RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
PRKCH-213ENST00000555185 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
PRKCH-213ENST00000555185 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
PRKCH-213ENST00000555185 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
PRKCH-213ENST00000555185 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
PRKCH-213ENST00000555185 ROBO2Q9HCK4 1378 aa13.6□□□□□ -0.23
PRKCH-213ENST00000555185 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
PRKCH-213ENST00000555185 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
PRKCH-213ENST00000555185 PXDNQ92626 1479 aa13.58□□□□□ -0.24
PRKCH-213ENST00000555185 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 FOXO3O43524 673 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 ESCO1Q5FWF5 840 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 SLIT2O94813 1529 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
PRKCH-213ENST00000555185 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
PRKCH-213ENST00000555185 APLP2Q06481 763 aa13.55□□□□□ -0.24
PRKCH-213ENST00000555185 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
PRKCH-213ENST00000555185 NUP155O75694 1391 aa13.55□□□□□ -0.24
PRKCH-213ENST00000555185 R3HDM1Q15032 1099 aaKnown RBP13.54□□□□□ -0.24
PRKCH-213ENST00000555185 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
PRKCH-213ENST00000555185 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
PRKCH-213ENST00000555185 YY1P25490 414 aa13.53□□□□□ -0.24
PRKCH-213ENST00000555185 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-213ENST00000555185 KRT27Q7Z3Y8 459 aa13.53□□□□□ -0.24
PRKCH-213ENST00000555185 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
PRKCH-213ENST00000555185 BAG6P46379 1132 aa13.52□□□□□ -0.25
PRKCH-213ENST00000555185 PLCH1Q4KWH8 1693 aa13.51□□□□□ -0.25
PRKCH-213ENST00000555185 A0A0G2JS52 829 aa13.51□□□□□ -0.25
PRKCH-213ENST00000555185 MYT1Q01538 1121 aa13.51□□□□□ -0.25
PRKCH-213ENST00000555185 FAM182BQ5T319 152 aa13.51□□□□□ -0.25
PRKCH-213ENST00000555185 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
PRKCH-213ENST00000555185 VPS72Q15906 364 aa13.49□□□□□ -0.25
PRKCH-213ENST00000555185 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
PRKCH-213ENST00000555185 KIF1BO60333 1816 aa13.48□□□□□ -0.25
PRKCH-213ENST00000555185 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
PRKCH-213ENST00000555185 SPATA31A3Q5VYP0 1347 aa13.47□□□□□ -0.25
PRKCH-213ENST00000555185 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-213ENST00000555185 RGPD1P0DJD0 1748 aa13.47□□□□□ -0.25
PRKCH-213ENST00000555185 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-213ENST00000555185 FAM98CQ17RN3 349 aaKnown RBP13.46□□□□□ -0.25
PRKCH-213ENST00000555185 NAIPQ13075 1403 aa13.46□□□□□ -0.26
PRKCH-213ENST00000555185 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
PRKCH-213ENST00000555185 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
PRKCH-213ENST00000555185 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
PRKCH-213ENST00000555185 ITGAEP38570 1179 aa13.45□□□□□ -0.26
PRKCH-213ENST00000555185 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
PRKCH-213ENST00000555185 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
PRKCH-213ENST00000555185 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
PRKCH-213ENST00000555185 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-213ENST00000555185 PRAG1Q86YV5 1406 aa13.44□□□□□ -0.26
PRKCH-213ENST00000555185 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
PRKCH-213ENST00000555185 STK26Q9P289 416 aa13.43□□□□□ -0.26
PRKCH-213ENST00000555185 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
PRKCH-213ENST00000555185 NRAPQ86VF7 1730 aa13.42□□□□□ -0.26
PRKCH-213ENST00000555185 LMOD2Q6P5Q4 547 aa13.42□□□□□ -0.26
PRKCH-213ENST00000555185 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
PRKCH-213ENST00000555185 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
PRKCH-213ENST00000555185 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
PRKCH-213ENST00000555185 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
PRKCH-213ENST00000555185 PPLO60437 1756 aa13.4□□□□□ -0.26
PRKCH-213ENST00000555185 CCDC144AA2RUR9 1427 aa13.4□□□□□ -0.26
PRKCH-213ENST00000555185 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
PRKCH-213ENST00000555185 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-213ENST00000555185 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
PRKCH-213ENST00000555185 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
PRKCH-213ENST00000555185 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
PRKCH-213ENST00000555185 TRIM37O94972 964 aa13.37□□□□□ -0.27
PRKCH-213ENST00000555185 CAMKK2Q96RR4 588 aa13.37□□□□□ -0.27
PRKCH-213ENST00000555185 UTRNP46939 3433 aa13.36□□□□□ -0.27
PRKCH-213ENST00000555185 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
PRKCH-213ENST00000555185 THSD7AQ9UPZ6 1657 aa13.35□□□□□ -0.27
PRKCH-213ENST00000555185 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
PRKCH-213ENST00000555185 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
PRKCH-213ENST00000555185 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
PRKCH-213ENST00000555185 APBA3O96018 575 aa13.34□□□□□ -0.27
PRKCH-213ENST00000555185 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
PRKCH-213ENST00000555185 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
PRKCH-213ENST00000555185 RREB1Q92766 1687 aa13.34□□□□□ -0.27
PRKCH-213ENST00000555185 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
PRKCH-213ENST00000555185 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
PRKCH-213ENST00000555185 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
PRKCH-213ENST00000555185 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
PRKCH-213ENST00000555185 PSME1Q06323 249 aa13.32□□□□□ -0.28
PRKCH-213ENST00000555185 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
PRKCH-213ENST00000555185 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
PRKCH-213ENST00000555185 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
PRKCH-213ENST00000555185 TECPR2O15040 1411 aa13.31□□□□□ -0.28
PRKCH-213ENST00000555185 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
PRKCH-213ENST00000555185 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
PRKCH-213ENST00000555185 ARHGEF10O15013 1369 aa13.31□□□□□ -0.28
PRKCH-213ENST00000555185 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
PRKCH-213ENST00000555185 ZNF784Q8NCA9 323 aaPredicted RBP13.3□□□□□ -0.28
PRKCH-213ENST00000555185 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
PRKCH-213ENST00000555185 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRKCH-213ENST00000555185 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
PRKCH-213ENST00000555185 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
PRKCH-213ENST00000555185 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-213ENST00000555185 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
PRKCH-213ENST00000555185 KCNQ2O43526 872 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms