RNA–Protein interactions for RNA: ENST00000550548.1

AC007424.1-202, humanhuman

TSL 1 (best)

Gene AC007424.1, Length 2,945 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-202ENST00000550548 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
AC007424.1-202ENST00000550548 MYT1Q01538 1121 aa21.79■■□□□ 1.08
AC007424.1-202ENST00000550548 HRCP23327 699 aa21.09■□□□□ 0.97
AC007424.1-202ENST00000550548 TTBK1Q5TCY1 1321 aaPredicted RBP20.9■□□□□ 0.94
AC007424.1-202ENST00000550548 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
AC007424.1-202ENST00000550548 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
AC007424.1-202ENST00000550548 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.84
AC007424.1-202ENST00000550548 PPARGC1BQ86YN6 1023 aaKnown RBP20.18■□□□□ 0.82
AC007424.1-202ENST00000550548 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
AC007424.1-202ENST00000550548 APLP2Q06481 763 aa20.08■□□□□ 0.81
AC007424.1-202ENST00000550548 ERICH6Q7L0X2 663 aa20.01■□□□□ 0.79
AC007424.1-202ENST00000550548 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.78
AC007424.1-202ENST00000550548 BCL11AQ9H165 835 aa19.83■□□□□ 0.77
AC007424.1-202ENST00000550548 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
AC007424.1-202ENST00000550548 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
AC007424.1-202ENST00000550548 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
AC007424.1-202ENST00000550548 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
AC007424.1-202ENST00000550548 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.71
AC007424.1-202ENST00000550548 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
AC007424.1-202ENST00000550548 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
AC007424.1-202ENST00000550548 GTF3C3Q9Y5Q9 886 aa19.42■□□□□ 0.7
AC007424.1-202ENST00000550548 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
AC007424.1-202ENST00000550548 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
AC007424.1-202ENST00000550548 DAXXQ9UER7 740 aaPredicted RBP19.26■□□□□ 0.67
AC007424.1-202ENST00000550548 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
AC007424.1-202ENST00000550548 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
AC007424.1-202ENST00000550548 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
AC007424.1-202ENST00000550548 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
AC007424.1-202ENST00000550548 CLSPNQ9HAW4 1339 aa18.76■□□□□ 0.59
AC007424.1-202ENST00000550548 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
AC007424.1-202ENST00000550548 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
AC007424.1-202ENST00000550548 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.56
AC007424.1-202ENST00000550548 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
AC007424.1-202ENST00000550548 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
AC007424.1-202ENST00000550548 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
AC007424.1-202ENST00000550548 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
AC007424.1-202ENST00000550548 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
AC007424.1-202ENST00000550548 ANO8Q9HCE9 1232 aaPredicted RBP18.37■□□□□ 0.53
AC007424.1-202ENST00000550548 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
AC007424.1-202ENST00000550548 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
AC007424.1-202ENST00000550548 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
AC007424.1-202ENST00000550548 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
AC007424.1-202ENST00000550548 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
AC007424.1-202ENST00000550548 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
AC007424.1-202ENST00000550548 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
AC007424.1-202ENST00000550548 MIER1Q8N108 512 aa18.07■□□□□ 0.48
AC007424.1-202ENST00000550548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
AC007424.1-202ENST00000550548 PKNOX2Q96KN3 472 aa18.02■□□□□ 0.47
AC007424.1-202ENST00000550548 RBM19Q9Y4C8 960 aaKnown RBP17.99■□□□□ 0.47
AC007424.1-202ENST00000550548 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
AC007424.1-202ENST00000550548 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
AC007424.1-202ENST00000550548 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
AC007424.1-202ENST00000550548 MSH5O43196 834 aa17.85■□□□□ 0.45
AC007424.1-202ENST00000550548 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
AC007424.1-202ENST00000550548 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
AC007424.1-202ENST00000550548 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
AC007424.1-202ENST00000550548 FKBP8Q14318 412 aa17.55■□□□□ 0.4
AC007424.1-202ENST00000550548 NEFLP07196 543 aa17.54■□□□□ 0.4
AC007424.1-202ENST00000550548 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.39
AC007424.1-202ENST00000550548 BCANQ96GW7 911 aa17.51■□□□□ 0.39
AC007424.1-202ENST00000550548 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
AC007424.1-202ENST00000550548 ARXQ96QS3 562 aa17.48■□□□□ 0.39
AC007424.1-202ENST00000550548 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
AC007424.1-202ENST00000550548 PDE4CQ08493 712 aa17.47■□□□□ 0.39
AC007424.1-202ENST00000550548 RANGAP1P46060 587 aaPredicted RBP17.45■□□□□ 0.38
AC007424.1-202ENST00000550548 GLIPR1L2Q4G1C9 344 aa17.44■□□□□ 0.38
AC007424.1-202ENST00000550548 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
AC007424.1-202ENST00000550548 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
AC007424.1-202ENST00000550548 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
AC007424.1-202ENST00000550548 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
AC007424.1-202ENST00000550548 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
AC007424.1-202ENST00000550548 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
AC007424.1-202ENST00000550548 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
AC007424.1-202ENST00000550548 FGD1P98174 961 aa17.33■□□□□ 0.36
AC007424.1-202ENST00000550548 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
AC007424.1-202ENST00000550548 ITGAEP38570 1179 aa17.26■□□□□ 0.35
AC007424.1-202ENST00000550548 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
AC007424.1-202ENST00000550548 NBR1Q14596 966 aa17.24■□□□□ 0.35
AC007424.1-202ENST00000550548 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
AC007424.1-202ENST00000550548 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
AC007424.1-202ENST00000550548 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
AC007424.1-202ENST00000550548 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
AC007424.1-202ENST00000550548 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
AC007424.1-202ENST00000550548 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
AC007424.1-202ENST00000550548 AAMPQ13685 434 aa17.17■□□□□ 0.34
AC007424.1-202ENST00000550548 A0A0U1RQG5 324 aaPredicted RBP17.14■□□□□ 0.33
AC007424.1-202ENST00000550548 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.33
AC007424.1-202ENST00000550548 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
AC007424.1-202ENST00000550548 RBM10P98175 930 aaKnown RBP17.07■□□□□ 0.32
AC007424.1-202ENST00000550548 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
AC007424.1-202ENST00000550548 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
AC007424.1-202ENST00000550548 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
AC007424.1-202ENST00000550548 CCER2I3L3R5 266 aa17.01■□□□□ 0.31
AC007424.1-202ENST00000550548 KCNH8Q96L42 1107 aa17■□□□□ 0.31
AC007424.1-202ENST00000550548 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
AC007424.1-202ENST00000550548 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
AC007424.1-202ENST00000550548 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
AC007424.1-202ENST00000550548 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
AC007424.1-202ENST00000550548 RRP9O43818 475 aaKnown RBP16.9■□□□□ 0.3
AC007424.1-202ENST00000550548 NEFMP07197 916 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms