RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RALBP1Q15311 655 aa4.87□□□□□ -1.63
SEC23A-207ENST00000554615 UBR2Q8IWV8 1755 aa4.87□□□□□ -1.63
SEC23A-207ENST00000554615 PLEKHG2Q9H7P9 1386 aa4.87□□□□□ -1.63
SEC23A-207ENST00000554615 XIRP1Q702N8 1843 aaKnown RBP4.86□□□□□ -1.63
SEC23A-207ENST00000554615 RNF39Q9H2S5 420 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 CPSF1Q10570 1443 aaKnown RBP4.86□□□□□ -1.63
SEC23A-207ENST00000554615 SSH2Q76I76 1423 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 SHANK3Q9BYB0 1731 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 COL18A1P39060 1754 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 MYBBP1AQ9BQG0 1328 aaKnown RBP4.86□□□□□ -1.63
SEC23A-207ENST00000554615 LAMB4A4D0S4 1761 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
SEC23A-207ENST00000554615 NGEFQ8N5V2 710 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 RREB1Q92766 1687 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 C1QBPQ07021 282 aaKnown RBP4.85□□□□□ -1.63
SEC23A-207ENST00000554615 PDE3BQ13370 1112 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 KCNH8Q96L42 1107 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 A2ML1A8K2U0 1454 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 ZNF831Q5JPB2 1677 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 EIF3AQ14152 1382 aaKnown RBP4.85□□□□□ -1.63
SEC23A-207ENST00000554615 RIMS2Q9UQ26 1411 aa4.85□□□□□ -1.63
SEC23A-207ENST00000554615 PLCH1Q4KWH8 1693 aa4.84□□□□□ -1.63
SEC23A-207ENST00000554615 PIK3R4Q99570 1358 aa4.84□□□□□ -1.63
SEC23A-207ENST00000554615 LTN1O94822 1766 aa4.84□□□□□ -1.63
SEC23A-207ENST00000554615 C5P01031 1676 aa4.84□□□□□ -1.63
SEC23A-207ENST00000554615 YTHDC2Q9H6S0 1430 aaKnown RBP4.84□□□□□ -1.63
SEC23A-207ENST00000554615 RGPD8O14715 1765 aaPredicted RBP4.84□□□□□ -1.63
SEC23A-207ENST00000554615 KIF1AQ12756 1690 aa4.84□□□□□ -1.63
SEC23A-207ENST00000554615 CFDP1Q9UEE9 299 aaPredicted RBP4.84□□□□□ -1.64
SEC23A-207ENST00000554615 AMER1Q5JTC6 1135 aaPredicted RBP4.83□□□□□ -1.64
SEC23A-207ENST00000554615 ABCC11Q96J66 1382 aa4.83□□□□□ -1.64
SEC23A-207ENST00000554615 SIRT1Q96EB6 747 aa4.83□□□□□ -1.64
SEC23A-207ENST00000554615 MYH15Q9Y2K3 1946 aa4.83□□□□□ -1.64
SEC23A-207ENST00000554615 CASZ1Q86V15 1759 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 NUP188Q5SRE5 1749 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 SLC24A1O60721 1099 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 PTCH1Q13635 1447 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 FAM50AQ14320 339 aaKnown RBP4.82□□□□□ -1.64
SEC23A-207ENST00000554615 CCDC184Q52MB2 194 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 SLIT3O75094 1523 aa4.82□□□□□ -1.64
SEC23A-207ENST00000554615 CCDC27Q2M243 656 aa4.81□□□□□ -1.64
SEC23A-207ENST00000554615 NCOA3Q9Y6Q9 1424 aa4.81□□□□□ -1.64
SEC23A-207ENST00000554615 PLEKHD1A6NEE1 506 aa4.81□□□□□ -1.64
SEC23A-207ENST00000554615 NHSL1Q5SYE7 1610 aa4.81□□□□□ -1.64
SEC23A-207ENST00000554615 SCN11AQ9UI33 1791 aa4.81□□□□□ -1.64
SEC23A-207ENST00000554615 BRPF1P55201 1214 aaPredicted RBP4.81□□□□□ -1.64
SEC23A-207ENST00000554615 NUDCQ9Y266 331 aa4.8□□□□□ -1.64
SEC23A-207ENST00000554615 A0A1B0GUL6 1792 aa4.8□□□□□ -1.64
SEC23A-207ENST00000554615 PKD2Q13563 968 aa4.8□□□□□ -1.64
SEC23A-207ENST00000554615 CHMP7Q8WUX9 453 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-207ENST00000554615 NKTRP30414 1462 aaKnown RBP4.79□□□□□ -1.64
SEC23A-207ENST00000554615 KIAA1551Q9HCM1 1747 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 AATKQ6ZMQ8 1374 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 ANKRD36BQ8N2N9 1353 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 NFAT5O94916 1531 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 P3H3Q8IVL6 736 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 STRCP1A6NGW2 1772 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 ANP32CO43423 234 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 RRP7BPQ9NSQ0 103 aa4.79□□□□□ -1.64
SEC23A-207ENST00000554615 ARAP2Q8WZ64 1704 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.78□□□□□ -1.64
SEC23A-207ENST00000554615 LAMB2P55268 1798 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 MRC1P22897 1456 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 AAMPQ13685 434 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 C14orf93Q9H972 538 aaKnown RBP4.78□□□□□ -1.64
SEC23A-207ENST00000554615 PPP4R2Q9NY27 417 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 PLEKHH1Q9ULM0 1364 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 KIF24Q5T7B8 1368 aa4.78□□□□□ -1.64
SEC23A-207ENST00000554615 PTPRUQ92729 1446 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 MS4A1P11836 297 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 IL17RAQ96F46 866 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 OVOS2A0A0J9YW53 1432 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 OVOS2Q6IE36 1432 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 EFCAB2Q5VUJ9 269 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 OVOS2A0A0G2JMS6 1433 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 PXDNLA1KZ92 1463 aa4.77□□□□□ -1.65
SEC23A-207ENST00000554615 SLC4A1APQ9BWU0 796 aaKnown RBP4.76□□□□□ -1.65
SEC23A-207ENST00000554615 TJP1Q07157 1748 aa4.76□□□□□ -1.65
SEC23A-207ENST00000554615 DDX10Q13206 875 aaKnown RBP4.76□□□□□ -1.65
SEC23A-207ENST00000554615 ADAMTS13Q76LX8 1427 aa4.76□□□□□ -1.65
SEC23A-207ENST00000554615 NLRP13Q86W25 1043 aa4.76□□□□□ -1.65
SEC23A-207ENST00000554615 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
SEC23A-207ENST00000554615 RGPD2P0DJD1 1756 aa4.76□□□□□ -1.65
SEC23A-207ENST00000554615 PHLPP1O60346 1717 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 AK9Q5TCS8 1911 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 IL16Q14005 1332 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
SEC23A-207ENST00000554615 RGS12O14924 1447 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 RTL1A6NKG5 1358 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 ANKARQ7Z5J8 1434 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 ANKRD36CQ5JPF3 1778 aa4.74□□□□□ -1.65
SEC23A-207ENST00000554615 TTBK1Q5TCY1 1321 aaPredicted RBP4.73□□□□□ -1.65
SEC23A-207ENST00000554615 DUSP27Q5VZP5 1158 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 ANP32EQ9BTT0 268 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 ROBO1Q9Y6N7 1651 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 TMEM94Q12767 1356 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 LRP6O75581 1613 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 LAMA4Q16363 1823 aa4.73□□□□□ -1.65
SEC23A-207ENST00000554615 PLEKHF1Q96S99 279 aa4.72□□□□□ -1.65
SEC23A-207ENST00000554615 MYT1LQ9UL68 1186 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms