RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 RIMBP3Q9UFD9 1639 aa11.85□□□□□ -0.51
AL049839.2-201ENST00000553947 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
AL049839.2-201ENST00000553947 NEXMIFQ5QGS0 1516 aa11.85□□□□□ -0.51
AL049839.2-201ENST00000553947 GSE1Q14687 1217 aa11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 ARHGAP31Q2M1Z3 1444 aa11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 ZC3H13Q5T200 1668 aaKnown RBP11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
AL049839.2-201ENST00000553947 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
AL049839.2-201ENST00000553947 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
AL049839.2-201ENST00000553947 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
AL049839.2-201ENST00000553947 DIP2BQ9P265 1576 aa11.82□□□□□ -0.52
AL049839.2-201ENST00000553947 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
AL049839.2-201ENST00000553947 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
AL049839.2-201ENST00000553947 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
AL049839.2-201ENST00000553947 TSPOAP1O95153 1857 aa11.81□□□□□ -0.52
AL049839.2-201ENST00000553947 MYO5BQ9ULV0 1848 aa11.8□□□□□ -0.52
AL049839.2-201ENST00000553947 PLIN1O60240 522 aa11.8□□□□□ -0.52
AL049839.2-201ENST00000553947 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
AL049839.2-201ENST00000553947 NSD3Q9BZ95 1437 aa11.8□□□□□ -0.52
AL049839.2-201ENST00000553947 SLC52A1Q9NWF4 448 aa11.79□□□□□ -0.52
AL049839.2-201ENST00000553947 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
AL049839.2-201ENST00000553947 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
AL049839.2-201ENST00000553947 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
AL049839.2-201ENST00000553947 TMEM131LA2VDJ0 1609 aa11.78□□□□□ -0.52
AL049839.2-201ENST00000553947 TULP4Q9NRJ4 1543 aa11.78□□□□□ -0.52
AL049839.2-201ENST00000553947 TNNT2P45379 298 aaPredicted RBP11.78□□□□□ -0.52
AL049839.2-201ENST00000553947 STK26Q9P289 416 aa11.78□□□□□ -0.52
AL049839.2-201ENST00000553947 DUSP27Q5VZP5 1158 aa11.77□□□□□ -0.53
AL049839.2-201ENST00000553947 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
AL049839.2-201ENST00000553947 APAF1O14727 1248 aa11.76□□□□□ -0.53
AL049839.2-201ENST00000553947 FRAT1Q92837 279 aaPredicted RBP11.76□□□□□ -0.53
AL049839.2-201ENST00000553947 ZFYVE9O95405 1425 aa11.76□□□□□ -0.53
AL049839.2-201ENST00000553947 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
AL049839.2-201ENST00000553947 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
AL049839.2-201ENST00000553947 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
AL049839.2-201ENST00000553947 EVC2Q86UK5 1308 aa11.75□□□□□ -0.53
AL049839.2-201ENST00000553947 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
AL049839.2-201ENST00000553947 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
AL049839.2-201ENST00000553947 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
AL049839.2-201ENST00000553947 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
AL049839.2-201ENST00000553947 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
AL049839.2-201ENST00000553947 SLFN5Q08AF3 891 aa11.73□□□□□ -0.53
AL049839.2-201ENST00000553947 MLECQ14165 292 aa11.73□□□□□ -0.53
AL049839.2-201ENST00000553947 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
AL049839.2-201ENST00000553947 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
AL049839.2-201ENST00000553947 PTPRMP28827 1452 aa11.72□□□□□ -0.53
AL049839.2-201ENST00000553947 HSP90AA2PQ14568 343 aaPredicted RBP11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 CGNL1Q0VF96 1302 aa11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 MINK1Q8N4C8 1332 aaPredicted RBP11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 NFKBIBQ15653 356 aa11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 PRAM1Q96QH2 718 aa11.71□□□□□ -0.53
AL049839.2-201ENST00000553947 USP32Q8NFA0 1604 aa11.71□□□□□ -0.54
AL049839.2-201ENST00000553947 REREQ9P2R6 1566 aa11.71□□□□□ -0.54
AL049839.2-201ENST00000553947 MTHFSP49914 203 aa11.71□□□□□ -0.54
AL049839.2-201ENST00000553947 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 AGLP35573 1532 aa11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 NAP1L5Q96NT1 182 aaPredicted RBP11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
AL049839.2-201ENST00000553947 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
AL049839.2-201ENST00000553947 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
AL049839.2-201ENST00000553947 A0A0U1RQG5 324 aaPredicted RBP11.68□□□□□ -0.54
AL049839.2-201ENST00000553947 PDE4AP27815 886 aa11.68□□□□□ -0.54
AL049839.2-201ENST00000553947 POGKQ9P215 609 aa11.68□□□□□ -0.54
AL049839.2-201ENST00000553947 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
AL049839.2-201ENST00000553947 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
AL049839.2-201ENST00000553947 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
AL049839.2-201ENST00000553947 WWC1Q8IX03 1113 aa11.67□□□□□ -0.54
AL049839.2-201ENST00000553947 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
AL049839.2-201ENST00000553947 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
AL049839.2-201ENST00000553947 KIF13AQ9H1H9 1805 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 BCAR3O75815 825 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
AL049839.2-201ENST00000553947 ABCC11Q96J66 1382 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 E9PSI1 815 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 TCP11L2Q8N4U5 519 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 RUNDC1Q96C34 613 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 CDK19Q9BWU1 502 aa11.65□□□□□ -0.54
AL049839.2-201ENST00000553947 NSD2O96028 1365 aa11.65□□□□□ -0.55
AL049839.2-201ENST00000553947 RIMS2Q9UQ26 1411 aa11.65□□□□□ -0.55
AL049839.2-201ENST00000553947 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
AL049839.2-201ENST00000553947 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
AL049839.2-201ENST00000553947 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
AL049839.2-201ENST00000553947 FYB1O15117 783 aa11.63□□□□□ -0.55
AL049839.2-201ENST00000553947 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
AL049839.2-201ENST00000553947 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
AL049839.2-201ENST00000553947 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms