RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
ABCD4-219ENST00000553745 POGKQ9P215 609 aa19.44■□□□□ 0.7
ABCD4-219ENST00000553745 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
ABCD4-219ENST00000553745 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
ABCD4-219ENST00000553745 PTCH1Q13635 1447 aa19.44■□□□□ 0.7
ABCD4-219ENST00000553745 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
ABCD4-219ENST00000553745 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
ABCD4-219ENST00000553745 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-219ENST00000553745 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
ABCD4-219ENST00000553745 AMOTL2Q9Y2J4 779 aa19.41■□□□□ 0.7
ABCD4-219ENST00000553745 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
ABCD4-219ENST00000553745 ANP32CO43423 234 aa19.4■□□□□ 0.7
ABCD4-219ENST00000553745 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
ABCD4-219ENST00000553745 ADGRB2O60241 1585 aa19.39■□□□□ 0.7
ABCD4-219ENST00000553745 SIRT1Q96EB6 747 aa19.39■□□□□ 0.69
ABCD4-219ENST00000553745 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
ABCD4-219ENST00000553745 KCNA6P17658 529 aa19.36■□□□□ 0.69
ABCD4-219ENST00000553745 STRCP1A6NGW2 1772 aa19.35■□□□□ 0.69
ABCD4-219ENST00000553745 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
ABCD4-219ENST00000553745 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
ABCD4-219ENST00000553745 SRPK2P78362 688 aaKnown RBP19.31■□□□□ 0.68
ABCD4-219ENST00000553745 PUS7Q96PZ0 661 aaKnown RBP19.29■□□□□ 0.68
ABCD4-219ENST00000553745 CDK19Q9BWU1 502 aa19.29■□□□□ 0.68
ABCD4-219ENST00000553745 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
ABCD4-219ENST00000553745 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
ABCD4-219ENST00000553745 PANK3Q9H999 370 aa19.28■□□□□ 0.68
ABCD4-219ENST00000553745 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.68
ABCD4-219ENST00000553745 WASLO00401 505 aaPredicted RBP19.27■□□□□ 0.68
ABCD4-219ENST00000553745 ATP7BP35670 1465 aa19.27■□□□□ 0.67
ABCD4-219ENST00000553745 USP32Q8NFA0 1604 aa19.26■□□□□ 0.67
ABCD4-219ENST00000553745 FMN2Q9NZ56 1722 aa19.26■□□□□ 0.67
ABCD4-219ENST00000553745 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
ABCD4-219ENST00000553745 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
ABCD4-219ENST00000553745 RGPD8O14715 1765 aaPredicted RBP19.25■□□□□ 0.67
ABCD4-219ENST00000553745 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
ABCD4-219ENST00000553745 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
ABCD4-219ENST00000553745 ITSN1Q15811 1721 aa19.24■□□□□ 0.67
ABCD4-219ENST00000553745 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
ABCD4-219ENST00000553745 PER1O15534 1290 aaPredicted RBP19.23■□□□□ 0.67
ABCD4-219ENST00000553745 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
ABCD4-219ENST00000553745 CD163L1Q9NR16 1453 aa19.22■□□□□ 0.67
ABCD4-219ENST00000553745 PRR36Q9H6K5 1346 aa19.22■□□□□ 0.67
ABCD4-219ENST00000553745 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
ABCD4-219ENST00000553745 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
ABCD4-219ENST00000553745 PPIP5K1Q6PFW1 1433 aa19.2■□□□□ 0.66
ABCD4-219ENST00000553745 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
ABCD4-219ENST00000553745 A0A1W2PP64 1363 aa19.2■□□□□ 0.66
ABCD4-219ENST00000553745 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
ABCD4-219ENST00000553745 NSD3Q9BZ95 1437 aa19.19■□□□□ 0.66
ABCD4-219ENST00000553745 NUDT16Q96DE0 195 aaKnown RBP19.19■□□□□ 0.66
ABCD4-219ENST00000553745 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
ABCD4-219ENST00000553745 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
ABCD4-219ENST00000553745 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
ABCD4-219ENST00000553745 PROSER2Q86WR7 435 aaPredicted RBP19.17■□□□□ 0.66
ABCD4-219ENST00000553745 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
ABCD4-219ENST00000553745 ZNF335Q9H4Z2 1342 aaPredicted RBP19.17■□□□□ 0.66
ABCD4-219ENST00000553745 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
ABCD4-219ENST00000553745 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
ABCD4-219ENST00000553745 TMEM94Q12767 1356 aa19.16■□□□□ 0.66
ABCD4-219ENST00000553745 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
ABCD4-219ENST00000553745 CCDC61Q9Y6R9 512 aa19.15■□□□□ 0.66
ABCD4-219ENST00000553745 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
ABCD4-219ENST00000553745 C14orf37Q86TY3 774 aa19.14■□□□□ 0.66
ABCD4-219ENST00000553745 KIF20BQ96Q89 1820 aa19.14■□□□□ 0.65
ABCD4-219ENST00000553745 AMER1Q5JTC6 1135 aaPredicted RBP19.14■□□□□ 0.65
ABCD4-219ENST00000553745 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
ABCD4-219ENST00000553745 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
ABCD4-219ENST00000553745 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
ABCD4-219ENST00000553745 NRKQ7Z2Y5 1582 aa19.13■□□□□ 0.65
ABCD4-219ENST00000553745 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
ABCD4-219ENST00000553745 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
ABCD4-219ENST00000553745 LRRC7Q96NW7 1537 aa19.13■□□□□ 0.65
ABCD4-219ENST00000553745 CPSF1Q10570 1443 aaKnown RBP19.13■□□□□ 0.65
ABCD4-219ENST00000553745 NCOA3Q9Y6Q9 1424 aa19.12■□□□□ 0.65
ABCD4-219ENST00000553745 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
ABCD4-219ENST00000553745 NPC1L1Q9UHC9 1359 aa19.12■□□□□ 0.65
ABCD4-219ENST00000553745 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
ABCD4-219ENST00000553745 DCCP43146 1447 aa19.09■□□□□ 0.65
ABCD4-219ENST00000553745 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
ABCD4-219ENST00000553745 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
ABCD4-219ENST00000553745 RALBP1Q15311 655 aa19.07■□□□□ 0.64
ABCD4-219ENST00000553745 EDC4Q6P2E9 1401 aaKnown RBP19.07■□□□□ 0.64
ABCD4-219ENST00000553745 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
ABCD4-219ENST00000553745 C19orf44Q9H6X5 657 aa19.06■□□□□ 0.64
ABCD4-219ENST00000553745 ACEP12821 1306 aa19.06■□□□□ 0.64
ABCD4-219ENST00000553745 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
ABCD4-219ENST00000553745 POLR3AO14802 1390 aaPredicted RBP19.05■□□□□ 0.64
ABCD4-219ENST00000553745 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
ABCD4-219ENST00000553745 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
ABCD4-219ENST00000553745 USP6P35125 1406 aa19.04■□□□□ 0.64
ABCD4-219ENST00000553745 MST1RQ04912 1400 aa19.04■□□□□ 0.64
ABCD4-219ENST00000553745 NSD2O96028 1365 aa19.04■□□□□ 0.64
ABCD4-219ENST00000553745 MSH6P52701 1360 aa19.04■□□□□ 0.64
ABCD4-219ENST00000553745 KIF1AQ12756 1690 aa19.03■□□□□ 0.64
ABCD4-219ENST00000553745 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
ABCD4-219ENST00000553745 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
ABCD4-219ENST00000553745 LTBP4Q8N2S1 1624 aa19.03■□□□□ 0.64
ABCD4-219ENST00000553745 ATF3P18847 181 aa19.01■□□□□ 0.63
ABCD4-219ENST00000553745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.01■□□□□ 0.63
ABCD4-219ENST00000553745 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms