa22.84■■□□□ 1.25
LGMN-212ENST00000556097 SAFB2Q14151 953 aaKnown RBP eCLIP22.83■■□□□ 1.25
LGMN-212ENST00000556097 ESCO1Q5FWF5 840 aa22.83■■□□□ 1.25
LGMN-212ENST00000556097 DHX57Q6P158 1386 aaKnown RBP22.83■■□□□ 1.25
LGMN-212ENST00000556097 FOXO3O43524 673 aa22.82■■□□□ 1.24
LGMN-212ENST00000556097 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
LGMN-212ENST00000556097 C8orf37Q96NL8 207 aa22.81■■□□□ 1.24
LGMN-212ENST00000556097 KDM2AQ9Y2K7 1162 aa22.8■■□□□ 1.24
LGMN-212ENST00000556097 USP32Q8NFA0 1604 aa22.78■■□□□ 1.24
LGMN-212ENST00000556097 PRAM1Q96QH2 718 aa22.77■■□□□ 1.24
LGMN-212ENST00000556097 COL22A1Q8NFW1 1626 aaPredicted RBP22.77■■□□□ 1.24
LGMN-212ENST00000556097 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
LGMN-212ENST00000556097 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
LGMN-212ENST00000556097 SIRT1Q96EB6 747 aa22.73■■□□□ 1.23
LGMN-212ENST00000556097 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
LGMN-212ENST00000556097 RGS12O14924 1447 aa22.73■■□□□ 1.23
LGMN-212ENST00000556097 HIRIP3Q9BW71 556 aaPredicted RBP22.72■■□□□ 1.23
LGMN-212ENST00000556097 RXRBP28702 533 aa22.71■■□□□ 1.23
LGMN-212ENST00000556097 QTRT2Q9H974 415 aaKnown RBP22.71■■□□□ 1.23
LGMN-212ENST00000556097 PRR36Q9H6K5 1346 aa22.71■■□□□ 1.23
LGMN-212ENST00000556097 HRCP23327 699 aa22.7■■□□□ 1.22
LGMN-212ENST00000556097 UPF1Q92900 1129 aaKnown RBP eCLIP22.7■■□□□ 1.22
LGMN-212ENST00000556097 NGLY1Q96IV0 654 aa22.7■■□□□ 1.22
LGMN-212ENST00000556097 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
LGMN-212ENST00000556097 DLC1Q96QB1 1528 aa22.7■■□□□ 1.22
LGMN-212ENST00000556097 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
LGMN-212ENST00000556097 CABLES1Q8TDN4 633 aa22.67■■□□□ 1.22
LGMN-212ENST00000556097 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
LGMN-212ENST00000556097 MINK1Q8N4C8 1332 aaPredicted RBP22.66■■□□□ 1.22
LGMN-212ENST00000556097 PLEKHG5O94827 1062 aa22.66■■□□□ 1.22
LGMN-212ENST00000556097 KRT28Q7Z3Y7 464 aa22.66■■□□□ 1.22
LGMN-212ENST00000556097 FNBP4Q8N3X1 1017 aaPredicted RBP22.66■■□□□ 1.22
LGMN-212ENST00000556097 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
LGMN-212ENST00000556097 MARF1Q9Y4F3 1742 aaKnown RBP22.65■■□□□ 1.22
LGMN-212ENST00000556097 PHF8Q9UPP1 1060 aa22.65■■□□□ 1.22
LGMN-212ENST00000556097 ADGRB2O60241 1585 aa22.64■■□□□ 1.22
LGMN-212ENST00000556097 ACIN1Q9UKV3 1341 aaKnown RBP22.64■■□□□ 1.22
LGMN-212ENST00000556097 USP21Q9UK80 565 aa22.64■■□□□ 1.21
LGMN-212ENST00000556097 KIF1AQ12756 1690 aa22.64■■□□□ 1.21
LGMN-212ENST00000556097 ARHGEF28Q8N1W1 1705 aaKnown RBP22.63■■□□□ 1.21
LGMN-212ENST00000556097 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
LGMN-212ENST00000556097 NBPF1Q3BBV0 1214 aa22.63■■□□□ 1.21
LGMN-212ENST00000556097 ATRNO75882 1429 aa22.63■■□□□ 1.21
LGMN-212ENST00000556097 POGKQ9P215 609 aa22.62■■□□□ 1.21
LGMN-212ENST00000556097 RBM6P78332 1123 aaKnown RBP22.61■■□□□ 1.21
LGMN-212ENST00000556097 ABCA3Q99758 1704 aa22.6■■□□□ 1.21
LGMN-212ENST00000556097 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
LGMN-212ENST00000556097 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
LGMN-212ENST00000556097 SIN3AQ96ST3 1273 aa22.57■■□□□ 1.2
LGMN-212ENST00000556097 SLIT2O94813 1529 aa22.56■■□□□ 1.2
LGMN-212ENST00000556097 GLI3P10071 1580 aa22.55■■□□□ 1.2
LGMN-212ENST00000556097 WASLO00401 505 aaPredicted RBP22.55■■□□□ 1.2
LGMN-212ENST00000556097 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
LGMN-212ENST00000556097 TULP4Q9NRJ4 1543 aa22.53■■□□□ 1.2
LGMN-212ENST00000556097 ALS2Q96Q42 1657 aa22.52■■□□□ 1.2
LGMN-212ENST00000556097 TRPC5Q9UL62 973 aaPredicted RBP22.52■■□□□ 1.2
LGMN-212ENST00000556097 ATP7BP35670 1465 aa22.52■■□□□ 1.2
LGMN-212ENST00000556097 SBNO1A3KN83 1393 aa22.51■■□□□ 1.19
LGMN-212ENST00000556097 PSME1Q06323 249 aa22.5■■□□□ 1.19
LGMN-212ENST00000556097 LMOD2Q6P5Q4 547 aa22.5■■□□□ 1.19
LGMN-212ENST00000556097 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
LGMN-212ENST00000556097 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
LGMN-212ENST00000556097 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.48■■□□□ 1.19
LGMN-212ENST00000556097 RALGAPBQ86X10 1494 aa22.48■■□□□ 1.19
LGMN-212ENST00000556097 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
LGMN-212ENST00000556097 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
LGMN-212ENST00000556097 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
LGMN-212ENST00000556097 KIAA1210Q9ULL0 1709 aa22.47■■□□□ 1.19
LGMN-212ENST00000556097 EP400Q96L91 3159 aa22.47■■□□□ 1.19
LGMN-212ENST00000556097 BRWD3Q6RI45 1802 aa22.46■■□□□ 1.19
LGMN-212ENST00000556097 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
LGMN-212ENST00000556097 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
LGMN-212ENST00000556097 CDK19Q9BWU1 502 aa22.46■■□□□ 1.19
LGMN-212ENST00000556097 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
LGMN-212ENST00000556097 STAC3Q96MF2 364 aa22.43■■□□□ 1.18
LGMN-212ENST00000556097 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
LGMN-212ENST00000556097 NUTM2GQ5VZR2 741 aa22.4■■□□□ 1.18
LGMN-212ENST00000556097 ARHGEF10O15013 1369 aa22.39■■□□□ 1.18
LGMN-212ENST00000556097 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
LGMN-212ENST00000556097 NBPF8Q3BBV2 869 aa22.39■■□□□ 1.17
LGMN-212ENST00000556097 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.17
LGMN-212ENST00000556097 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
LGMN-212ENST00000556097 CABP2Q9NPB3 220 aa22.37■■□□□ 1.17
LGMN-212ENST00000556097 TRPM1Q7Z4N2 1603 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms