RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 MYT1Q01538 1121 aa28.06■■■□□ 2.08
ARHGEF40-204ENST00000555038 GOLGA2Q08379 1002 aa28.06■■■□□ 2.08
ARHGEF40-204ENST00000555038 CLTCQ00610 1675 aaKnown RBP28.05■■■□□ 2.08
ARHGEF40-204ENST00000555038 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
ARHGEF40-204ENST00000555038 PTPRMP28827 1452 aa28.05■■■□□ 2.08
ARHGEF40-204ENST00000555038 MORC1Q86VD1 984 aa28.04■■■□□ 2.08
ARHGEF40-204ENST00000555038 FANCIQ9NVI1 1328 aa28.04■■■□□ 2.08
ARHGEF40-204ENST00000555038 YTHDC2Q9H6S0 1430 aaKnown RBP28.02■■■□□ 2.08
ARHGEF40-204ENST00000555038 ALKQ9UM73 1620 aa28.02■■■□□ 2.08
ARHGEF40-204ENST00000555038 DUSP27Q5VZP5 1158 aa28.01■■■□□ 2.08
ARHGEF40-204ENST00000555038 FBXO31Q5XUX0 539 aaPredicted RBP28.01■■■□□ 2.07
ARHGEF40-204ENST00000555038 ATAD2Q6PL18 1390 aa28■■■□□ 2.07
ARHGEF40-204ENST00000555038 TRHP20396 242 aaPredicted RBP27.99■■■□□ 2.07
ARHGEF40-204ENST00000555038 SHPRHQ149N8 1683 aa27.98■■■□□ 2.07
ARHGEF40-204ENST00000555038 A2ML1A8K2U0 1454 aa27.98■■■□□ 2.07
ARHGEF40-204ENST00000555038 TRMT2AQ8IZ69 625 aaKnown RBP27.98■■■□□ 2.07
ARHGEF40-204ENST00000555038 EXOC6Q8TAG9 804 aa27.98■■■□□ 2.07
ARHGEF40-204ENST00000555038 SLFN5Q08AF3 891 aa27.97■■■□□ 2.07
ARHGEF40-204ENST00000555038 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
ARHGEF40-204ENST00000555038 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
ARHGEF40-204ENST00000555038 APAF1O14727 1248 aa27.94■■■□□ 2.06
ARHGEF40-204ENST00000555038 ABCC11Q96J66 1382 aa27.93■■■□□ 2.06
ARHGEF40-204ENST00000555038 CFAP53Q96M91 514 aa27.93■■■□□ 2.06
ARHGEF40-204ENST00000555038 CCDC146Q8IYE0 955 aa27.92■■■□□ 2.06
ARHGEF40-204ENST00000555038 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
ARHGEF40-204ENST00000555038 E9PSI1 815 aa27.91■■■□□ 2.06
ARHGEF40-204ENST00000555038 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.91■■■□□ 2.06
ARHGEF40-204ENST00000555038 MED14O60244 1454 aa27.91■■■□□ 2.06
ARHGEF40-204ENST00000555038 NCBP3Q53F19 620 aaKnown RBP27.91■■■□□ 2.06
ARHGEF40-204ENST00000555038 STK26Q9P289 416 aa27.91■■■□□ 2.06
ARHGEF40-204ENST00000555038 RIMS2Q9UQ26 1411 aa27.9■■■□□ 2.06
ARHGEF40-204ENST00000555038 NKTRP30414 1462 aaKnown RBP27.9■■■□□ 2.06
ARHGEF40-204ENST00000555038 PRAM1Q96QH2 718 aa27.89■■■□□ 2.06
ARHGEF40-204ENST00000555038 POGKQ9P215 609 aa27.89■■■□□ 2.06
ARHGEF40-204ENST00000555038 A0A1W2PP64 1363 aa27.88■■■□□ 2.05
ARHGEF40-204ENST00000555038 SETD1AO15047 1707 aaKnown RBP27.88■■■□□ 2.05
ARHGEF40-204ENST00000555038 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
ARHGEF40-204ENST00000555038 TERF2IPQ9NYB0 399 aa27.88■■■□□ 2.05
ARHGEF40-204ENST00000555038 ANKRD26Q9UPS8 1709 aa27.87■■■□□ 2.05
ARHGEF40-204ENST00000555038 RUNDC1Q96C34 613 aa27.86■■■□□ 2.05
ARHGEF40-204ENST00000555038 IQSEC2Q5JU85 1478 aa27.85■■■□□ 2.05
ARHGEF40-204ENST00000555038 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.85■■■□□ 2.05
ARHGEF40-204ENST00000555038 MTHFSP49914 203 aa27.83■■■□□ 2.05
ARHGEF40-204ENST00000555038 SAFB2Q14151 953 aaKnown RBP eCLIP27.83■■■□□ 2.05
ARHGEF40-204ENST00000555038 PLIN1O60240 522 aa27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 CRBNQ96SW2 442 aa27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 CD163L1Q9NR16 1453 aa27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 ZMYM3Q14202 1370 aa27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 MINK1Q8N4C8 1332 aaPredicted RBP27.81■■■□□ 2.04
ARHGEF40-204ENST00000555038 TNNT2P45379 298 aaPredicted RBP27.79■■■□□ 2.04
ARHGEF40-204ENST00000555038 CCDC27Q2M243 656 aa27.79■■■□□ 2.04
ARHGEF40-204ENST00000555038 TCERG1O14776 1098 aaKnown RBP27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 HDGFL2Q7Z4V5 671 aaPredicted RBP27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 WWC1Q8IX03 1113 aa27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 ANP32EQ9BTT0 268 aa27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 HDGFP51858 240 aaKnown RBP27.78■■■□□ 2.04
ARHGEF40-204ENST00000555038 NRXN3Q9Y4C0 1643 aa27.77■■■□□ 2.04
ARHGEF40-204ENST00000555038 ATP7BP35670 1465 aa27.77■■■□□ 2.04
ARHGEF40-204ENST00000555038 NLRP1Q9C000 1473 aa27.77■■■□□ 2.04
ARHGEF40-204ENST00000555038 MLECQ14165 292 aa27.76■■■□□ 2.03
ARHGEF40-204ENST00000555038 CDK19Q9BWU1 502 aa27.76■■■□□ 2.03
ARHGEF40-204ENST00000555038 WDR63Q8IWG1 891 aa27.75■■■□□ 2.03
ARHGEF40-204ENST00000555038 SPINK5Q9NQ38 1064 aaPredicted RBP27.75■■■□□ 2.03
ARHGEF40-204ENST00000555038 KNDC1Q76NI1 1749 aa27.75■■■□□ 2.03
ARHGEF40-204ENST00000555038 ADGRB2O60241 1585 aa27.74■■■□□ 2.03
ARHGEF40-204ENST00000555038 SIRT1Q96EB6 747 aa27.73■■■□□ 2.03
ARHGEF40-204ENST00000555038 MS4A1P11836 297 aa27.73■■■□□ 2.03
ARHGEF40-204ENST00000555038 KIF20BQ96Q89 1820 aa27.72■■■□□ 2.03
ARHGEF40-204ENST00000555038 TCP11L2Q8N4U5 519 aa27.72■■■□□ 2.03
ARHGEF40-204ENST00000555038 TNRQ92752 1358 aa27.72■■■□□ 2.03
ARHGEF40-204ENST00000555038 COL3A1P02461 1466 aaPredicted RBP27.71■■■□□ 2.03
ARHGEF40-204ENST00000555038 TECPR2O15040 1411 aa27.71■■■□□ 2.03
ARHGEF40-204ENST00000555038 FYB1O15117 783 aa27.71■■■□□ 2.03
ARHGEF40-204ENST00000555038 FAM135BQ49AJ0 1406 aa27.7■■■□□ 2.02
ARHGEF40-204ENST00000555038 C20orf194Q5TEA3 1177 aa27.69■■■□□ 2.02
ARHGEF40-204ENST00000555038 GGNBP2Q9H3C7 697 aa27.66■■■□□ 2.02
ARHGEF40-204ENST00000555038 DMRT2Q9Y5R5 561 aa27.66■■■□□ 2.02
ARHGEF40-204ENST00000555038 CPS1P31327 1500 aa27.66■■■□□ 2.02
ARHGEF40-204ENST00000555038 MSH5O43196 834 aa27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 U2AF1L5P0DN76 240 aaPredicted RBP27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 U2AF1Q01081 240 aaKnown RBP eCLIP27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 SENP3Q9H4L4 574 aaPredicted RBP27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 CABP1Q9NZU7 370 aa27.65■■■□□ 2.02
ARHGEF40-204ENST00000555038 PNPLA6Q8IY17 1366 aa27.64■■■□□ 2.02
ARHGEF40-204ENST00000555038 KDM2BQ8NHM5 1336 aa27.64■■■□□ 2.02
ARHGEF40-204ENST00000555038 PDE3AQ14432 1141 aa27.64■■■□□ 2.02
ARHGEF40-204ENST00000555038 TMEM2Q9UHN6 1383 aa27.62■■■□□ 2.01
ARHGEF40-204ENST00000555038 METP08581 1390 aa27.62■■■□□ 2.01
ARHGEF40-204ENST00000555038 WAPLQ7Z5K2 1190 aa27.61■■■□□ 2.01
ARHGEF40-204ENST00000555038 PNNQ9H307 717 aaKnown RBP27.61■■■□□ 2.01
ARHGEF40-204ENST00000555038 CDC42BPGQ6DT37 1551 aa27.61■■■□□ 2.01
ARHGEF40-204ENST00000555038 WASLO00401 505 aaPredicted RBP27.6■■■□□ 2.01
ARHGEF40-204ENST00000555038 MYH16Q9H6N6 1097 aa27.6■■■□□ 2.01
ARHGEF40-204ENST00000555038 CPSF1Q10570 1443 aaKnown RBP27.59■■■□□ 2.01
ARHGEF40-204ENST00000555038 EDC4Q6P2E9 1401 aaKnown RBP27.58■■■□□ 2.01
ARHGEF40-204ENST00000555038 BCAR3O75815 825 aa27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms