RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 TECPR2O15040 1411 aa14.33□□□□□ -0.11
GCN1-208ENST00000551549 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
GCN1-208ENST00000551549 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
GCN1-208ENST00000551549 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 SHPRHQ149N8 1683 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 ESCO1Q5FWF5 840 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 PNPLA6Q8IY17 1366 aa14.31□□□□□ -0.12
GCN1-208ENST00000551549 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
GCN1-208ENST00000551549 MYOM2P54296 1465 aa14.3□□□□□ -0.12
GCN1-208ENST00000551549 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
GCN1-208ENST00000551549 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
GCN1-208ENST00000551549 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
GCN1-208ENST00000551549 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
GCN1-208ENST00000551549 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
GCN1-208ENST00000551549 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
GCN1-208ENST00000551549 AFF2P51816 1311 aa14.27□□□□□ -0.12
GCN1-208ENST00000551549 FOXO3O43524 673 aa14.27□□□□□ -0.13
GCN1-208ENST00000551549 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.13
GCN1-208ENST00000551549 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.13
GCN1-208ENST00000551549 PRAM1Q96QH2 718 aa14.27□□□□□ -0.13
GCN1-208ENST00000551549 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
GCN1-208ENST00000551549 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
GCN1-208ENST00000551549 NPHP3Q7Z494 1330 aa14.25□□□□□ -0.13
GCN1-208ENST00000551549 LAMC1P11047 1609 aa14.25□□□□□ -0.13
GCN1-208ENST00000551549 TRAK1Q9UPV9 953 aa14.24□□□□□ -0.13
GCN1-208ENST00000551549 KNDC1Q76NI1 1749 aa14.24□□□□□ -0.13
GCN1-208ENST00000551549 RXRBP28702 533 aa14.23□□□□□ -0.13
GCN1-208ENST00000551549 POGKQ9P215 609 aa14.23□□□□□ -0.13
GCN1-208ENST00000551549 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
GCN1-208ENST00000551549 PXDNQ92626 1479 aa14.22□□□□□ -0.13
GCN1-208ENST00000551549 QTRT2Q9H974 415 aaKnown RBP14.21□□□□□ -0.13
GCN1-208ENST00000551549 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
GCN1-208ENST00000551549 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
GCN1-208ENST00000551549 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
GCN1-208ENST00000551549 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
GCN1-208ENST00000551549 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
GCN1-208ENST00000551549 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
GCN1-208ENST00000551549 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
GCN1-208ENST00000551549 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
GCN1-208ENST00000551549 SPATA31A3Q5VYP0 1347 aa14.17□□□□□ -0.14
GCN1-208ENST00000551549 FNBP4Q8N3X1 1017 aaPredicted RBP14.17□□□□□ -0.14
GCN1-208ENST00000551549 USP21Q9UK80 565 aa14.17□□□□□ -0.14
GCN1-208ENST00000551549 RBM6P78332 1123 aaKnown RBP14.16□□□□□ -0.14
GCN1-208ENST00000551549 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
GCN1-208ENST00000551549 SRCAPQ6ZRS2 3230 aa14.16□□□□□ -0.14
GCN1-208ENST00000551549 EP400Q96L91 3159 aa14.15□□□□□ -0.14
GCN1-208ENST00000551549 PSME1Q06323 249 aa14.15□□□□□ -0.14
GCN1-208ENST00000551549 COL22A1Q8NFW1 1626 aaPredicted RBP14.15□□□□□ -0.14
GCN1-208ENST00000551549 PRR36Q9H6K5 1346 aa14.14□□□□□ -0.15
GCN1-208ENST00000551549 WASLO00401 505 aaPredicted RBP14.13□□□□□ -0.15
GCN1-208ENST00000551549 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
GCN1-208ENST00000551549 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
GCN1-208ENST00000551549 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
GCN1-208ENST00000551549 ANKARQ7Z5J8 1434 aa14.13□□□□□ -0.15
GCN1-208ENST00000551549 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
GCN1-208ENST00000551549 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
GCN1-208ENST00000551549 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
GCN1-208ENST00000551549 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
GCN1-208ENST00000551549 CABLES1Q8TDN4 633 aa14.12□□□□□ -0.15
GCN1-208ENST00000551549 RGS12O14924 1447 aa14.12□□□□□ -0.15
GCN1-208ENST00000551549 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 ADGRB2O60241 1585 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 TNS3Q68CZ2 1445 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 RGPD8O14715 1765 aaPredicted RBP14.1□□□□□ -0.15
GCN1-208ENST00000551549 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 BCL9LQ86UU0 1499 aa14.1□□□□□ -0.15
GCN1-208ENST00000551549 ATRNO75882 1429 aa14.09□□□□□ -0.15
GCN1-208ENST00000551549 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
GCN1-208ENST00000551549 EIF3AQ14152 1382 aaKnown RBP14.09□□□□□ -0.15
GCN1-208ENST00000551549 HAP1P54257 671 aaPredicted RBP14.08□□□□□ -0.16
GCN1-208ENST00000551549 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
GCN1-208ENST00000551549 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
GCN1-208ENST00000551549 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
GCN1-208ENST00000551549 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
GCN1-208ENST00000551549 UNC5CLQ8IV45 518 aa14.07□□□□□ -0.16
GCN1-208ENST00000551549 NGDNQ8NEJ9 315 aaKnown RBP14.07□□□□□ -0.16
GCN1-208ENST00000551549 ARHGEF10O15013 1369 aa14.07□□□□□ -0.16
GCN1-208ENST00000551549 GPRASP1Q5JY77 1395 aa14.07□□□□□ -0.16
GCN1-208ENST00000551549 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
GCN1-208ENST00000551549 SLIT2O94813 1529 aa14.05□□□□□ -0.16
GCN1-208ENST00000551549 ARHGEF28Q8N1W1 1705 aaKnown RBP14.04□□□□□ -0.16
GCN1-208ENST00000551549 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
GCN1-208ENST00000551549 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
GCN1-208ENST00000551549 ATP7BP35670 1465 aa14.03□□□□□ -0.16
GCN1-208ENST00000551549 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
GCN1-208ENST00000551549 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
GCN1-208ENST00000551549 RALGAPBQ86X10 1494 aa14.01□□□□□ -0.17
GCN1-208ENST00000551549 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
GCN1-208ENST00000551549 MARF1Q9Y4F3 1742 aaKnown RBP14.01□□□□□ -0.17
GCN1-208ENST00000551549 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
GCN1-208ENST00000551549 ACEP12821 1306 aa14□□□□□ -0.17
GCN1-208ENST00000551549 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
GCN1-208ENST00000551549 VPS72Q15906 364 aa14□□□□□ -0.17
GCN1-208ENST00000551549 NBPF8Q3BBV2 869 aa14□□□□□ -0.17
GCN1-208ENST00000551549 CABP2Q9NPB3 220 aa14□□□□□ -0.17
GCN1-208ENST00000551549 TRPM3Q9HCF6 1732 aaPredicted RBP14□□□□□ -0.17
GCN1-208ENST00000551549 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms