RNA–Protein interactions for RNA: ENST00000551692.5

PACS2-211, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-211ENST00000551692 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
PACS2-211ENST00000551692 ANP32CO43423 234 aa18.66■□□□□ 0.58
PACS2-211ENST00000551692 TESK2Q96S53 571 aa18.66■□□□□ 0.58
PACS2-211ENST00000551692 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
PACS2-211ENST00000551692 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
PACS2-211ENST00000551692 TULP4Q9NRJ4 1543 aa18.65■□□□□ 0.58
PACS2-211ENST00000551692 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
PACS2-211ENST00000551692 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
PACS2-211ENST00000551692 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
PACS2-211ENST00000551692 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
PACS2-211ENST00000551692 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
PACS2-211ENST00000551692 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
PACS2-211ENST00000551692 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
PACS2-211ENST00000551692 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
PACS2-211ENST00000551692 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
PACS2-211ENST00000551692 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
PACS2-211ENST00000551692 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
PACS2-211ENST00000551692 ZMYND15Q9H091 742 aa18.59■□□□□ 0.57
PACS2-211ENST00000551692 NBPF1Q3BBV0 1214 aa18.59■□□□□ 0.57
PACS2-211ENST00000551692 GLIPR1L2Q4G1C9 344 aa18.59■□□□□ 0.57
PACS2-211ENST00000551692 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
PACS2-211ENST00000551692 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
PACS2-211ENST00000551692 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
PACS2-211ENST00000551692 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.56
PACS2-211ENST00000551692 NRKQ7Z2Y5 1582 aa18.58■□□□□ 0.56
PACS2-211ENST00000551692 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
PACS2-211ENST00000551692 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
PACS2-211ENST00000551692 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
PACS2-211ENST00000551692 PTPRUQ92729 1446 aa18.56■□□□□ 0.56
PACS2-211ENST00000551692 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
PACS2-211ENST00000551692 WASHC2AQ641Q2 1341 aa18.56■□□□□ 0.56
PACS2-211ENST00000551692 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
PACS2-211ENST00000551692 MLECQ14165 292 aa18.55■□□□□ 0.56
PACS2-211ENST00000551692 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
PACS2-211ENST00000551692 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
PACS2-211ENST00000551692 NKTRP30414 1462 aaKnown RBP18.54■□□□□ 0.56
PACS2-211ENST00000551692 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
PACS2-211ENST00000551692 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
PACS2-211ENST00000551692 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
PACS2-211ENST00000551692 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
PACS2-211ENST00000551692 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
PACS2-211ENST00000551692 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.55
PACS2-211ENST00000551692 METP08581 1390 aa18.51■□□□□ 0.55
PACS2-211ENST00000551692 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
PACS2-211ENST00000551692 KIF7Q2M1P5 1343 aa18.51■□□□□ 0.55
PACS2-211ENST00000551692 LTKP29376 864 aa18.51■□□□□ 0.55
PACS2-211ENST00000551692 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
PACS2-211ENST00000551692 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
PACS2-211ENST00000551692 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
PACS2-211ENST00000551692 LRRC7Q96NW7 1537 aa18.5■□□□□ 0.55
PACS2-211ENST00000551692 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
PACS2-211ENST00000551692 KIF20BQ96Q89 1820 aa18.47■□□□□ 0.55
PACS2-211ENST00000551692 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
PACS2-211ENST00000551692 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
PACS2-211ENST00000551692 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
PACS2-211ENST00000551692 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
PACS2-211ENST00000551692 SLC4A3P48751 1232 aa18.46■□□□□ 0.54
PACS2-211ENST00000551692 NAP1L5Q96NT1 182 aaPredicted RBP18.46■□□□□ 0.54
PACS2-211ENST00000551692 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.54
PACS2-211ENST00000551692 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
PACS2-211ENST00000551692 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
PACS2-211ENST00000551692 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
PACS2-211ENST00000551692 MARF1Q9Y4F3 1742 aaKnown RBP18.44■□□□□ 0.54
PACS2-211ENST00000551692 ATP7BP35670 1465 aa18.43■□□□□ 0.54
PACS2-211ENST00000551692 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
PACS2-211ENST00000551692 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
PACS2-211ENST00000551692 KIF1AQ12756 1690 aa18.39■□□□□ 0.54
PACS2-211ENST00000551692 MST1RQ04912 1400 aa18.39■□□□□ 0.53
PACS2-211ENST00000551692 ROBO2Q9HCK4 1378 aa18.38■□□□□ 0.53
PACS2-211ENST00000551692 DCCP43146 1447 aa18.38■□□□□ 0.53
PACS2-211ENST00000551692 ARID3AQ99856 593 aa18.38■□□□□ 0.53
PACS2-211ENST00000551692 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
PACS2-211ENST00000551692 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
PACS2-211ENST00000551692 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
PACS2-211ENST00000551692 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
PACS2-211ENST00000551692 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
PACS2-211ENST00000551692 CDCA8Q53HL2 280 aa18.36■□□□□ 0.53
PACS2-211ENST00000551692 TMF1P82094 1093 aa18.35■□□□□ 0.53
PACS2-211ENST00000551692 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
PACS2-211ENST00000551692 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
PACS2-211ENST00000551692 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
PACS2-211ENST00000551692 TRPM3Q9HCF6 1732 aaPredicted RBP18.34■□□□□ 0.53
PACS2-211ENST00000551692 INSRP06213 1382 aa18.33■□□□□ 0.52
PACS2-211ENST00000551692 CHGAP10645 457 aaKnown RBP18.33■□□□□ 0.52
PACS2-211ENST00000551692 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
PACS2-211ENST00000551692 PARD3Q8TEW0 1356 aa18.32■□□□□ 0.52
PACS2-211ENST00000551692 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PACS2-211ENST00000551692 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
PACS2-211ENST00000551692 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
PACS2-211ENST00000551692 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
PACS2-211ENST00000551692 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
PACS2-211ENST00000551692 FRAT1Q92837 279 aaPredicted RBP18.3■□□□□ 0.52
PACS2-211ENST00000551692 ANKRD36BQ8N2N9 1353 aa18.29■□□□□ 0.52
PACS2-211ENST00000551692 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
PACS2-211ENST00000551692 BRD4O60885 1362 aaPredicted RBP18.28■□□□□ 0.52
PACS2-211ENST00000551692 LTBP4Q8N2S1 1624 aa18.28■□□□□ 0.52
PACS2-211ENST00000551692 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
PACS2-211ENST00000551692 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
PACS2-211ENST00000551692 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
PACS2-211ENST00000551692 NSD2O96028 1365 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms