RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 NXF1Q9UBU9 619 aaKnown RBP10□□□□□ -0.81
SNRPF-202ENST00000549580 SLC27A5Q9Y2P5 690 aa10□□□□□ -0.81
SNRPF-202ENST00000549580 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
SNRPF-202ENST00000549580 TRIM32Q13049 653 aa9.99□□□□□ -0.81
SNRPF-202ENST00000549580 SUZ12Q15022 739 aaKnown RBP9.99□□□□□ -0.81
SNRPF-202ENST00000549580 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
SNRPF-202ENST00000549580 BRICD5Q6PL45 260 aa9.98□□□□□ -0.81
SNRPF-202ENST00000549580 ARHGEF1Q92888 912 aaKnown RBP9.98□□□□□ -0.81
SNRPF-202ENST00000549580 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
SNRPF-202ENST00000549580 OATP04181 439 aa9.97□□□□□ -0.81
SNRPF-202ENST00000549580 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
SNRPF-202ENST00000549580 METTL3Q86U44 580 aaKnown RBP9.97□□□□□ -0.81
SNRPF-202ENST00000549580 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
SNRPF-202ENST00000549580 FCHSD2O94868 740 aa9.95□□□□□ -0.82
SNRPF-202ENST00000549580 IRF7Q92985 503 aa9.95□□□□□ -0.82
SNRPF-202ENST00000549580 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
SNRPF-202ENST00000549580 RDH13Q8NBN7 331 aa9.93□□□□□ -0.82
SNRPF-202ENST00000549580 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
SNRPF-202ENST00000549580 H3BM21 787 aa9.92□□□□□ -0.82
SNRPF-202ENST00000549580 ERBB4Q15303 1308 aa9.91□□□□□ -0.82
SNRPF-202ENST00000549580 FECHP22830 423 aa9.91□□□□□ -0.82
SNRPF-202ENST00000549580 MMP16P51512 607 aa9.91□□□□□ -0.82
SNRPF-202ENST00000549580 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
SNRPF-202ENST00000549580 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
SNRPF-202ENST00000549580 GCGRP47871 477 aa9.9□□□□□ -0.82
SNRPF-202ENST00000549580 SEMA3EO15041 775 aa9.89□□□□□ -0.83
SNRPF-202ENST00000549580 VEGFBP49765 207 aa9.89□□□□□ -0.83
SNRPF-202ENST00000549580 TRIM46Q7Z4K8 759 aa9.89□□□□□ -0.83
SNRPF-202ENST00000549580 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
SNRPF-202ENST00000549580 SKOR1P84550 965 aa9.88□□□□□ -0.83
SNRPF-202ENST00000549580 DDX11L8A8MPP1 907 aa9.87□□□□□ -0.83
SNRPF-202ENST00000549580 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
SNRPF-202ENST00000549580 BMP1P13497 986 aa9.86□□□□□ -0.83
SNRPF-202ENST00000549580 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
SNRPF-202ENST00000549580 GSK3AP49840 483 aa9.84□□□□□ -0.83
SNRPF-202ENST00000549580 WNT7BP56706 349 aa9.84□□□□□ -0.83
SNRPF-202ENST00000549580 HIC1Q14526 733 aa9.83□□□□□ -0.84
SNRPF-202ENST00000549580 ALDH1A1P00352 501 aa9.82□□□□□ -0.84
SNRPF-202ENST00000549580 RBM26Q5T8P6 1007 aaKnown RBP9.82□□□□□ -0.84
SNRPF-202ENST00000549580 KCNMA1Q12791 1236 aa9.8□□□□□ -0.84
SNRPF-202ENST00000549580 SULF1Q8IWU6 871 aa9.8□□□□□ -0.84
SNRPF-202ENST00000549580 SIAH2O43255 324 aa9.79□□□□□ -0.84
SNRPF-202ENST00000549580 Q3C1V9 767 aa9.79□□□□□ -0.84
SNRPF-202ENST00000549580 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
SNRPF-202ENST00000549580 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
SNRPF-202ENST00000549580 CAPN5O15484 640 aaPredicted RBP9.77□□□□□ -0.85
SNRPF-202ENST00000549580 GRIPAP1Q4V328 841 aa9.77□□□□□ -0.85
SNRPF-202ENST00000549580 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
SNRPF-202ENST00000549580 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
SNRPF-202ENST00000549580 GPR37O15354 613 aa9.74□□□□□ -0.85
SNRPF-202ENST00000549580 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
SNRPF-202ENST00000549580 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
SNRPF-202ENST00000549580 GNPATO15228 680 aa9.73□□□□□ -0.85
SNRPF-202ENST00000549580 HAP1P54257 671 aaPredicted RBP9.71□□□□□ -0.86
SNRPF-202ENST00000549580 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
SNRPF-202ENST00000549580 WASF2Q9Y6W5 498 aa9.7□□□□□ -0.86
SNRPF-202ENST00000549580 EHBP1Q8NDI1 1231 aa9.69□□□□□ -0.86
SNRPF-202ENST00000549580 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
SNRPF-202ENST00000549580 CD46P15529 392 aa9.67□□□□□ -0.86
SNRPF-202ENST00000549580 PTCRAQ6ISU1 281 aaPredicted RBP9.66□□□□□ -0.86
SNRPF-202ENST00000549580 HLA-CQ95604 372 aa9.66□□□□□ -0.86
SNRPF-202ENST00000549580 JUNDP17535 347 aa9.65□□□□□ -0.86
SNRPF-202ENST00000549580 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
SNRPF-202ENST00000549580 SOBPA7XYQ1 873 aa9.64□□□□□ -0.87
SNRPF-202ENST00000549580 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
SNRPF-202ENST00000549580 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
SNRPF-202ENST00000549580 KDM4AO75164 1064 aa9.63□□□□□ -0.87
SNRPF-202ENST00000549580 RASSF7Q02833 373 aa9.63□□□□□ -0.87
SNRPF-202ENST00000549580 GDF11O95390 407 aa9.62□□□□□ -0.87
SNRPF-202ENST00000549580 SH3BP2P78314 561 aa9.62□□□□□ -0.87
SNRPF-202ENST00000549580 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
SNRPF-202ENST00000549580 NUDT12Q9BQG2 462 aa9.6□□□□□ -0.87
SNRPF-202ENST00000549580 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
SNRPF-202ENST00000549580 HOXA2O43364 376 aa9.59□□□□□ -0.87
SNRPF-202ENST00000549580 TIMP2P16035 220 aa9.58□□□□□ -0.88
SNRPF-202ENST00000549580 USP46P62068 366 aa9.58□□□□□ -0.88
SNRPF-202ENST00000549580 NNTQ13423 1086 aa9.58□□□□□ -0.88
SNRPF-202ENST00000549580 SCARF1Q14162 830 aa9.58□□□□□ -0.88
SNRPF-202ENST00000549580 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
SNRPF-202ENST00000549580 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
SNRPF-202ENST00000549580 GUCA2AQ02747 115 aa9.56□□□□□ -0.88
SNRPF-202ENST00000549580 MPNDQ8N594 471 aa9.56□□□□□ -0.88
SNRPF-202ENST00000549580 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
SNRPF-202ENST00000549580 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
SNRPF-202ENST00000549580 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
SNRPF-202ENST00000549580 KRT76Q01546 638 aa9.55□□□□□ -0.88
SNRPF-202ENST00000549580 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
SNRPF-202ENST00000549580 ADH1CP00326 375 aa9.53□□□□□ -0.88
SNRPF-202ENST00000549580 RETREG3Q86VR2 466 aa9.53□□□□□ -0.88
SNRPF-202ENST00000549580 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
SNRPF-202ENST00000549580 BCANQ96GW7 911 aa9.53□□□□□ -0.88
SNRPF-202ENST00000549580 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
SNRPF-202ENST00000549580 KDM2AQ9Y2K7 1162 aa9.52□□□□□ -0.89
SNRPF-202ENST00000549580 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
SNRPF-202ENST00000549580 CCNYL3P0C7X3 344 aa9.51□□□□□ -0.89
SNRPF-202ENST00000549580 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
SNRPF-202ENST00000549580 XP32Q5T750 250 aa9.51□□□□□ -0.89
SNRPF-202ENST00000549580 VARSP26640 1264 aaKnown RBP9.5□□□□□ -0.89
SNRPF-202ENST00000549580 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
SNRPF-202ENST00000549580 UNC93B1Q9H1C4 597 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms