RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
RAB5C-207ENST00000550504 PTCH1Q13635 1447 aa14.4□□□□□ -0.1
RAB5C-207ENST00000550504 SIRT1Q96EB6 747 aa14.39□□□□□ -0.11
RAB5C-207ENST00000550504 RBM33Q96EV2 1170 aaKnown RBP14.39□□□□□ -0.11
RAB5C-207ENST00000550504 STRCP1A6NGW2 1772 aa14.39□□□□□ -0.11
RAB5C-207ENST00000550504 ZNF335Q9H4Z2 1342 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-207ENST00000550504 C11orf95C9JLR9 678 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-207ENST00000550504 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-207ENST00000550504 POLR3GLQ9BT43 218 aa14.37□□□□□ -0.11
RAB5C-207ENST00000550504 SBNO2Q9Y2G9 1366 aa14.36□□□□□ -0.11
RAB5C-207ENST00000550504 TMF1P82094 1093 aa14.36□□□□□ -0.11
RAB5C-207ENST00000550504 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
RAB5C-207ENST00000550504 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
RAB5C-207ENST00000550504 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
RAB5C-207ENST00000550504 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
RAB5C-207ENST00000550504 TULP4Q9NRJ4 1543 aa14.33□□□□□ -0.12
RAB5C-207ENST00000550504 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
RAB5C-207ENST00000550504 WASHC2AQ641Q2 1341 aa14.33□□□□□ -0.12
RAB5C-207ENST00000550504 EVC2Q86UK5 1308 aa14.33□□□□□ -0.12
RAB5C-207ENST00000550504 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
RAB5C-207ENST00000550504 TMEM94Q12767 1356 aa14.32□□□□□ -0.12
RAB5C-207ENST00000550504 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
RAB5C-207ENST00000550504 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
RAB5C-207ENST00000550504 CABP2Q9NPB3 220 aa14.31□□□□□ -0.12
RAB5C-207ENST00000550504 NALCNQ8IZF0 1738 aa14.31□□□□□ -0.12
RAB5C-207ENST00000550504 WASLO00401 505 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-207ENST00000550504 CDCA8Q53HL2 280 aa14.3□□□□□ -0.12
RAB5C-207ENST00000550504 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
RAB5C-207ENST00000550504 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
RAB5C-207ENST00000550504 ADGRB2O60241 1585 aa14.3□□□□□ -0.12
RAB5C-207ENST00000550504 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
RAB5C-207ENST00000550504 XIRP1Q702N8 1843 aaKnown RBP14.27□□□□□ -0.13
RAB5C-207ENST00000550504 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
RAB5C-207ENST00000550504 CDC42BPGQ6DT37 1551 aa14.26□□□□□ -0.13
RAB5C-207ENST00000550504 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
RAB5C-207ENST00000550504 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
RAB5C-207ENST00000550504 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
RAB5C-207ENST00000550504 MSH6P52701 1360 aa14.24□□□□□ -0.13
RAB5C-207ENST00000550504 NUDT16Q96DE0 195 aaKnown RBP14.24□□□□□ -0.13
RAB5C-207ENST00000550504 PUS7Q96PZ0 661 aaKnown RBP14.24□□□□□ -0.13
RAB5C-207ENST00000550504 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
RAB5C-207ENST00000550504 ATAD2Q6PL18 1390 aa14.23□□□□□ -0.13
RAB5C-207ENST00000550504 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
RAB5C-207ENST00000550504 ATF3P18847 181 aa14.23□□□□□ -0.13
RAB5C-207ENST00000550504 MYOM1P52179 1685 aa14.23□□□□□ -0.13
RAB5C-207ENST00000550504 SLC12A5Q9H2X9 1139 aa14.22□□□□□ -0.13
RAB5C-207ENST00000550504 ATP7BP35670 1465 aa14.22□□□□□ -0.13
RAB5C-207ENST00000550504 USP32Q8NFA0 1604 aa14.22□□□□□ -0.13
RAB5C-207ENST00000550504 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
RAB5C-207ENST00000550504 RGPD8O14715 1765 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-207ENST00000550504 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
RAB5C-207ENST00000550504 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
RAB5C-207ENST00000550504 DCCP43146 1447 aa14.2□□□□□ -0.14
RAB5C-207ENST00000550504 PPIP5K1Q6PFW1 1433 aa14.2□□□□□ -0.14
RAB5C-207ENST00000550504 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
RAB5C-207ENST00000550504 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-207ENST00000550504 UBAP1LF5GYI3 381 aa14.19□□□□□ -0.14
RAB5C-207ENST00000550504 PANK3Q9H999 370 aa14.19□□□□□ -0.14
RAB5C-207ENST00000550504 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
RAB5C-207ENST00000550504 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
RAB5C-207ENST00000550504 MST1RQ04912 1400 aa14.17□□□□□ -0.14
RAB5C-207ENST00000550504 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
RAB5C-207ENST00000550504 ITSN1Q15811 1721 aa14.17□□□□□ -0.14
RAB5C-207ENST00000550504 NINLQ9Y2I6 1382 aa14.17□□□□□ -0.14
RAB5C-207ENST00000550504 C1orf167Q5SNV9 1468 aa14.17□□□□□ -0.14
RAB5C-207ENST00000550504 ORAI2Q96SN7 254 aa14.16□□□□□ -0.14
RAB5C-207ENST00000550504 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
RAB5C-207ENST00000550504 A0A1W2PP64 1363 aa14.15□□□□□ -0.14
RAB5C-207ENST00000550504 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
RAB5C-207ENST00000550504 DIEXFQ68CQ4 756 aaKnown RBP14.15□□□□□ -0.14
RAB5C-207ENST00000550504 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
RAB5C-207ENST00000550504 TERF2IPQ9NYB0 399 aa14.15□□□□□ -0.14
RAB5C-207ENST00000550504 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
RAB5C-207ENST00000550504 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
RAB5C-207ENST00000550504 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
RAB5C-207ENST00000550504 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
RAB5C-207ENST00000550504 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
RAB5C-207ENST00000550504 ACEP12821 1306 aa14.14□□□□□ -0.15
RAB5C-207ENST00000550504 CARD14Q9BXL6 1004 aa14.13□□□□□ -0.15
RAB5C-207ENST00000550504 KTN1Q86UP2 1357 aaKnown RBP14.12□□□□□ -0.15
RAB5C-207ENST00000550504 HSPA1LP34931 641 aa14.12□□□□□ -0.15
RAB5C-207ENST00000550504 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
RAB5C-207ENST00000550504 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
RAB5C-207ENST00000550504 KNSTRNQ9Y448 316 aa14.11□□□□□ -0.15
RAB5C-207ENST00000550504 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
RAB5C-207ENST00000550504 POLR3AO14802 1390 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-207ENST00000550504 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-207ENST00000550504 FOXO3O43524 673 aa14.1□□□□□ -0.15
RAB5C-207ENST00000550504 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
RAB5C-207ENST00000550504 XPCQ01831 940 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-207ENST00000550504 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
RAB5C-207ENST00000550504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB5C-207ENST00000550504 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
RAB5C-207ENST00000550504 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-207ENST00000550504 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
RAB5C-207ENST00000550504 USP6P35125 1406 aa14.08□□□□□ -0.15
RAB5C-207ENST00000550504 PSME1Q06323 249 aa14.08□□□□□ -0.16
RAB5C-207ENST00000550504 TOM1O60784 492 aa14.07□□□□□ -0.16
RAB5C-207ENST00000550504 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
RAB5C-207ENST00000550504 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms