RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 IFT172Q9UG01 1749 aa23.12■■□□□ 1.29
RAB5C-205ENST00000550013 CCDC144AA2RUR9 1427 aa23.11■■□□□ 1.29
RAB5C-205ENST00000550013 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
RAB5C-205ENST00000550013 SPATA31E1Q6ZUB1 1445 aa23.1■■□□□ 1.29
RAB5C-205ENST00000550013 COL22A1Q8NFW1 1626 aaPredicted RBP23.09■■□□□ 1.29
RAB5C-205ENST00000550013 STK26Q9P289 416 aa23.09■■□□□ 1.29
RAB5C-205ENST00000550013 ESCO1Q5FWF5 840 aa23.07■■□□□ 1.28
RAB5C-205ENST00000550013 PXDNQ92626 1479 aa23.06■■□□□ 1.28
RAB5C-205ENST00000550013 WAPLQ7Z5K2 1190 aa23.06■■□□□ 1.28
RAB5C-205ENST00000550013 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
RAB5C-205ENST00000550013 TECPR2O15040 1411 aa23.06■■□□□ 1.28
RAB5C-205ENST00000550013 USP21Q9UK80 565 aa23.05■■□□□ 1.28
RAB5C-205ENST00000550013 NPHP3Q7Z494 1330 aa23.05■■□□□ 1.28
RAB5C-205ENST00000550013 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
RAB5C-205ENST00000550013 MYOM2P54296 1465 aa23.05■■□□□ 1.28
RAB5C-205ENST00000550013 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
RAB5C-205ENST00000550013 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
RAB5C-205ENST00000550013 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
RAB5C-205ENST00000550013 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
RAB5C-205ENST00000550013 TMEM132EQ6IEE7 984 aa23.04■■□□□ 1.28
RAB5C-205ENST00000550013 PLEKHH1Q9ULM0 1364 aa23.03■■□□□ 1.28
RAB5C-205ENST00000550013 FOXO3O43524 673 aa23.02■■□□□ 1.28
RAB5C-205ENST00000550013 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
RAB5C-205ENST00000550013 FNBP4Q8N3X1 1017 aaPredicted RBP23.01■■□□□ 1.27
RAB5C-205ENST00000550013 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
RAB5C-205ENST00000550013 ABCC11Q96J66 1382 aa23.01■■□□□ 1.27
RAB5C-205ENST00000550013 FMN2Q9NZ56 1722 aa23■■□□□ 1.27
RAB5C-205ENST00000550013 TRPC5Q9UL62 973 aaPredicted RBP23■■□□□ 1.27
RAB5C-205ENST00000550013 ATRNO75882 1429 aa22.99■■□□□ 1.27
RAB5C-205ENST00000550013 YTHDC2Q9H6S0 1430 aaKnown RBP22.98■■□□□ 1.27
RAB5C-205ENST00000550013 BCL9LQ86UU0 1499 aa22.96■■□□□ 1.27
RAB5C-205ENST00000550013 ATAD2Q6PL18 1390 aa22.95■■□□□ 1.26
RAB5C-205ENST00000550013 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
RAB5C-205ENST00000550013 KIF1AQ12756 1690 aa22.93■■□□□ 1.26
RAB5C-205ENST00000550013 EP400Q96L91 3159 aa22.91■■□□□ 1.26
RAB5C-205ENST00000550013 SPATA31A3Q5VYP0 1347 aa22.9■■□□□ 1.26
RAB5C-205ENST00000550013 C14orf93Q9H972 538 aaKnown RBP22.9■■□□□ 1.26
RAB5C-205ENST00000550013 NRXN1Q9ULB1 1477 aa22.9■■□□□ 1.26
RAB5C-205ENST00000550013 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.25
RAB5C-205ENST00000550013 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
RAB5C-205ENST00000550013 SIRT1Q96EB6 747 aa22.88■■□□□ 1.25
RAB5C-205ENST00000550013 KRT28Q7Z3Y7 464 aa22.87■■□□□ 1.25
RAB5C-205ENST00000550013 GJD4Q96KN9 370 aaPredicted RBP22.86■■□□□ 1.25
RAB5C-205ENST00000550013 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
RAB5C-205ENST00000550013 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
RAB5C-205ENST00000550013 SAFB2Q14151 953 aaKnown RBP eCLIP22.85■■□□□ 1.25
RAB5C-205ENST00000550013 PHF8Q9UPP1 1060 aa22.85■■□□□ 1.25
RAB5C-205ENST00000550013 SLIT2O94813 1529 aa22.85■■□□□ 1.25
RAB5C-205ENST00000550013 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
RAB5C-205ENST00000550013 GLI3P10071 1580 aa22.84■■□□□ 1.25
RAB5C-205ENST00000550013 TNS3Q68CZ2 1445 aa22.83■■□□□ 1.25
RAB5C-205ENST00000550013 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
RAB5C-205ENST00000550013 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
RAB5C-205ENST00000550013 SRCAPQ6ZRS2 3230 aa22.82■■□□□ 1.24
RAB5C-205ENST00000550013 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
RAB5C-205ENST00000550013 PLEKHG5O94827 1062 aa22.81■■□□□ 1.24
RAB5C-205ENST00000550013 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
RAB5C-205ENST00000550013 ABCA3Q99758 1704 aa22.8■■□□□ 1.24
RAB5C-205ENST00000550013 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
RAB5C-205ENST00000550013 DLC1Q96QB1 1528 aa22.79■■□□□ 1.24
RAB5C-205ENST00000550013 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
RAB5C-205ENST00000550013 PLCH1Q4KWH8 1693 aa22.78■■□□□ 1.24
RAB5C-205ENST00000550013 HAP1P54257 671 aaPredicted RBP22.78■■□□□ 1.24
RAB5C-205ENST00000550013 PSME1Q06323 249 aa22.78■■□□□ 1.24
RAB5C-205ENST00000550013 ADGRB1O14514 1584 aa22.77■■□□□ 1.24
RAB5C-205ENST00000550013 POGKQ9P215 609 aa22.77■■□□□ 1.24
RAB5C-205ENST00000550013 SBNO1A3KN83 1393 aa22.76■■□□□ 1.23
RAB5C-205ENST00000550013 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
RAB5C-205ENST00000550013 ADGRB2O60241 1585 aa22.76■■□□□ 1.23
RAB5C-205ENST00000550013 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
RAB5C-205ENST00000550013 ANKARQ7Z5J8 1434 aa22.74■■□□□ 1.23
RAB5C-205ENST00000550013 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
RAB5C-205ENST00000550013 CCDC125Q86Z20 511 aa22.74■■□□□ 1.23
RAB5C-205ENST00000550013 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
RAB5C-205ENST00000550013 ZRANB1Q9UGI0 708 aa22.73■■□□□ 1.23
RAB5C-205ENST00000550013 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
RAB5C-205ENST00000550013 ARHGEF10O15013 1369 aa22.73■■□□□ 1.23
RAB5C-205ENST00000550013 TRPM3Q9HCF6 1732 aaPredicted RBP22.72■■□□□ 1.23
RAB5C-205ENST00000550013 VPS72Q15906 364 aa22.71■■□□□ 1.23
RAB5C-205ENST00000550013 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
RAB5C-205ENST00000550013 MINK1Q8N4C8 1332 aaPredicted RBP22.7■■□□□ 1.22
RAB5C-205ENST00000550013 SEPT12Q8IYM1 358 aa22.69■■□□□ 1.22
RAB5C-205ENST00000550013 CCDC9Q9Y3X0 531 aaKnown RBP22.69■■□□□ 1.22
RAB5C-205ENST00000550013 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
RAB5C-205ENST00000550013 PRR36Q9H6K5 1346 aa22.68■■□□□ 1.22
RAB5C-205ENST00000550013 FAM83GA6ND36 823 aa22.68■■□□□ 1.22
RAB5C-205ENST00000550013 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
RAB5C-205ENST00000550013 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
RAB5C-205ENST00000550013 NRAPQ86VF7 1730 aa22.67■■□□□ 1.22
RAB5C-205ENST00000550013 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
RAB5C-205ENST00000550013 ONECUT3O60422 494 aaPredicted RBP22.64■■□□□ 1.21
RAB5C-205ENST00000550013 DEFB132Q7Z7B7 95 aa22.64■■□□□ 1.21
RAB5C-205ENST00000550013 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
RAB5C-205ENST00000550013 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
RAB5C-205ENST00000550013 WASLO00401 505 aaPredicted RBP22.63■■□□□ 1.21
RAB5C-205ENST00000550013 ARHGEF28Q8N1W1 1705 aaKnown RBP22.62■■□□□ 1.21
RAB5C-205ENST00000550013 COL14A1Q05707 1796 aaKnown RBP22.62■■□□□ 1.21
RAB5C-205ENST00000550013 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
RAB5C-205ENST00000550013 KRT27Q7Z3Y8 459 aa22.61■■□□□ 1.21
RAB5C-205ENST00000550013 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 566 ms