RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ADAMTS13Q76LX8 1427 aa26.7■■□□□ 1.86
SSH1-209ENST00000551165 SENP3-EIF4A1A0A087X0R7 540 aa26.69■■□□□ 1.86
SSH1-209ENST00000551165 ABCC11Q96J66 1382 aa26.69■■□□□ 1.86
SSH1-209ENST00000551165 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
SSH1-209ENST00000551165 ADAMTSL3P82987 1691 aa26.67■■□□□ 1.86
SSH1-209ENST00000551165 DLC1Q96QB1 1528 aa26.67■■□□□ 1.86
SSH1-209ENST00000551165 PLEKHG1Q9ULL1 1385 aa26.66■■□□□ 1.86
SSH1-209ENST00000551165 ARHGAP23Q9P227 1491 aa26.66■■□□□ 1.86
SSH1-209ENST00000551165 SLC26A8Q96RN1 970 aa26.65■■□□□ 1.86
SSH1-209ENST00000551165 PUS7Q96PZ0 661 aaKnown RBP26.65■■□□□ 1.86
SSH1-209ENST00000551165 SLIT1O75093 1534 aa26.65■■□□□ 1.86
SSH1-209ENST00000551165 NSD3Q9BZ95 1437 aa26.64■■□□□ 1.86
SSH1-209ENST00000551165 PPP2R1AP30153 589 aa26.64■■□□□ 1.85
SSH1-209ENST00000551165 CDK19Q9BWU1 502 aa26.63■■□□□ 1.85
SSH1-209ENST00000551165 EID1Q9Y6B2 187 aa26.63■■□□□ 1.85
SSH1-209ENST00000551165 NPC1L1Q9UHC9 1359 aa26.63■■□□□ 1.85
SSH1-209ENST00000551165 THEMISQ8N1K5 641 aaPredicted RBP26.63■■□□□ 1.85
SSH1-209ENST00000551165 CEP170BQ9Y4F5 1589 aaPredicted RBP26.59■■□□□ 1.85
SSH1-209ENST00000551165 MED14O60244 1454 aa26.59■■□□□ 1.85
SSH1-209ENST00000551165 ANKRD36BQ8N2N9 1353 aa26.57■■□□□ 1.84
SSH1-209ENST00000551165 ROBO2Q9HCK4 1378 aa26.57■■□□□ 1.84
SSH1-209ENST00000551165 TECPR2O15040 1411 aa26.57■■□□□ 1.84
SSH1-209ENST00000551165 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
SSH1-209ENST00000551165 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
SSH1-209ENST00000551165 ZBED9Q6R2W3 1325 aa26.55■■□□□ 1.84
SSH1-209ENST00000551165 A0A1W2PP64 1363 aa26.55■■□□□ 1.84
SSH1-209ENST00000551165 ATAD2Q6PL18 1390 aa26.54■■□□□ 1.84
SSH1-209ENST00000551165 CPS1P31327 1500 aa26.54■■□□□ 1.84
SSH1-209ENST00000551165 CD163L1Q9NR16 1453 aa26.53■■□□□ 1.84
SSH1-209ENST00000551165 CABP1Q9NZU7 370 aa26.53■■□□□ 1.84
SSH1-209ENST00000551165 FAM135BQ49AJ0 1406 aa26.52■■□□□ 1.84
SSH1-209ENST00000551165 SIRT1Q96EB6 747 aa26.51■■□□□ 1.83
SSH1-209ENST00000551165 WASLO00401 505 aaPredicted RBP26.5■■□□□ 1.83
SSH1-209ENST00000551165 TNNT2P45379 298 aaPredicted RBP26.5■■□□□ 1.83
SSH1-209ENST00000551165 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
SSH1-209ENST00000551165 NCKAP5LQ9HCH0 1330 aa26.48■■□□□ 1.83
SSH1-209ENST00000551165 NINLQ9Y2I6 1382 aa26.48■■□□□ 1.83
SSH1-209ENST00000551165 AMOTL2Q9Y2J4 779 aa26.48■■□□□ 1.83
SSH1-209ENST00000551165 CGNL1Q0VF96 1302 aa26.47■■□□□ 1.83
SSH1-209ENST00000551165 MORC1Q86VD1 984 aa26.47■■□□□ 1.83
SSH1-209ENST00000551165 USP32Q8NFA0 1604 aa26.47■■□□□ 1.83
SSH1-209ENST00000551165 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.83
SSH1-209ENST00000551165 ADAMTS8Q9UP79 889 aa26.45■■□□□ 1.82
SSH1-209ENST00000551165 ZNF142P52746 1687 aaPredicted RBP26.44■■□□□ 1.82
SSH1-209ENST00000551165 TERF2IPQ9NYB0 399 aa26.43■■□□□ 1.82
SSH1-209ENST00000551165 SALL2Q9Y467 1007 aaPredicted RBP26.43■■□□□ 1.82
SSH1-209ENST00000551165 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
SSH1-209ENST00000551165 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
SSH1-209ENST00000551165 GGNBP2Q9H3C7 697 aa26.41■■□□□ 1.82
SSH1-209ENST00000551165 PRR36Q9H6K5 1346 aa26.4■■□□□ 1.82
SSH1-209ENST00000551165 ANKLE2Q86XL3 938 aa26.4■■□□□ 1.82
SSH1-209ENST00000551165 HDGFL2Q7Z4V5 671 aaPredicted RBP26.39■■□□□ 1.82
SSH1-209ENST00000551165 PPIP5K1Q6PFW1 1433 aa26.38■■□□□ 1.81
SSH1-209ENST00000551165 NUTM2FA1L443 756 aa26.38■■□□□ 1.81
SSH1-209ENST00000551165 FYB1O15117 783 aa26.38■■□□□ 1.81
SSH1-209ENST00000551165 BLMP54132 1417 aaPredicted RBP26.38■■□□□ 1.81
SSH1-209ENST00000551165 DIP2AQ14689 1571 aa26.38■■□□□ 1.81
SSH1-209ENST00000551165 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
SSH1-209ENST00000551165 KCNA6P17658 529 aa26.35■■□□□ 1.81
SSH1-209ENST00000551165 SUPT16HQ9Y5B9 1047 aaKnown RBP26.35■■□□□ 1.81
SSH1-209ENST00000551165 ATP7BP35670 1465 aa26.34■■□□□ 1.81
SSH1-209ENST00000551165 NSD2O96028 1365 aa26.34■■□□□ 1.81
SSH1-209ENST00000551165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.34■■□□□ 1.81
SSH1-209ENST00000551165 CCDC61Q9Y6R9 512 aa26.34■■□□□ 1.81
SSH1-209ENST00000551165 MTHFSP49914 203 aa26.33■■□□□ 1.81
SSH1-209ENST00000551165 XRN1Q8IZH2 1706 aaKnown RBP26.33■■□□□ 1.81
SSH1-209ENST00000551165 ADGRB2O60241 1585 aa26.33■■□□□ 1.81
SSH1-209ENST00000551165 PTCH1Q13635 1447 aa26.32■■□□□ 1.8
SSH1-209ENST00000551165 CPSF1Q10570 1443 aaKnown RBP26.32■■□□□ 1.8
SSH1-209ENST00000551165 POLR3AO14802 1390 aaPredicted RBP26.31■■□□□ 1.8
SSH1-209ENST00000551165 FKBP8Q14318 412 aa26.3■■□□□ 1.8
SSH1-209ENST00000551165 INSRP06213 1382 aa26.3■■□□□ 1.8
SSH1-209ENST00000551165 CCDC146Q8IYE0 955 aa26.28■■□□□ 1.8
SSH1-209ENST00000551165 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
SSH1-209ENST00000551165 CDC42BPGQ6DT37 1551 aa26.27■■□□□ 1.8
SSH1-209ENST00000551165 SMG6Q86US8 1419 aaKnown RBP26.26■■□□□ 1.79
SSH1-209ENST00000551165 FBLN1P23142 703 aa26.26■■□□□ 1.79
SSH1-209ENST00000551165 PIK3R4Q99570 1358 aa26.25■■□□□ 1.79
SSH1-209ENST00000551165 KIF20BQ96Q89 1820 aa26.25■■□□□ 1.79
SSH1-209ENST00000551165 ANKRD26Q9UPS8 1709 aa26.25■■□□□ 1.79
SSH1-209ENST00000551165 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
SSH1-209ENST00000551165 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
SSH1-209ENST00000551165 NUDCQ9Y266 331 aa26.24■■□□□ 1.79
SSH1-209ENST00000551165 NME9Q86XW9 330 aa26.24■■□□□ 1.79
SSH1-209ENST00000551165 CHD2O14647 1828 aaKnown RBP26.23■■□□□ 1.79
SSH1-209ENST00000551165 NPHP4O75161 1426 aaPredicted RBP26.23■■□□□ 1.79
SSH1-209ENST00000551165 CDCA7LQ96GN5 454 aa26.22■■□□□ 1.79
SSH1-209ENST00000551165 NKTRP30414 1462 aaKnown RBP26.22■■□□□ 1.79
SSH1-209ENST00000551165 EDC4Q6P2E9 1401 aaKnown RBP26.22■■□□□ 1.79
SSH1-209ENST00000551165 TOPAZ1Q8N9V7 1692 aa26.21■■□□□ 1.79
SSH1-209ENST00000551165 IRX6P78412 446 aaPredicted RBP26.21■■□□□ 1.79
SSH1-209ENST00000551165 AKAP12Q02952 1782 aa26.21■■□□□ 1.79
SSH1-209ENST00000551165 ACEP12821 1306 aa26.21■■□□□ 1.79
SSH1-209ENST00000551165 MON2Q7Z3U7 1717 aa26.2■■□□□ 1.79
SSH1-209ENST00000551165 ITSN1Q15811 1721 aa26.19■■□□□ 1.78
SSH1-209ENST00000551165 RGPD8O14715 1765 aaPredicted RBP26.19■■□□□ 1.78
SSH1-209ENST00000551165 PMFBP1Q8TBY8 1022 aa26.18■■□□□ 1.78
SSH1-209ENST00000551165 PLEKHG3A1L390 1219 aa26.18■■□□□ 1.78
SSH1-209ENST00000551165 NEFLP07196 543 aa26.17■■□□□ 1.78
SSH1-209ENST00000551165 APAF1O14727 1248 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms