RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-207ENST00000549526 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
SMARCD1-207ENST00000549526 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
SMARCD1-207ENST00000549526 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-207ENST00000549526 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
SMARCD1-207ENST00000549526 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
SMARCD1-207ENST00000549526 RGPD1P0DJD0 1748 aa13.18□□□□□ -0.3
SMARCD1-207ENST00000549526 VPS72Q15906 364 aa13.17□□□□□ -0.3
SMARCD1-207ENST00000549526 SLIT2O94813 1529 aa13.17□□□□□ -0.3
SMARCD1-207ENST00000549526 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
SMARCD1-207ENST00000549526 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
SMARCD1-207ENST00000549526 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
SMARCD1-207ENST00000549526 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
SMARCD1-207ENST00000549526 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
SMARCD1-207ENST00000549526 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
SMARCD1-207ENST00000549526 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
SMARCD1-207ENST00000549526 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
SMARCD1-207ENST00000549526 METP08581 1390 aa13.13□□□□□ -0.31
SMARCD1-207ENST00000549526 FOXO3O43524 673 aa13.13□□□□□ -0.31
SMARCD1-207ENST00000549526 KCNQ2O43526 872 aa13.12□□□□□ -0.31
SMARCD1-207ENST00000549526 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
SMARCD1-207ENST00000549526 CAMKK2Q96RR4 588 aa13.12□□□□□ -0.31
SMARCD1-207ENST00000549526 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
SMARCD1-207ENST00000549526 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
SMARCD1-207ENST00000549526 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
SMARCD1-207ENST00000549526 CROCC2H7BZ55 1655 aa13.1□□□□□ -0.31
SMARCD1-207ENST00000549526 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
SMARCD1-207ENST00000549526 UTRNP46939 3433 aa13.1□□□□□ -0.31
SMARCD1-207ENST00000549526 ABCC5O15440 1437 aa13.1□□□□□ -0.31
SMARCD1-207ENST00000549526 CHD4Q14839 1912 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 APBA3O96018 575 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 NRXN3Q9Y4C0 1643 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 PXDNQ92626 1479 aa13.09□□□□□ -0.31
SMARCD1-207ENST00000549526 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-207ENST00000549526 TRIM37O94972 964 aa13.08□□□□□ -0.32
SMARCD1-207ENST00000549526 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
SMARCD1-207ENST00000549526 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
SMARCD1-207ENST00000549526 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-207ENST00000549526 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
SMARCD1-207ENST00000549526 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SMARCD1-207ENST00000549526 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
SMARCD1-207ENST00000549526 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
SMARCD1-207ENST00000549526 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
SMARCD1-207ENST00000549526 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
SMARCD1-207ENST00000549526 CABLES1Q8TDN4 633 aa13.04□□□□□ -0.32
SMARCD1-207ENST00000549526 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
SMARCD1-207ENST00000549526 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
SMARCD1-207ENST00000549526 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
SMARCD1-207ENST00000549526 DAPK1P53355 1430 aa13.02□□□□□ -0.33
SMARCD1-207ENST00000549526 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
SMARCD1-207ENST00000549526 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
SMARCD1-207ENST00000549526 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
SMARCD1-207ENST00000549526 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
SMARCD1-207ENST00000549526 NUP188Q5SRE5 1749 aa13.01□□□□□ -0.33
SMARCD1-207ENST00000549526 RREB1Q92766 1687 aa13□□□□□ -0.33
SMARCD1-207ENST00000549526 E9PCH4 1651 aa12.99□□□□□ -0.33
SMARCD1-207ENST00000549526 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
SMARCD1-207ENST00000549526 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
SMARCD1-207ENST00000549526 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
SMARCD1-207ENST00000549526 IQGAP3Q86VI3 1631 aa12.99□□□□□ -0.33
SMARCD1-207ENST00000549526 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-207ENST00000549526 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
SMARCD1-207ENST00000549526 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
SMARCD1-207ENST00000549526 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 PSME1Q06323 249 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 HFM1A2PYH4 1435 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
SMARCD1-207ENST00000549526 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
SMARCD1-207ENST00000549526 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
SMARCD1-207ENST00000549526 MYOM1P52179 1685 aa12.93□□□□□ -0.34
SMARCD1-207ENST00000549526 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
SMARCD1-207ENST00000549526 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
SMARCD1-207ENST00000549526 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
SMARCD1-207ENST00000549526 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
SMARCD1-207ENST00000549526 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
SMARCD1-207ENST00000549526 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
SMARCD1-207ENST00000549526 CAPN15O75808 1086 aa12.9□□□□□ -0.34
SMARCD1-207ENST00000549526 PTGER2P43116 358 aa12.9□□□□□ -0.34
SMARCD1-207ENST00000549526 GPR162Q16538 588 aa12.9□□□□□ -0.34
SMARCD1-207ENST00000549526 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
SMARCD1-207ENST00000549526 NAIPQ13075 1403 aa12.88□□□□□ -0.35
SMARCD1-207ENST00000549526 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
SMARCD1-207ENST00000549526 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
SMARCD1-207ENST00000549526 CASZ1Q86V15 1759 aa12.87□□□□□ -0.35
SMARCD1-207ENST00000549526 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
SMARCD1-207ENST00000549526 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
SMARCD1-207ENST00000549526 NEXMIFQ5QGS0 1516 aa12.87□□□□□ -0.35
SMARCD1-207ENST00000549526 HSPA6P17066 643 aa12.86□□□□□ -0.35
SMARCD1-207ENST00000549526 SPATA31A1Q5TZJ5 1347 aa12.86□□□□□ -0.35
SMARCD1-207ENST00000549526 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
SMARCD1-207ENST00000549526 DLC1Q96QB1 1528 aa12.85□□□□□ -0.35
SMARCD1-207ENST00000549526 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
SMARCD1-207ENST00000549526 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
SMARCD1-207ENST00000549526 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
SMARCD1-207ENST00000549526 SBNO1A3KN83 1393 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms