RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 RXRBP28702 533 aa14.82□□□□□ -0.04
ACTN1-208ENST00000553370 AFF2P51816 1311 aa14.82□□□□□ -0.04
ACTN1-208ENST00000553370 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
ACTN1-208ENST00000553370 C8orf37Q96NL8 207 aa14.81□□□□□ -0.04
ACTN1-208ENST00000553370 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
ACTN1-208ENST00000553370 IFT172Q9UG01 1749 aa14.8□□□□□ -0.04
ACTN1-208ENST00000553370 RPGRIP1LQ68CZ1 1315 aa14.8□□□□□ -0.04
ACTN1-208ENST00000553370 C1orf167Q5SNV9 1468 aa14.8□□□□□ -0.04
ACTN1-208ENST00000553370 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
ACTN1-208ENST00000553370 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
ACTN1-208ENST00000553370 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
ACTN1-208ENST00000553370 ADAMTS2O95450 1211 aa14.77□□□□□ -0.05
ACTN1-208ENST00000553370 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.05
ACTN1-208ENST00000553370 MARF1Q9Y4F3 1742 aaKnown RBP14.77□□□□□ -0.05
ACTN1-208ENST00000553370 LAMC1P11047 1609 aa14.77□□□□□ -0.05
ACTN1-208ENST00000553370 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
ACTN1-208ENST00000553370 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
ACTN1-208ENST00000553370 NGLY1Q96IV0 654 aa14.75□□□□□ -0.05
ACTN1-208ENST00000553370 CDK12Q9NYV4 1490 aaPredicted RBP14.75□□□□□ -0.05
ACTN1-208ENST00000553370 STK26Q9P289 416 aa14.74□□□□□ -0.05
ACTN1-208ENST00000553370 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
ACTN1-208ENST00000553370 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
ACTN1-208ENST00000553370 ORAI2Q96SN7 254 aa14.73□□□□□ -0.05
ACTN1-208ENST00000553370 ESCO1Q5FWF5 840 aa14.72□□□□□ -0.05
ACTN1-208ENST00000553370 QTRT2Q9H974 415 aaKnown RBP14.72□□□□□ -0.05
ACTN1-208ENST00000553370 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
ACTN1-208ENST00000553370 PRAG1Q86YV5 1406 aa14.72□□□□□ -0.05
ACTN1-208ENST00000553370 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
ACTN1-208ENST00000553370 KIF1AQ12756 1690 aa14.71□□□□□ -0.05
ACTN1-208ENST00000553370 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.05
ACTN1-208ENST00000553370 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
ACTN1-208ENST00000553370 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
ACTN1-208ENST00000553370 ANKRD30BQ9BXX2 1392 aa14.71□□□□□ -0.06
ACTN1-208ENST00000553370 NPHP3Q7Z494 1330 aa14.7□□□□□ -0.06
ACTN1-208ENST00000553370 RGS12O14924 1447 aa14.7□□□□□ -0.06
ACTN1-208ENST00000553370 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
ACTN1-208ENST00000553370 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
ACTN1-208ENST00000553370 SOS2Q07890 1332 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-208ENST00000553370 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
ACTN1-208ENST00000553370 MPHOSPH9Q99550 1183 aa14.68□□□□□ -0.06
ACTN1-208ENST00000553370 USP21Q9UK80 565 aa14.68□□□□□ -0.06
ACTN1-208ENST00000553370 XPCQ01831 940 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-208ENST00000553370 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
ACTN1-208ENST00000553370 TRPC5Q9UL62 973 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-208ENST00000553370 TECPR2O15040 1411 aa14.66□□□□□ -0.06
ACTN1-208ENST00000553370 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
ACTN1-208ENST00000553370 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
ACTN1-208ENST00000553370 PXDNQ92626 1479 aa14.65□□□□□ -0.06
ACTN1-208ENST00000553370 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
ACTN1-208ENST00000553370 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-208ENST00000553370 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
ACTN1-208ENST00000553370 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
ACTN1-208ENST00000553370 FOXO3O43524 673 aa14.64□□□□□ -0.07
ACTN1-208ENST00000553370 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
ACTN1-208ENST00000553370 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
ACTN1-208ENST00000553370 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-208ENST00000553370 MYOM2P54296 1465 aa14.63□□□□□ -0.07
ACTN1-208ENST00000553370 EP400Q96L91 3159 aa14.62□□□□□ -0.07
ACTN1-208ENST00000553370 ABCC11Q96J66 1382 aa14.61□□□□□ -0.07
ACTN1-208ENST00000553370 PLEKHH1Q9ULM0 1364 aa14.61□□□□□ -0.07
ACTN1-208ENST00000553370 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
ACTN1-208ENST00000553370 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
ACTN1-208ENST00000553370 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
ACTN1-208ENST00000553370 ATRNO75882 1429 aa14.6□□□□□ -0.07
ACTN1-208ENST00000553370 SAFB2Q14151 953 aaKnown RBP eCLIP14.6□□□□□ -0.07
ACTN1-208ENST00000553370 PLCH1Q4KWH8 1693 aa14.6□□□□□ -0.07
ACTN1-208ENST00000553370 ABCA3Q99758 1704 aa14.59□□□□□ -0.07
ACTN1-208ENST00000553370 LMOD2Q6P5Q4 547 aa14.59□□□□□ -0.07
ACTN1-208ENST00000553370 POGKQ9P215 609 aa14.59□□□□□ -0.07
ACTN1-208ENST00000553370 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
ACTN1-208ENST00000553370 PSME1Q06323 249 aa14.57□□□□□ -0.08
ACTN1-208ENST00000553370 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-208ENST00000553370 NWD2Q9ULI1 1742 aa14.57□□□□□ -0.08
ACTN1-208ENST00000553370 TNS3Q68CZ2 1445 aa14.57□□□□□ -0.08
ACTN1-208ENST00000553370 ITSN1Q15811 1721 aa14.56□□□□□ -0.08
ACTN1-208ENST00000553370 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
ACTN1-208ENST00000553370 PHF8Q9UPP1 1060 aa14.56□□□□□ -0.08
ACTN1-208ENST00000553370 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
ACTN1-208ENST00000553370 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
ACTN1-208ENST00000553370 PRAM1Q96QH2 718 aa14.55□□□□□ -0.08
ACTN1-208ENST00000553370 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
ACTN1-208ENST00000553370 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
ACTN1-208ENST00000553370 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
ACTN1-208ENST00000553370 SPATA31A3Q5VYP0 1347 aa14.54□□□□□ -0.08
ACTN1-208ENST00000553370 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
ACTN1-208ENST00000553370 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
ACTN1-208ENST00000553370 BCL9LQ86UU0 1499 aa14.53□□□□□ -0.08
ACTN1-208ENST00000553370 EIF3AQ14152 1382 aaKnown RBP14.53□□□□□ -0.08
ACTN1-208ENST00000553370 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
ACTN1-208ENST00000553370 ARHGEF10O15013 1369 aa14.52□□□□□ -0.08
ACTN1-208ENST00000553370 A0A0G2JS52 829 aa14.52□□□□□ -0.09
ACTN1-208ENST00000553370 MYT1Q01538 1121 aa14.52□□□□□ -0.09
ACTN1-208ENST00000553370 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
ACTN1-208ENST00000553370 GJD4Q96KN9 370 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-208ENST00000553370 GLI3P10071 1580 aa14.51□□□□□ -0.09
ACTN1-208ENST00000553370 RALGAPBQ86X10 1494 aa14.51□□□□□ -0.09
ACTN1-208ENST00000553370 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
ACTN1-208ENST00000553370 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
ACTN1-208ENST00000553370 KDM2AQ9Y2K7 1162 aa14.51□□□□□ -0.09
ACTN1-208ENST00000553370 ARHGEF28Q8N1W1 1705 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms