RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 XIRP1Q702N8 1843 aaKnown RBP10□□□□□ -0.81
PFDN5-217ENST00000552548 LAMC1P11047 1609 aa10□□□□□ -0.81
PFDN5-217ENST00000552548 CDK19Q9BWU1 502 aa9.99□□□□□ -0.81
PFDN5-217ENST00000552548 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
PFDN5-217ENST00000552548 DLC1Q96QB1 1528 aa9.98□□□□□ -0.81
PFDN5-217ENST00000552548 QRICH2Q9H0J4 1663 aa9.98□□□□□ -0.81
PFDN5-217ENST00000552548 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
PFDN5-217ENST00000552548 NALCNQ8IZF0 1738 aa9.98□□□□□ -0.81
PFDN5-217ENST00000552548 ORAI2Q96SN7 254 aa9.97□□□□□ -0.81
PFDN5-217ENST00000552548 PIK3R4Q99570 1358 aa9.97□□□□□ -0.81
PFDN5-217ENST00000552548 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
PFDN5-217ENST00000552548 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.81
PFDN5-217ENST00000552548 C14orf37Q86TY3 774 aa9.96□□□□□ -0.82
PFDN5-217ENST00000552548 FAM135BQ49AJ0 1406 aa9.96□□□□□ -0.82
PFDN5-217ENST00000552548 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
PFDN5-217ENST00000552548 XPCQ01831 940 aaPredicted RBP9.95□□□□□ -0.82
PFDN5-217ENST00000552548 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
PFDN5-217ENST00000552548 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
PFDN5-217ENST00000552548 SLC12A5Q9H2X9 1139 aa9.95□□□□□ -0.82
PFDN5-217ENST00000552548 DMRT2Q9Y5R5 561 aa9.95□□□□□ -0.82
PFDN5-217ENST00000552548 USP32Q8NFA0 1604 aa9.94□□□□□ -0.82
PFDN5-217ENST00000552548 ADGRL3Q9HAR2 1447 aa9.94□□□□□ -0.82
PFDN5-217ENST00000552548 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
PFDN5-217ENST00000552548 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
PFDN5-217ENST00000552548 NKTRP30414 1462 aaKnown RBP9.93□□□□□ -0.82
PFDN5-217ENST00000552548 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
PFDN5-217ENST00000552548 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
PFDN5-217ENST00000552548 DDX10Q13206 875 aaKnown RBP9.93□□□□□ -0.82
PFDN5-217ENST00000552548 NUDT16Q96DE0 195 aaKnown RBP9.93□□□□□ -0.82
PFDN5-217ENST00000552548 CABP1Q9NZU7 370 aa9.92□□□□□ -0.82
PFDN5-217ENST00000552548 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
PFDN5-217ENST00000552548 MST1RQ04912 1400 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
PFDN5-217ENST00000552548 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 CERKQ8TCT0 537 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 CARD14Q9BXL6 1004 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 ATP7BP35670 1465 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
PFDN5-217ENST00000552548 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.82
PFDN5-217ENST00000552548 PIP4K2BP78356 416 aa9.9□□□□□ -0.82
PFDN5-217ENST00000552548 C19orf44Q9H6X5 657 aa9.9□□□□□ -0.82
PFDN5-217ENST00000552548 C1orf167Q5SNV9 1468 aa9.9□□□□□ -0.83
PFDN5-217ENST00000552548 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
PFDN5-217ENST00000552548 FBLN1P23142 703 aa9.89□□□□□ -0.83
PFDN5-217ENST00000552548 TMF1P82094 1093 aa9.89□□□□□ -0.83
PFDN5-217ENST00000552548 ADGRB2O60241 1585 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 MYOM1P52179 1685 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 ESCO1Q5FWF5 840 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 BRINP3Q76B58 766 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 PANK3Q9H999 370 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 PPIP5K1Q6PFW1 1433 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
PFDN5-217ENST00000552548 FOXO3O43524 673 aa9.87□□□□□ -0.83
PFDN5-217ENST00000552548 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
PFDN5-217ENST00000552548 SLAIN2Q9P270 581 aa9.87□□□□□ -0.83
PFDN5-217ENST00000552548 CDC42BPGQ6DT37 1551 aa9.87□□□□□ -0.83
PFDN5-217ENST00000552548 MSH6P52701 1360 aa9.87□□□□□ -0.83
PFDN5-217ENST00000552548 ACEP12821 1306 aa9.86□□□□□ -0.83
PFDN5-217ENST00000552548 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
PFDN5-217ENST00000552548 ATF3P18847 181 aa9.86□□□□□ -0.83
PFDN5-217ENST00000552548 A0A1W2PP64 1363 aa9.86□□□□□ -0.83
PFDN5-217ENST00000552548 SCAF1Q9H7N4 1312 aaKnown RBP9.85□□□□□ -0.83
PFDN5-217ENST00000552548 PHF8Q9UPP1 1060 aa9.85□□□□□ -0.83
PFDN5-217ENST00000552548 TOPAZ1Q8N9V7 1692 aa9.84□□□□□ -0.83
PFDN5-217ENST00000552548 PER1O15534 1290 aaPredicted RBP9.84□□□□□ -0.83
PFDN5-217ENST00000552548 NME9Q86XW9 330 aa9.84□□□□□ -0.83
PFDN5-217ENST00000552548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
PFDN5-217ENST00000552548 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
PFDN5-217ENST00000552548 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
PFDN5-217ENST00000552548 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
PFDN5-217ENST00000552548 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
PFDN5-217ENST00000552548 CADPS2Q86UW7 1296 aa9.82□□□□□ -0.84
PFDN5-217ENST00000552548 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
PFDN5-217ENST00000552548 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
PFDN5-217ENST00000552548 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
PFDN5-217ENST00000552548 NCOA3Q9Y6Q9 1424 aa9.82□□□□□ -0.84
PFDN5-217ENST00000552548 CCDC184Q52MB2 194 aa9.81□□□□□ -0.84
PFDN5-217ENST00000552548 KRT28Q7Z3Y7 464 aa9.81□□□□□ -0.84
PFDN5-217ENST00000552548 GGNBP2Q9H3C7 697 aa9.81□□□□□ -0.84
PFDN5-217ENST00000552548 SSH2Q76I76 1423 aa9.81□□□□□ -0.84
PFDN5-217ENST00000552548 ANKARQ7Z5J8 1434 aa9.81□□□□□ -0.84
PFDN5-217ENST00000552548 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 POLR3AO14802 1390 aaPredicted RBP9.8□□□□□ -0.84
PFDN5-217ENST00000552548 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 SOX12O15370 315 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 HSPA1LP34931 641 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 DCCP43146 1447 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
PFDN5-217ENST00000552548 PXDNQ92626 1479 aa9.79□□□□□ -0.84
PFDN5-217ENST00000552548 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
PFDN5-217ENST00000552548 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-217ENST00000552548 TNNT2P45379 298 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-217ENST00000552548 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-217ENST00000552548 ANKRD36BQ8N2N9 1353 aa9.78□□□□□ -0.84
PFDN5-217ENST00000552548 FYB1O15117 783 aa9.78□□□□□ -0.84
PFDN5-217ENST00000552548 PSME1Q06323 249 aa9.78□□□□□ -0.84
PFDN5-217ENST00000552548 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
PFDN5-217ENST00000552548 USP6P35125 1406 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms