RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 LAMC1P11047 1609 aa23.27■■□□□ 1.32
CDK4-206ENST00000549606 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
CDK4-206ENST00000549606 CDC42BPGQ6DT37 1551 aa23.26■■□□□ 1.31
CDK4-206ENST00000549606 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
CDK4-206ENST00000549606 TECPR2O15040 1411 aa23.25■■□□□ 1.31
CDK4-206ENST00000549606 AFF2P51816 1311 aa23.24■■□□□ 1.31
CDK4-206ENST00000549606 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
CDK4-206ENST00000549606 ABCC11Q96J66 1382 aa23.24■■□□□ 1.31
CDK4-206ENST00000549606 NUTM2FA1L443 756 aa23.23■■□□□ 1.31
CDK4-206ENST00000549606 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
CDK4-206ENST00000549606 YTHDC2Q9H6S0 1430 aaKnown RBP23.23■■□□□ 1.31
CDK4-206ENST00000549606 C8orf37Q96NL8 207 aa23.22■■□□□ 1.31
CDK4-206ENST00000549606 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
CDK4-206ENST00000549606 CFAP70Q5T0N1 1121 aa23.21■■□□□ 1.31
CDK4-206ENST00000549606 MYOM2P54296 1465 aa23.2■■□□□ 1.3
CDK4-206ENST00000549606 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
CDK4-206ENST00000549606 RXRBP28702 533 aa23.2■■□□□ 1.3
CDK4-206ENST00000549606 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
CDK4-206ENST00000549606 NPHP3Q7Z494 1330 aa23.18■■□□□ 1.3
CDK4-206ENST00000549606 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
CDK4-206ENST00000549606 FOXO3O43524 673 aa23.17■■□□□ 1.3
CDK4-206ENST00000549606 XPCQ01831 940 aaPredicted RBP23.16■■□□□ 1.3
CDK4-206ENST00000549606 NGLY1Q96IV0 654 aa23.16■■□□□ 1.3
CDK4-206ENST00000549606 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
CDK4-206ENST00000549606 SIRT1Q96EB6 747 aa23.15■■□□□ 1.3
CDK4-206ENST00000549606 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.29
CDK4-206ENST00000549606 PXDNQ92626 1479 aa23.13■■□□□ 1.29
CDK4-206ENST00000549606 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
CDK4-206ENST00000549606 COL22A1Q8NFW1 1626 aaPredicted RBP23.12■■□□□ 1.29
CDK4-206ENST00000549606 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDK4-206ENST00000549606 RGPD8O14715 1765 aaPredicted RBP23.12■■□□□ 1.29
CDK4-206ENST00000549606 HRCP23327 699 aa23.11■■□□□ 1.29
CDK4-206ENST00000549606 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
CDK4-206ENST00000549606 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
CDK4-206ENST00000549606 POGKQ9P215 609 aa23.09■■□□□ 1.29
CDK4-206ENST00000549606 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
CDK4-206ENST00000549606 KIF1AQ12756 1690 aa23.09■■□□□ 1.29
CDK4-206ENST00000549606 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
CDK4-206ENST00000549606 USP21Q9UK80 565 aa23.07■■□□□ 1.28
CDK4-206ENST00000549606 UPF1Q92900 1129 aaKnown RBP eCLIP23.05■■□□□ 1.28
CDK4-206ENST00000549606 TRAK1Q9UPV9 953 aa23.05■■□□□ 1.28
CDK4-206ENST00000549606 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
CDK4-206ENST00000549606 DLC1Q96QB1 1528 aa23.04■■□□□ 1.28
CDK4-206ENST00000549606 KRT28Q7Z3Y7 464 aa23.04■■□□□ 1.28
CDK4-206ENST00000549606 PHF8Q9UPP1 1060 aa23.04■■□□□ 1.28
CDK4-206ENST00000549606 ADGRB1O14514 1584 aa23.04■■□□□ 1.28
CDK4-206ENST00000549606 RGS12O14924 1447 aa23.02■■□□□ 1.28
CDK4-206ENST00000549606 FNBP4Q8N3X1 1017 aaPredicted RBP23.02■■□□□ 1.28
CDK4-206ENST00000549606 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
CDK4-206ENST00000549606 TRPC5Q9UL62 973 aaPredicted RBP23.01■■□□□ 1.27
CDK4-206ENST00000549606 STAC3Q96MF2 364 aa23■■□□□ 1.27
CDK4-206ENST00000549606 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
CDK4-206ENST00000549606 PSME1Q06323 249 aa22.99■■□□□ 1.27
CDK4-206ENST00000549606 USP32Q8NFA0 1604 aa22.98■■□□□ 1.27
CDK4-206ENST00000549606 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
CDK4-206ENST00000549606 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
CDK4-206ENST00000549606 PMFBP1Q8TBY8 1022 aa22.97■■□□□ 1.27
CDK4-206ENST00000549606 PLEKHG5O94827 1062 aa22.96■■□□□ 1.27
CDK4-206ENST00000549606 ATRNO75882 1429 aa22.95■■□□□ 1.26
CDK4-206ENST00000549606 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
CDK4-206ENST00000549606 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
CDK4-206ENST00000549606 BCL9LQ86UU0 1499 aa22.94■■□□□ 1.26
CDK4-206ENST00000549606 TNS3Q68CZ2 1445 aa22.94■■□□□ 1.26
CDK4-206ENST00000549606 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
CDK4-206ENST00000549606 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
CDK4-206ENST00000549606 ARHGEF28Q8N1W1 1705 aaKnown RBP22.91■■□□□ 1.26
CDK4-206ENST00000549606 SBNO1A3KN83 1393 aa22.9■■□□□ 1.26
CDK4-206ENST00000549606 WASLO00401 505 aaPredicted RBP22.9■■□□□ 1.26
CDK4-206ENST00000549606 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
CDK4-206ENST00000549606 TULP4Q9NRJ4 1543 aa22.89■■□□□ 1.26
CDK4-206ENST00000549606 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
CDK4-206ENST00000549606 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
CDK4-206ENST00000549606 GJD4Q96KN9 370 aaPredicted RBP22.88■■□□□ 1.25
CDK4-206ENST00000549606 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
CDK4-206ENST00000549606 UNC5CLQ8IV45 518 aa22.87■■□□□ 1.25
CDK4-206ENST00000549606 ABCA3Q99758 1704 aa22.87■■□□□ 1.25
CDK4-206ENST00000549606 SLIT2O94813 1529 aa22.87■■□□□ 1.25
CDK4-206ENST00000549606 GPRASP1Q5JY77 1395 aa22.86■■□□□ 1.25
CDK4-206ENST00000549606 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
CDK4-206ENST00000549606 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
CDK4-206ENST00000549606 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
CDK4-206ENST00000549606 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
CDK4-206ENST00000549606 PLCH1Q4KWH8 1693 aa22.83■■□□□ 1.24
CDK4-206ENST00000549606 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
CDK4-206ENST00000549606 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
CDK4-206ENST00000549606 PAK3O75914 559 aaPredicted RBP22.81■■□□□ 1.24
CDK4-206ENST00000549606 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
CDK4-206ENST00000549606 GLI3P10071 1580 aa22.8■■□□□ 1.24
CDK4-206ENST00000549606 RALGAPBQ86X10 1494 aa22.8■■□□□ 1.24
CDK4-206ENST00000549606 NBPF1Q3BBV0 1214 aa22.8■■□□□ 1.24
CDK4-206ENST00000549606 NWD2Q9ULI1 1742 aa22.79■■□□□ 1.24
CDK4-206ENST00000549606 CDK19Q9BWU1 502 aa22.79■■□□□ 1.24
CDK4-206ENST00000549606 CCDC9Q9Y3X0 531 aaKnown RBP22.79■■□□□ 1.24
CDK4-206ENST00000549606 FAM83GA6ND36 823 aa22.78■■□□□ 1.24
CDK4-206ENST00000549606 ATP7BP35670 1465 aa22.78■■□□□ 1.24
CDK4-206ENST00000549606 VPS72Q15906 364 aa22.76■■□□□ 1.23
CDK4-206ENST00000549606 EP400Q96L91 3159 aa22.76■■□□□ 1.23
CDK4-206ENST00000549606 BRWD3Q6RI45 1802 aa22.74■■□□□ 1.23
CDK4-206ENST00000549606 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
CDK4-206ENST00000549606 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms