RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
CBX5-205ENST00000552562 AMOTL2Q9Y2J4 779 aa11.35□□□□□ -0.59
CBX5-205ENST00000552562 PTPRUQ92729 1446 aa11.35□□□□□ -0.59
CBX5-205ENST00000552562 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
CBX5-205ENST00000552562 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
CBX5-205ENST00000552562 ROCK2O75116 1388 aaKnown RBP11.33□□□□□ -0.6
CBX5-205ENST00000552562 KCNA6P17658 529 aa11.33□□□□□ -0.6
CBX5-205ENST00000552562 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
CBX5-205ENST00000552562 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
CBX5-205ENST00000552562 TRAK1Q9UPV9 953 aa11.32□□□□□ -0.6
CBX5-205ENST00000552562 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
CBX5-205ENST00000552562 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
CBX5-205ENST00000552562 LRPPRCP42704 1394 aaKnown RBP11.31□□□□□ -0.6
CBX5-205ENST00000552562 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
CBX5-205ENST00000552562 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
CBX5-205ENST00000552562 RALGAPBQ86X10 1494 aa11.31□□□□□ -0.6
CBX5-205ENST00000552562 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
CBX5-205ENST00000552562 ROBO2Q9HCK4 1378 aa11.29□□□□□ -0.6
CBX5-205ENST00000552562 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
CBX5-205ENST00000552562 LAMC1P11047 1609 aa11.29□□□□□ -0.6
CBX5-205ENST00000552562 TRPM1Q7Z4N2 1603 aa11.29□□□□□ -0.6
CBX5-205ENST00000552562 WAPLQ7Z5K2 1190 aa11.29□□□□□ -0.6
CBX5-205ENST00000552562 PROSER2Q86WR7 435 aaPredicted RBP11.29□□□□□ -0.6
CBX5-205ENST00000552562 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
CBX5-205ENST00000552562 ABCC11Q96J66 1382 aa11.28□□□□□ -0.6
CBX5-205ENST00000552562 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
CBX5-205ENST00000552562 SAFB2Q14151 953 aaKnown RBP eCLIP11.28□□□□□ -0.6
CBX5-205ENST00000552562 PRAM1Q96QH2 718 aa11.28□□□□□ -0.6
CBX5-205ENST00000552562 GABBR2O75899 941 aa11.27□□□□□ -0.61
CBX5-205ENST00000552562 POGKQ9P215 609 aa11.27□□□□□ -0.61
CBX5-205ENST00000552562 NWD1Q149M9 1564 aa11.27□□□□□ -0.61
CBX5-205ENST00000552562 TECPR2O15040 1411 aa11.26□□□□□ -0.61
CBX5-205ENST00000552562 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
CBX5-205ENST00000552562 LTBP4Q8N2S1 1624 aa11.26□□□□□ -0.61
CBX5-205ENST00000552562 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
CBX5-205ENST00000552562 XRN1Q8IZH2 1706 aaKnown RBP11.26□□□□□ -0.61
CBX5-205ENST00000552562 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
CBX5-205ENST00000552562 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
CBX5-205ENST00000552562 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
CBX5-205ENST00000552562 C14orf37Q86TY3 774 aa11.25□□□□□ -0.61
CBX5-205ENST00000552562 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
CBX5-205ENST00000552562 CPS1P31327 1500 aa11.25□□□□□ -0.61
CBX5-205ENST00000552562 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
CBX5-205ENST00000552562 STRCP1A6NGW2 1772 aa11.24□□□□□ -0.61
CBX5-205ENST00000552562 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
CBX5-205ENST00000552562 USP47Q96K76 1375 aa11.24□□□□□ -0.61
CBX5-205ENST00000552562 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
CBX5-205ENST00000552562 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
CBX5-205ENST00000552562 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
CBX5-205ENST00000552562 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
CBX5-205ENST00000552562 DLC1Q96QB1 1528 aa11.23□□□□□ -0.61
CBX5-205ENST00000552562 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
CBX5-205ENST00000552562 CHD2O14647 1828 aaKnown RBP11.22□□□□□ -0.61
CBX5-205ENST00000552562 EIF3AQ14152 1382 aaKnown RBP11.22□□□□□ -0.61
CBX5-205ENST00000552562 LHX8Q68G74 356 aa11.22□□□□□ -0.61
CBX5-205ENST00000552562 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
CBX5-205ENST00000552562 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
CBX5-205ENST00000552562 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
CBX5-205ENST00000552562 KNDC1Q76NI1 1749 aa11.2□□□□□ -0.62
CBX5-205ENST00000552562 ADGRL3Q9HAR2 1447 aa11.19□□□□□ -0.62
CBX5-205ENST00000552562 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
CBX5-205ENST00000552562 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
CBX5-205ENST00000552562 MSH6P52701 1360 aa11.18□□□□□ -0.62
CBX5-205ENST00000552562 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
CBX5-205ENST00000552562 TESK2Q96S53 571 aa11.18□□□□□ -0.62
CBX5-205ENST00000552562 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
CBX5-205ENST00000552562 ATF3P18847 181 aa11.17□□□□□ -0.62
CBX5-205ENST00000552562 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
CBX5-205ENST00000552562 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
CBX5-205ENST00000552562 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
CBX5-205ENST00000552562 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
CBX5-205ENST00000552562 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
CBX5-205ENST00000552562 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
CBX5-205ENST00000552562 EVC2Q86UK5 1308 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 TMF1P82094 1093 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 NALCNQ8IZF0 1738 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 DISP3Q9P2K9 1392 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 SBNO2Q9Y2G9 1366 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
CBX5-205ENST00000552562 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
CBX5-205ENST00000552562 QRICH2Q9H0J4 1663 aa11.13□□□□□ -0.63
CBX5-205ENST00000552562 PRR36Q9H6K5 1346 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 DCCP43146 1447 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 MST1RQ04912 1400 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
CBX5-205ENST00000552562 PIP4K2BP78356 416 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 NUDT16Q96DE0 195 aaKnown RBP11.12□□□□□ -0.63
CBX5-205ENST00000552562 SLAIN2Q9P270 581 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
CBX5-205ENST00000552562 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
CBX5-205ENST00000552562 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
CBX5-205ENST00000552562 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
CBX5-205ENST00000552562 TOM1O60784 492 aa11.11□□□□□ -0.63
CBX5-205ENST00000552562 ORAI2Q96SN7 254 aa11.11□□□□□ -0.63
CBX5-205ENST00000552562 C1orf167Q5SNV9 1468 aa11.11□□□□□ -0.63
CBX5-205ENST00000552562 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
CBX5-205ENST00000552562 ESCO1Q5FWF5 840 aa11.1□□□□□ -0.63
CBX5-205ENST00000552562 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
CBX5-205ENST00000552562 PMFBP1Q8TBY8 1022 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms