RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-212ENST00000554158 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-212ENST00000554158 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
ACTN1-212ENST00000554158 PPLO60437 1756 aa12.28□□□□□ -0.44
ACTN1-212ENST00000554158 LAMC1P11047 1609 aa12.28□□□□□ -0.44
ACTN1-212ENST00000554158 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
ACTN1-212ENST00000554158 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
ACTN1-212ENST00000554158 ORAI2Q96SN7 254 aa12.25□□□□□ -0.45
ACTN1-212ENST00000554158 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
ACTN1-212ENST00000554158 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
ACTN1-212ENST00000554158 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-212ENST00000554158 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
ACTN1-212ENST00000554158 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-212ENST00000554158 ESCO1Q5FWF5 840 aa12.24□□□□□ -0.45
ACTN1-212ENST00000554158 ROBO2Q9HCK4 1378 aa12.23□□□□□ -0.45
ACTN1-212ENST00000554158 CDC42BPGQ6DT37 1551 aa12.22□□□□□ -0.45
ACTN1-212ENST00000554158 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-212ENST00000554158 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
ACTN1-212ENST00000554158 NAIPQ13075 1403 aa12.2□□□□□ -0.46
ACTN1-212ENST00000554158 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-212ENST00000554158 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
ACTN1-212ENST00000554158 ATRNO75882 1429 aa12.2□□□□□ -0.46
ACTN1-212ENST00000554158 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
ACTN1-212ENST00000554158 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
ACTN1-212ENST00000554158 STK26Q9P289 416 aa12.19□□□□□ -0.46
ACTN1-212ENST00000554158 PRAG1Q86YV5 1406 aa12.19□□□□□ -0.46
ACTN1-212ENST00000554158 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
ACTN1-212ENST00000554158 FOXO3O43524 673 aa12.18□□□□□ -0.46
ACTN1-212ENST00000554158 XPCQ01831 940 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-212ENST00000554158 CCDC144AA2RUR9 1427 aa12.18□□□□□ -0.46
ACTN1-212ENST00000554158 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
ACTN1-212ENST00000554158 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-212ENST00000554158 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
ACTN1-212ENST00000554158 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
ACTN1-212ENST00000554158 FMN2Q9NZ56 1722 aa12.17□□□□□ -0.46
ACTN1-212ENST00000554158 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
ACTN1-212ENST00000554158 MYOM2P54296 1465 aa12.16□□□□□ -0.46
ACTN1-212ENST00000554158 MAPK8IP2Q13387 824 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-212ENST00000554158 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
ACTN1-212ENST00000554158 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-212ENST00000554158 PXDNQ92626 1479 aa12.15□□□□□ -0.46
ACTN1-212ENST00000554158 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
ACTN1-212ENST00000554158 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
ACTN1-212ENST00000554158 PSME1Q06323 249 aa12.14□□□□□ -0.47
ACTN1-212ENST00000554158 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
ACTN1-212ENST00000554158 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
ACTN1-212ENST00000554158 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
ACTN1-212ENST00000554158 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
ACTN1-212ENST00000554158 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
ACTN1-212ENST00000554158 NWD2Q9ULI1 1742 aa12.12□□□□□ -0.47
ACTN1-212ENST00000554158 A0A0G2JS52 829 aa12.12□□□□□ -0.47
ACTN1-212ENST00000554158 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
ACTN1-212ENST00000554158 MYT1Q01538 1121 aa12.12□□□□□ -0.47
ACTN1-212ENST00000554158 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
ACTN1-212ENST00000554158 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
ACTN1-212ENST00000554158 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-212ENST00000554158 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
ACTN1-212ENST00000554158 EP400Q96L91 3159 aa12.11□□□□□ -0.47
ACTN1-212ENST00000554158 TECPR2O15040 1411 aa12.11□□□□□ -0.47
ACTN1-212ENST00000554158 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
ACTN1-212ENST00000554158 RALGAPBQ86X10 1494 aa12.1□□□□□ -0.47
ACTN1-212ENST00000554158 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
ACTN1-212ENST00000554158 TMEM132EQ6IEE7 984 aa12.1□□□□□ -0.47
ACTN1-212ENST00000554158 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
ACTN1-212ENST00000554158 GLI3P10071 1580 aa12.09□□□□□ -0.47
ACTN1-212ENST00000554158 PHF8Q9UPP1 1060 aa12.09□□□□□ -0.47
ACTN1-212ENST00000554158 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
ACTN1-212ENST00000554158 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
ACTN1-212ENST00000554158 SLIT2O94813 1529 aa12.08□□□□□ -0.48
ACTN1-212ENST00000554158 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
ACTN1-212ENST00000554158 ABCA3Q99758 1704 aa12.08□□□□□ -0.48
ACTN1-212ENST00000554158 ACIN1Q9UKV3 1341 aaKnown RBP12.08□□□□□ -0.48
ACTN1-212ENST00000554158 PIK3C2GO75747 1445 aa12.07□□□□□ -0.48
ACTN1-212ENST00000554158 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
ACTN1-212ENST00000554158 MPHOSPH9Q99550 1183 aa12.07□□□□□ -0.48
ACTN1-212ENST00000554158 POGKQ9P215 609 aa12.07□□□□□ -0.48
ACTN1-212ENST00000554158 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
ACTN1-212ENST00000554158 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
ACTN1-212ENST00000554158 VPS72Q15906 364 aa12.06□□□□□ -0.48
ACTN1-212ENST00000554158 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
ACTN1-212ENST00000554158 SPATA31E1Q6ZUB1 1445 aa12.05□□□□□ -0.48
ACTN1-212ENST00000554158 BAG6P46379 1132 aa12.05□□□□□ -0.48
ACTN1-212ENST00000554158 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
ACTN1-212ENST00000554158 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
ACTN1-212ENST00000554158 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
ACTN1-212ENST00000554158 RGPD1P0DJD0 1748 aa12.04□□□□□ -0.48
ACTN1-212ENST00000554158 HOXD11P31277 338 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-212ENST00000554158 DEFB132Q7Z7B7 95 aa12.04□□□□□ -0.48
ACTN1-212ENST00000554158 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
ACTN1-212ENST00000554158 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
ACTN1-212ENST00000554158 NRXN1Q9ULB1 1477 aa12.03□□□□□ -0.48
ACTN1-212ENST00000554158 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
ACTN1-212ENST00000554158 LRP5O75197 1615 aa12.03□□□□□ -0.48
ACTN1-212ENST00000554158 SRCAPQ6ZRS2 3230 aa12.03□□□□□ -0.48
ACTN1-212ENST00000554158 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.48
ACTN1-212ENST00000554158 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
ACTN1-212ENST00000554158 C14orf93Q9H972 538 aaKnown RBP12.02□□□□□ -0.49
ACTN1-212ENST00000554158 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
ACTN1-212ENST00000554158 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
ACTN1-212ENST00000554158 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms