RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
CHD8-203ENST00000553283 STK26Q9P289 416 aa14□□□□□ -0.17
CHD8-203ENST00000553283 SPATA31E1Q6ZUB1 1445 aa13.99□□□□□ -0.17
CHD8-203ENST00000553283 PPLO60437 1756 aa13.99□□□□□ -0.17
CHD8-203ENST00000553283 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
CHD8-203ENST00000553283 LAMC1P11047 1609 aa13.99□□□□□ -0.17
CHD8-203ENST00000553283 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
CHD8-203ENST00000553283 NPHP3Q7Z494 1330 aa13.98□□□□□ -0.17
CHD8-203ENST00000553283 USP21Q9UK80 565 aa13.98□□□□□ -0.17
CHD8-203ENST00000553283 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
CHD8-203ENST00000553283 FOXO3O43524 673 aa13.97□□□□□ -0.17
CHD8-203ENST00000553283 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
CHD8-203ENST00000553283 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
CHD8-203ENST00000553283 TECPR2O15040 1411 aa13.97□□□□□ -0.17
CHD8-203ENST00000553283 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.17
CHD8-203ENST00000553283 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
CHD8-203ENST00000553283 RGS12O14924 1447 aa13.96□□□□□ -0.18
CHD8-203ENST00000553283 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
CHD8-203ENST00000553283 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
CHD8-203ENST00000553283 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
CHD8-203ENST00000553283 CDC42BPGQ6DT37 1551 aa13.94□□□□□ -0.18
CHD8-203ENST00000553283 C14orf93Q9H972 538 aaKnown RBP13.94□□□□□ -0.18
CHD8-203ENST00000553283 PLEKHH1Q9ULM0 1364 aa13.94□□□□□ -0.18
CHD8-203ENST00000553283 PIK3C2GO75747 1445 aa13.93□□□□□ -0.18
CHD8-203ENST00000553283 PXDNQ92626 1479 aa13.93□□□□□ -0.18
CHD8-203ENST00000553283 MYOM2P54296 1465 aa13.92□□□□□ -0.18
CHD8-203ENST00000553283 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
CHD8-203ENST00000553283 ATRNO75882 1429 aa13.9□□□□□ -0.18
CHD8-203ENST00000553283 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
CHD8-203ENST00000553283 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
CHD8-203ENST00000553283 BCL9LQ86UU0 1499 aa13.89□□□□□ -0.19
CHD8-203ENST00000553283 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
CHD8-203ENST00000553283 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
CHD8-203ENST00000553283 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
CHD8-203ENST00000553283 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
CHD8-203ENST00000553283 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
CHD8-203ENST00000553283 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
CHD8-203ENST00000553283 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
CHD8-203ENST00000553283 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
CHD8-203ENST00000553283 PSME1Q06323 249 aa13.86□□□□□ -0.19
CHD8-203ENST00000553283 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
CHD8-203ENST00000553283 KNDC1Q76NI1 1749 aa13.85□□□□□ -0.19
CHD8-203ENST00000553283 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
CHD8-203ENST00000553283 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD8-203ENST00000553283 POGKQ9P215 609 aa13.84□□□□□ -0.19
CHD8-203ENST00000553283 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.19
CHD8-203ENST00000553283 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
CHD8-203ENST00000553283 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
CHD8-203ENST00000553283 SLIT2O94813 1529 aa13.82□□□□□ -0.2
CHD8-203ENST00000553283 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
CHD8-203ENST00000553283 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
CHD8-203ENST00000553283 KIF1AQ12756 1690 aa13.81□□□□□ -0.2
CHD8-203ENST00000553283 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
CHD8-203ENST00000553283 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
CHD8-203ENST00000553283 LMOD2Q6P5Q4 547 aa13.8□□□□□ -0.2
CHD8-203ENST00000553283 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
CHD8-203ENST00000553283 MARF1Q9Y4F3 1742 aaKnown RBP13.78□□□□□ -0.2
CHD8-203ENST00000553283 VPS72Q15906 364 aa13.78□□□□□ -0.2
CHD8-203ENST00000553283 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
CHD8-203ENST00000553283 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
CHD8-203ENST00000553283 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
CHD8-203ENST00000553283 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
CHD8-203ENST00000553283 HRCP23327 699 aa13.77□□□□□ -0.21
CHD8-203ENST00000553283 HIRIP3Q9BW71 556 aaPredicted RBP13.77□□□□□ -0.21
CHD8-203ENST00000553283 ADGRB1O14514 1584 aa13.76□□□□□ -0.21
CHD8-203ENST00000553283 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
CHD8-203ENST00000553283 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
CHD8-203ENST00000553283 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
CHD8-203ENST00000553283 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
CHD8-203ENST00000553283 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
CHD8-203ENST00000553283 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.75□□□□□ -0.21
CHD8-203ENST00000553283 GLI3P10071 1580 aa13.75□□□□□ -0.21
CHD8-203ENST00000553283 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
CHD8-203ENST00000553283 GPRASP1Q5JY77 1395 aa13.74□□□□□ -0.21
CHD8-203ENST00000553283 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
CHD8-203ENST00000553283 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
CHD8-203ENST00000553283 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
CHD8-203ENST00000553283 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
CHD8-203ENST00000553283 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
CHD8-203ENST00000553283 EP400Q96L91 3159 aa13.71□□□□□ -0.21
CHD8-203ENST00000553283 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
CHD8-203ENST00000553283 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
CHD8-203ENST00000553283 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
CHD8-203ENST00000553283 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
CHD8-203ENST00000553283 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
CHD8-203ENST00000553283 DEFB132Q7Z7B7 95 aa13.69□□□□□ -0.22
CHD8-203ENST00000553283 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
CHD8-203ENST00000553283 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
CHD8-203ENST00000553283 FAM98CQ17RN3 349 aaKnown RBP13.68□□□□□ -0.22
CHD8-203ENST00000553283 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
CHD8-203ENST00000553283 A0A0G2JS52 829 aa13.67□□□□□ -0.22
CHD8-203ENST00000553283 MYT1Q01538 1121 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms