RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RGS12O14924 1447 aa20.29■□□□□ 0.84
TROAP-211ENST00000549891 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
TROAP-211ENST00000549891 NPHP3Q7Z494 1330 aa20.28■□□□□ 0.84
TROAP-211ENST00000549891 FOXD1Q16676 465 aa20.28■□□□□ 0.84
TROAP-211ENST00000549891 ESCO1Q5FWF5 840 aa20.27■□□□□ 0.84
TROAP-211ENST00000549891 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.83
TROAP-211ENST00000549891 TECPR2O15040 1411 aa20.27■□□□□ 0.83
TROAP-211ENST00000549891 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.83
TROAP-211ENST00000549891 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
TROAP-211ENST00000549891 USP21Q9UK80 565 aa20.26■□□□□ 0.83
TROAP-211ENST00000549891 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
TROAP-211ENST00000549891 MARF1Q9Y4F3 1742 aaKnown RBP20.25■□□□□ 0.83
TROAP-211ENST00000549891 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
TROAP-211ENST00000549891 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
TROAP-211ENST00000549891 ACIN1Q9UKV3 1341 aaKnown RBP20.25■□□□□ 0.83
TROAP-211ENST00000549891 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
TROAP-211ENST00000549891 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
TROAP-211ENST00000549891 STK26Q9P289 416 aa20.23■□□□□ 0.83
TROAP-211ENST00000549891 PXDNQ92626 1479 aa20.23■□□□□ 0.83
TROAP-211ENST00000549891 ABCC11Q96J66 1382 aa20.22■□□□□ 0.83
TROAP-211ENST00000549891 PIK3C2GO75747 1445 aa20.21■□□□□ 0.83
TROAP-211ENST00000549891 FOXO3O43524 673 aa20.21■□□□□ 0.83
TROAP-211ENST00000549891 MYOM2P54296 1465 aa20.21■□□□□ 0.83
TROAP-211ENST00000549891 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
TROAP-211ENST00000549891 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
TROAP-211ENST00000549891 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
TROAP-211ENST00000549891 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
TROAP-211ENST00000549891 ATRNO75882 1429 aa20.18■□□□□ 0.82
TROAP-211ENST00000549891 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
TROAP-211ENST00000549891 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
TROAP-211ENST00000549891 NUTM2FA1L443 756 aa20.16■□□□□ 0.82
TROAP-211ENST00000549891 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
TROAP-211ENST00000549891 SIRT1Q96EB6 747 aa20.15■□□□□ 0.82
TROAP-211ENST00000549891 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.15■□□□□ 0.82
TROAP-211ENST00000549891 PLEKHH1Q9ULM0 1364 aa20.14■□□□□ 0.81
TROAP-211ENST00000549891 BCL9LQ86UU0 1499 aa20.13■□□□□ 0.81
TROAP-211ENST00000549891 RGPD8O14715 1765 aaPredicted RBP20.13■□□□□ 0.81
TROAP-211ENST00000549891 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
TROAP-211ENST00000549891 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
TROAP-211ENST00000549891 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
TROAP-211ENST00000549891 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
TROAP-211ENST00000549891 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
TROAP-211ENST00000549891 PSME1Q06323 249 aa20.09■□□□□ 0.81
TROAP-211ENST00000549891 KRT28Q7Z3Y7 464 aa20.09■□□□□ 0.81
TROAP-211ENST00000549891 CCDC125Q86Z20 511 aa20.08■□□□□ 0.81
TROAP-211ENST00000549891 EP400Q96L91 3159 aa20.08■□□□□ 0.8
TROAP-211ENST00000549891 USP32Q8NFA0 1604 aa20.08■□□□□ 0.8
TROAP-211ENST00000549891 PHF8Q9UPP1 1060 aa20.07■□□□□ 0.8
TROAP-211ENST00000549891 HAP1P54257 671 aaPredicted RBP20.06■□□□□ 0.8
TROAP-211ENST00000549891 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
TROAP-211ENST00000549891 UNC5CLQ8IV45 518 aa20.06■□□□□ 0.8
TROAP-211ENST00000549891 SLIT2O94813 1529 aa20.06■□□□□ 0.8
TROAP-211ENST00000549891 TNS3Q68CZ2 1445 aa20.05■□□□□ 0.8
TROAP-211ENST00000549891 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
TROAP-211ENST00000549891 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
TROAP-211ENST00000549891 NWD2Q9ULI1 1742 aa20.03■□□□□ 0.8
TROAP-211ENST00000549891 POGKQ9P215 609 aa20.03■□□□□ 0.8
TROAP-211ENST00000549891 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
TROAP-211ENST00000549891 SBNO1A3KN83 1393 aa20.02■□□□□ 0.8
TROAP-211ENST00000549891 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
TROAP-211ENST00000549891 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
TROAP-211ENST00000549891 GLI3P10071 1580 aa20.02■□□□□ 0.8
TROAP-211ENST00000549891 SAFB2Q14151 953 aaKnown RBP eCLIP20.01■□□□□ 0.79
TROAP-211ENST00000549891 ABCA3Q99758 1704 aa20.01■□□□□ 0.79
TROAP-211ENST00000549891 ANKARQ7Z5J8 1434 aa20.01■□□□□ 0.79
TROAP-211ENST00000549891 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
TROAP-211ENST00000549891 ADGRB2O60241 1585 aa20■□□□□ 0.79
TROAP-211ENST00000549891 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
TROAP-211ENST00000549891 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
TROAP-211ENST00000549891 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
TROAP-211ENST00000549891 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
TROAP-211ENST00000549891 ADGRB1O14514 1584 aa19.96■□□□□ 0.79
TROAP-211ENST00000549891 VPS72Q15906 364 aa19.96■□□□□ 0.79
TROAP-211ENST00000549891 CABLES1Q8TDN4 633 aa19.96■□□□□ 0.79
TROAP-211ENST00000549891 BLMP54132 1417 aaPredicted RBP19.95■□□□□ 0.78
TROAP-211ENST00000549891 PMFBP1Q8TBY8 1022 aa19.95■□□□□ 0.78
TROAP-211ENST00000549891 STAC3Q96MF2 364 aa19.95■□□□□ 0.78
TROAP-211ENST00000549891 SRCAPQ6ZRS2 3230 aa19.95■□□□□ 0.78
TROAP-211ENST00000549891 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
TROAP-211ENST00000549891 TRAK1Q9UPV9 953 aa19.94■□□□□ 0.78
TROAP-211ENST00000549891 CCDC9Q9Y3X0 531 aaKnown RBP19.94■□□□□ 0.78
TROAP-211ENST00000549891 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
TROAP-211ENST00000549891 TRPM3Q9HCF6 1732 aaPredicted RBP19.93■□□□□ 0.78
TROAP-211ENST00000549891 SEPT12Q8IYM1 358 aa19.93■□□□□ 0.78
TROAP-211ENST00000549891 SF3B2Q13435 895 aaKnown RBP19.92■□□□□ 0.78
TROAP-211ENST00000549891 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
TROAP-211ENST00000549891 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
TROAP-211ENST00000549891 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
TROAP-211ENST00000549891 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
TROAP-211ENST00000549891 ONECUT3O60422 494 aaPredicted RBP19.9■□□□□ 0.78
TROAP-211ENST00000549891 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
TROAP-211ENST00000549891 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
TROAP-211ENST00000549891 ITSN1Q15811 1721 aa19.9■□□□□ 0.78
TROAP-211ENST00000549891 COL14A1Q05707 1796 aaKnown RBP19.9■□□□□ 0.78
TROAP-211ENST00000549891 FAM83GA6ND36 823 aa19.89■□□□□ 0.77
TROAP-211ENST00000549891 NRAPQ86VF7 1730 aa19.89■□□□□ 0.77
TROAP-211ENST00000549891 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
TROAP-211ENST00000549891 KRT27Q7Z3Y8 459 aa19.88■□□□□ 0.77
TROAP-211ENST00000549891 ARHGEF28Q8N1W1 1705 aaKnown RBP19.87■□□□□ 0.77
TROAP-211ENST00000549891 A0A0G2JS52 829 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms