RNA–Protein interactions for RNA: ENST00000556033.5

LINC01146-204, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 1 (best) BASIC

Gene LINC01146, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-204ENST00000556033 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
LINC01146-204ENST00000556033 RGS12O14924 1447 aa15.04■□□□□ -0
LINC01146-204ENST00000556033 MST1RQ04912 1400 aa15.04■□□□□ -0
LINC01146-204ENST00000556033 NUP155O75694 1391 aa15.04■□□□□ -0
LINC01146-204ENST00000556033 ADAMTS2O95450 1211 aa15.04■□□□□ -0
LINC01146-204ENST00000556033 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
LINC01146-204ENST00000556033 ITGAEP38570 1179 aa15.02■□□□□ -0
LINC01146-204ENST00000556033 SETBP1Q9Y6X0 1596 aa15.02□□□□□ -0.01
LINC01146-204ENST00000556033 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
LINC01146-204ENST00000556033 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
LINC01146-204ENST00000556033 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
LINC01146-204ENST00000556033 USP21Q9UK80 565 aa14.99□□□□□ -0.01
LINC01146-204ENST00000556033 EP400Q96L91 3159 aa14.99□□□□□ -0.01
LINC01146-204ENST00000556033 METP08581 1390 aa14.98□□□□□ -0.01
LINC01146-204ENST00000556033 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
LINC01146-204ENST00000556033 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
LINC01146-204ENST00000556033 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.01
LINC01146-204ENST00000556033 MARF1Q9Y4F3 1742 aaKnown RBP14.95□□□□□ -0.02
LINC01146-204ENST00000556033 C1orf167Q5SNV9 1468 aa14.94□□□□□ -0.02
LINC01146-204ENST00000556033 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
LINC01146-204ENST00000556033 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
LINC01146-204ENST00000556033 LAMC1P11047 1609 aa14.92□□□□□ -0.02
LINC01146-204ENST00000556033 ORAI2Q96SN7 254 aa14.92□□□□□ -0.02
LINC01146-204ENST00000556033 PTCH1Q13635 1447 aa14.91□□□□□ -0.02
LINC01146-204ENST00000556033 SOS2Q07890 1332 aaPredicted RBP14.9□□□□□ -0.02
LINC01146-204ENST00000556033 COL22A1Q8NFW1 1626 aaPredicted RBP14.89□□□□□ -0.03
LINC01146-204ENST00000556033 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
LINC01146-204ENST00000556033 CCDC125Q86Z20 511 aa14.88□□□□□ -0.03
LINC01146-204ENST00000556033 FNBP4Q8N3X1 1017 aaPredicted RBP14.88□□□□□ -0.03
LINC01146-204ENST00000556033 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
LINC01146-204ENST00000556033 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
LINC01146-204ENST00000556033 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
LINC01146-204ENST00000556033 ATRNO75882 1429 aa14.86□□□□□ -0.03
LINC01146-204ENST00000556033 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
LINC01146-204ENST00000556033 BRWD3Q6RI45 1802 aa14.85□□□□□ -0.03
LINC01146-204ENST00000556033 NPHP3Q7Z494 1330 aa14.85□□□□□ -0.03
LINC01146-204ENST00000556033 PPLO60437 1756 aa14.85□□□□□ -0.03
LINC01146-204ENST00000556033 HFM1A2PYH4 1435 aa14.83□□□□□ -0.03
LINC01146-204ENST00000556033 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.83□□□□□ -0.03
LINC01146-204ENST00000556033 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
LINC01146-204ENST00000556033 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
LINC01146-204ENST00000556033 GJD4Q96KN9 370 aaPredicted RBP14.83□□□□□ -0.04
LINC01146-204ENST00000556033 FOXO3O43524 673 aa14.82□□□□□ -0.04
LINC01146-204ENST00000556033 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
LINC01146-204ENST00000556033 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
LINC01146-204ENST00000556033 NUTM2FA1L443 756 aa14.81□□□□□ -0.04
LINC01146-204ENST00000556033 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
LINC01146-204ENST00000556033 MYOM2P54296 1465 aa14.8□□□□□ -0.04
LINC01146-204ENST00000556033 BCL9LQ86UU0 1499 aa14.8□□□□□ -0.04
LINC01146-204ENST00000556033 CDC42BPGQ6DT37 1551 aa14.8□□□□□ -0.04
LINC01146-204ENST00000556033 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
LINC01146-204ENST00000556033 RPGRIP1LQ68CZ1 1315 aa14.79□□□□□ -0.04
LINC01146-204ENST00000556033 PXDNQ92626 1479 aa14.78□□□□□ -0.04
LINC01146-204ENST00000556033 STK26Q9P289 416 aa14.78□□□□□ -0.04
LINC01146-204ENST00000556033 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.04
LINC01146-204ENST00000556033 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
LINC01146-204ENST00000556033 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
LINC01146-204ENST00000556033 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.05
LINC01146-204ENST00000556033 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
LINC01146-204ENST00000556033 KIF1AQ12756 1690 aa14.76□□□□□ -0.05
LINC01146-204ENST00000556033 GLI3P10071 1580 aa14.76□□□□□ -0.05
LINC01146-204ENST00000556033 ZBTB22O15209 634 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 DEFB132Q7Z7B7 95 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 RALGAPBQ86X10 1494 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 FMN2Q9NZ56 1722 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 NAIPQ13075 1403 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 PRAG1Q86YV5 1406 aa14.75□□□□□ -0.05
LINC01146-204ENST00000556033 A0A0G2JS52 829 aa14.74□□□□□ -0.05
LINC01146-204ENST00000556033 MYT1Q01538 1121 aa14.74□□□□□ -0.05
LINC01146-204ENST00000556033 IFT172Q9UG01 1749 aa14.74□□□□□ -0.05
LINC01146-204ENST00000556033 PLCH1Q4KWH8 1693 aa14.74□□□□□ -0.05
LINC01146-204ENST00000556033 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
LINC01146-204ENST00000556033 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
LINC01146-204ENST00000556033 KNDC1Q76NI1 1749 aa14.72□□□□□ -0.05
LINC01146-204ENST00000556033 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
LINC01146-204ENST00000556033 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
LINC01146-204ENST00000556033 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
LINC01146-204ENST00000556033 SEPT12Q8IYM1 358 aa14.72□□□□□ -0.05
LINC01146-204ENST00000556033 RGL3Q3MIN7 710 aa14.71□□□□□ -0.05
LINC01146-204ENST00000556033 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
LINC01146-204ENST00000556033 SLIT2O94813 1529 aa14.71□□□□□ -0.06
LINC01146-204ENST00000556033 SPATA31A3Q5VYP0 1347 aa14.7□□□□□ -0.06
LINC01146-204ENST00000556033 PSME1Q06323 249 aa14.7□□□□□ -0.06
LINC01146-204ENST00000556033 LRP5O75197 1615 aa14.7□□□□□ -0.06
LINC01146-204ENST00000556033 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
LINC01146-204ENST00000556033 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
LINC01146-204ENST00000556033 RRBP1Q9P2E9 1410 aaKnown RBP14.68□□□□□ -0.06
LINC01146-204ENST00000556033 TMEM132EQ6IEE7 984 aa14.68□□□□□ -0.06
LINC01146-204ENST00000556033 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
LINC01146-204ENST00000556033 ADGRF5Q8IZF2 1346 aa14.67□□□□□ -0.06
LINC01146-204ENST00000556033 ABCA3Q99758 1704 aa14.67□□□□□ -0.06
LINC01146-204ENST00000556033 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
LINC01146-204ENST00000556033 BAG6P46379 1132 aa14.67□□□□□ -0.06
LINC01146-204ENST00000556033 VPS72Q15906 364 aa14.67□□□□□ -0.06
LINC01146-204ENST00000556033 PLEKHH1Q9ULM0 1364 aa14.66□□□□□ -0.06
LINC01146-204ENST00000556033 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
LINC01146-204ENST00000556033 RGPD1P0DJD0 1748 aa14.66□□□□□ -0.06
LINC01146-204ENST00000556033 TECPR2O15040 1411 aa14.66□□□□□ -0.06
LINC01146-204ENST00000556033 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
LINC01146-204ENST00000556033 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms