RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SAFB2Q14151 953 aaKnown RBP eCLIP31.51■■■□□ 2.63
STRN3-207ENST00000555358 NOP58Q9Y2X3 529 aaKnown RBP31.51■■■□□ 2.63
STRN3-207ENST00000555358 NRXN3Q9Y4C0 1643 aa31.5■■■□□ 2.63
STRN3-207ENST00000555358 RRP1P56182 461 aaKnown RBP31.5■■■□□ 2.63
STRN3-207ENST00000555358 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.48■■■□□ 2.63
STRN3-207ENST00000555358 NLRP1Q9C000 1473 aa31.47■■■□□ 2.63
STRN3-207ENST00000555358 TMEM2Q9UHN6 1383 aa31.47■■■□□ 2.63
STRN3-207ENST00000555358 TULP4Q9NRJ4 1543 aa31.45■■■□□ 2.62
STRN3-207ENST00000555358 KNSTRNQ9Y448 316 aa31.44■■■□□ 2.62
STRN3-207ENST00000555358 PAK3O75914 559 aaPredicted RBP31.43■■■□□ 2.62
STRN3-207ENST00000555358 PRAM1Q96QH2 718 aa31.43■■■□□ 2.62
STRN3-207ENST00000555358 PDE3BQ13370 1112 aa31.43■■■□□ 2.62
STRN3-207ENST00000555358 RCAN3Q9UKA8 241 aa31.43■■■□□ 2.62
STRN3-207ENST00000555358 AMER1Q5JTC6 1135 aaPredicted RBP31.4■■■□□ 2.62
STRN3-207ENST00000555358 RIMS1Q86UR5 1692 aaKnown RBP31.4■■■□□ 2.62
STRN3-207ENST00000555358 HDGFP51858 240 aaKnown RBP31.4■■■□□ 2.62
STRN3-207ENST00000555358 EVC2Q86UK5 1308 aa31.39■■■□□ 2.62
STRN3-207ENST00000555358 EXOC6Q8TAG9 804 aa31.39■■■□□ 2.62
STRN3-207ENST00000555358 INSRP06213 1382 aa31.39■■■□□ 2.62
STRN3-207ENST00000555358 POGKQ9P215 609 aa31.38■■■□□ 2.61
STRN3-207ENST00000555358 METP08581 1390 aa31.38■■■□□ 2.61
STRN3-207ENST00000555358 CARD14Q9BXL6 1004 aa31.37■■■□□ 2.61
STRN3-207ENST00000555358 LTKP29376 864 aa31.37■■■□□ 2.61
STRN3-207ENST00000555358 BLMP54132 1417 aaPredicted RBP31.37■■■□□ 2.61
STRN3-207ENST00000555358 IPO9Q96P70 1041 aaKnown RBP31.36■■■□□ 2.61
STRN3-207ENST00000555358 SLC12A5Q9H2X9 1139 aa31.36■■■□□ 2.61
STRN3-207ENST00000555358 MINK1Q8N4C8 1332 aaPredicted RBP31.36■■■□□ 2.61
STRN3-207ENST00000555358 ANP32AP39687 249 aaKnown RBP31.36■■■□□ 2.61
STRN3-207ENST00000555358 CABP2Q9NPB3 220 aa31.35■■■□□ 2.61
STRN3-207ENST00000555358 SALL2Q9Y467 1007 aaPredicted RBP31.34■■■□□ 2.61
STRN3-207ENST00000555358 WAPLQ7Z5K2 1190 aa31.32■■■□□ 2.6
STRN3-207ENST00000555358 DLC1Q96QB1 1528 aa31.31■■■□□ 2.6
STRN3-207ENST00000555358 TXNDC2Q86VQ3 553 aa31.3■■■□□ 2.6
STRN3-207ENST00000555358 PLEKHH1Q9ULM0 1364 aa31.3■■■□□ 2.6
STRN3-207ENST00000555358 ADAMTSL3P82987 1691 aa31.3■■■□□ 2.6
STRN3-207ENST00000555358 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
STRN3-207ENST00000555358 CDCA7LQ96GN5 454 aa31.29■■■□□ 2.6
STRN3-207ENST00000555358 PUS7Q96PZ0 661 aaKnown RBP31.28■■■□□ 2.6
STRN3-207ENST00000555358 ADAMTS13Q76LX8 1427 aa31.28■■■□□ 2.6
STRN3-207ENST00000555358 SLIT1O75093 1534 aa31.27■■■□□ 2.6
STRN3-207ENST00000555358 SRPK2P78362 688 aaKnown RBP31.27■■■□□ 2.6
STRN3-207ENST00000555358 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
STRN3-207ENST00000555358 PLEKHG1Q9ULL1 1385 aa31.27■■■□□ 2.6
STRN3-207ENST00000555358 NPC1L1Q9UHC9 1359 aa31.26■■■□□ 2.59
STRN3-207ENST00000555358 TCERG1O14776 1098 aaKnown RBP31.24■■■□□ 2.59
STRN3-207ENST00000555358 EID1Q9Y6B2 187 aa31.24■■■□□ 2.59
STRN3-207ENST00000555358 NSD3Q9BZ95 1437 aa31.23■■■□□ 2.59
STRN3-207ENST00000555358 DEKP35659 375 aaKnown RBP31.22■■■□□ 2.59
STRN3-207ENST00000555358 THEMISQ8N1K5 641 aaPredicted RBP31.22■■■□□ 2.59
STRN3-207ENST00000555358 KNDC1Q76NI1 1749 aa31.22■■■□□ 2.59
STRN3-207ENST00000555358 PPP2R1AP30153 589 aa31.21■■■□□ 2.59
STRN3-207ENST00000555358 CEP170BQ9Y4F5 1589 aaPredicted RBP31.21■■■□□ 2.59
STRN3-207ENST00000555358 CDK19Q9BWU1 502 aa31.2■■■□□ 2.59
STRN3-207ENST00000555358 NBR1Q14596 966 aa31.2■■■□□ 2.58
STRN3-207ENST00000555358 SLC26A8Q96RN1 970 aa31.2■■■□□ 2.58
STRN3-207ENST00000555358 ZBTB47Q9UFB7 747 aaPredicted RBP31.19■■■□□ 2.58
STRN3-207ENST00000555358 TECPR2O15040 1411 aa31.17■■■□□ 2.58
STRN3-207ENST00000555358 MED14O60244 1454 aa31.17■■■□□ 2.58
STRN3-207ENST00000555358 ANKRD36BQ8N2N9 1353 aa31.16■■■□□ 2.58
STRN3-207ENST00000555358 CPS1P31327 1500 aa31.16■■■□□ 2.58
STRN3-207ENST00000555358 ATAD2Q6PL18 1390 aa31.15■■■□□ 2.58
STRN3-207ENST00000555358 MS4A1P11836 297 aa31.13■■■□□ 2.57
STRN3-207ENST00000555358 PDE4AP27815 886 aa31.13■■■□□ 2.57
STRN3-207ENST00000555358 FAM135BQ49AJ0 1406 aa31.13■■■□□ 2.57
STRN3-207ENST00000555358 ROBO2Q9HCK4 1378 aa31.12■■■□□ 2.57
STRN3-207ENST00000555358 A0A1W2PP64 1363 aa31.12■■■□□ 2.57
STRN3-207ENST00000555358 PLIN1O60240 522 aa31.12■■■□□ 2.57
STRN3-207ENST00000555358 USP32Q8NFA0 1604 aa31.11■■■□□ 2.57
STRN3-207ENST00000555358 PTPRUQ92729 1446 aa31.11■■■□□ 2.57
STRN3-207ENST00000555358 NINLQ9Y2I6 1382 aa31.11■■■□□ 2.57
STRN3-207ENST00000555358 BACH2Q9BYV9 841 aa31.1■■■□□ 2.57
STRN3-207ENST00000555358 SIRT1Q96EB6 747 aa31.1■■■□□ 2.57
STRN3-207ENST00000555358 SETD1BQ9UPS6 1966 aaKnown RBP31.09■■■□□ 2.57
STRN3-207ENST00000555358 CD163L1Q9NR16 1453 aa31.08■■■□□ 2.57
STRN3-207ENST00000555358 CRBNQ96SW2 442 aa31.07■■■□□ 2.56
STRN3-207ENST00000555358 ADAMTS8Q9UP79 889 aa31.07■■■□□ 2.56
STRN3-207ENST00000555358 ZNF142P52746 1687 aaPredicted RBP31.07■■■□□ 2.56
STRN3-207ENST00000555358 CGNL1Q0VF96 1302 aa31.06■■■□□ 2.56
STRN3-207ENST00000555358 WASLO00401 505 aaPredicted RBP31.06■■■□□ 2.56
STRN3-207ENST00000555358 CABP1Q9NZU7 370 aa31.06■■■□□ 2.56
STRN3-207ENST00000555358 TBX22Q9Y458 520 aa31.05■■■□□ 2.56
STRN3-207ENST00000555358 MORC1Q86VD1 984 aa31.03■■■□□ 2.56
STRN3-207ENST00000555358 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.02■■■□□ 2.56
STRN3-207ENST00000555358 TNNT2P45379 298 aaPredicted RBP31.02■■■□□ 2.56
STRN3-207ENST00000555358 NPM2Q86SE8 214 aaKnown RBP31.02■■■□□ 2.56
STRN3-207ENST00000555358 TERF2IPQ9NYB0 399 aa31.01■■■□□ 2.56
STRN3-207ENST00000555358 AMOTL2Q9Y2J4 779 aa31.01■■■□□ 2.56
STRN3-207ENST00000555358 DIP2AQ14689 1571 aa30.99■■■□□ 2.55
STRN3-207ENST00000555358 ZNF521Q96K83 1311 aa30.97■■■□□ 2.55
STRN3-207ENST00000555358 C20orf194Q5TEA3 1177 aa30.97■■■□□ 2.55
STRN3-207ENST00000555358 NCKAP5LQ9HCH0 1330 aa30.96■■■□□ 2.55
STRN3-207ENST00000555358 HDGFL2Q7Z4V5 671 aaPredicted RBP30.96■■■□□ 2.55
STRN3-207ENST00000555358 DUSP27Q5VZP5 1158 aa30.95■■■□□ 2.55
STRN3-207ENST00000555358 ANKLE2Q86XL3 938 aa30.94■■■□□ 2.54
STRN3-207ENST00000555358 NUDT16Q96DE0 195 aaKnown RBP30.94■■■□□ 2.54
STRN3-207ENST00000555358 NSD2O96028 1365 aa30.94■■■□□ 2.54
STRN3-207ENST00000555358 PPIP5K1Q6PFW1 1433 aa30.93■■■□□ 2.54
STRN3-207ENST00000555358 WDR43Q15061 677 aaKnown RBP eCLIP30.93■■■□□ 2.544e-6■■□□□ 14
STRN3-207ENST00000555358 RTL5Q5HYW3 569 aaPredicted RBP30.93■■■□□ 2.54
STRN3-207ENST00000555358 ADGRB2O60241 1585 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms