RNA–Protein interactions for RNA: ENST00000550548.1

AC007424.1-202, humanhuman

TSL 1 (best)

Gene AC007424.1, Length 2,945 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-202ENST00000550548 NCAPGQ9BPX3 1015 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 CUX1P39880 1505 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 TNNT3P45378 269 aaPredicted RBP15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 SPTLC3Q9NUV7 552 aa15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 DDX41Q9UJV9 622 aaKnown RBP15.23■□□□□ 0.03
AC007424.1-202ENST00000550548 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
AC007424.1-202ENST00000550548 RBSNQ9H1K0 784 aa15.22■□□□□ 0.03
AC007424.1-202ENST00000550548 CGNL1Q0VF96 1302 aa15.22■□□□□ 0.03
AC007424.1-202ENST00000550548 RAD50Q92878 1312 aa15.21■□□□□ 0.03
AC007424.1-202ENST00000550548 NOLC1Q14978 699 aaKnown RBP eCLIP15.21■□□□□ 0.03
AC007424.1-202ENST00000550548 SH3BP1Q9Y3L3 701 aa15.21■□□□□ 0.03
AC007424.1-202ENST00000550548 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.02
AC007424.1-202ENST00000550548 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 TEX14Q8IWB6 1497 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 NOP2P46087 812 aaKnown RBP15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 TSC1Q92574 1164 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 ZSCAN23Q3MJ62 389 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
AC007424.1-202ENST00000550548 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 BANK1Q8NDB2 785 aa15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 IGHDP01880 384 aa15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
AC007424.1-202ENST00000550548 IRF6O14896 467 aa15.18■□□□□ 0.02
AC007424.1-202ENST00000550548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
AC007424.1-202ENST00000550548 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
AC007424.1-202ENST00000550548 DENND4BO75064 1496 aaPredicted RBP15.18■□□□□ 0.02
AC007424.1-202ENST00000550548 CEP83Q9Y592 693 aa15.18■□□□□ 0.02
AC007424.1-202ENST00000550548 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
AC007424.1-202ENST00000550548 PARD3Q8TEW0 1356 aa15.17■□□□□ 0.02
AC007424.1-202ENST00000550548 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 JARID2Q92833 1246 aaPredicted RBP15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 ICE2Q659A1 982 aa15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
AC007424.1-202ENST00000550548 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
AC007424.1-202ENST00000550548 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
AC007424.1-202ENST00000550548 RASSF4Q9H2L5 321 aa15.15■□□□□ 0.02
AC007424.1-202ENST00000550548 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
AC007424.1-202ENST00000550548 PTPRKQ15262 1439 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 SATB1Q01826 763 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 HSP90AB3PQ58FF7 597 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 LRSAM1Q6UWE0 723 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
AC007424.1-202ENST00000550548 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 RSPH14Q9UHP6 348 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 USP47Q96K76 1375 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 GUCY2CP25092 1073 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 EP400NLQ6ZTU2 488 aa15.13■□□□□ 0.01
AC007424.1-202ENST00000550548 E9PCH4 1651 aa15.12■□□□□ 0.01
AC007424.1-202ENST00000550548 SEMA3FQ13275 785 aa15.12■□□□□ 0.01
AC007424.1-202ENST00000550548 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
AC007424.1-202ENST00000550548 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
AC007424.1-202ENST00000550548 FAM53CQ9NYF3 392 aa15.12■□□□□ 0.01
AC007424.1-202ENST00000550548 REC8O95072 547 aa15.11■□□□□ 0.01
AC007424.1-202ENST00000550548 RAD51AP2Q09MP3 1159 aa15.11■□□□□ 0.01
AC007424.1-202ENST00000550548 CYP2C19P33261 490 aa15.11■□□□□ 0.01
AC007424.1-202ENST00000550548 ANAPC15P60006 121 aa15.11■□□□□ 0.01
AC007424.1-202ENST00000550548 GOLGA6L6A8MZA4 724 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 MUM1L1Q5H9M0 696 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 CAVIN1Q6NZI2 390 aaKnown RBP15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 KDM5CP41229 1560 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 UHRF1BP1LA0JNW5 1464 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 MTUS2Q5JR59 1369 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 KIF1CO43896 1103 aaKnown RBP15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 GPATCH11Q8N954 259 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
AC007424.1-202ENST00000550548 NCBP1Q09161 790 aaKnown RBP15.09■□□□□ 0.01
AC007424.1-202ENST00000550548 HNRNPH2P55795 449 aaKnown RBP15.08■□□□□ 0
AC007424.1-202ENST00000550548 UVSSAQ2YD98 709 aa15.08■□□□□ 0
AC007424.1-202ENST00000550548 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0
AC007424.1-202ENST00000550548 MPNDQ8N594 471 aa15.08■□□□□ 0
AC007424.1-202ENST00000550548 ZNF521Q96K83 1311 aa15.08■□□□□ 0
AC007424.1-202ENST00000550548 KIF16BQ96L93 1317 aa15.08■□□□□ 0
AC007424.1-202ENST00000550548 DONSONQ9NYP3 566 aa15.08■□□□□ 0
AC007424.1-202ENST00000550548 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms