RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 COL22A1Q8NFW1 1626 aaPredicted RBP10.78□□□□□ -0.68
LIN7A-202ENST00000549417 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
LIN7A-202ENST00000549417 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
LIN7A-202ENST00000549417 MYOM2P54296 1465 aa10.78□□□□□ -0.68
LIN7A-202ENST00000549417 METP08581 1390 aa10.77□□□□□ -0.68
LIN7A-202ENST00000549417 LAMC1P11047 1609 aa10.77□□□□□ -0.68
LIN7A-202ENST00000549417 BAG6P46379 1132 aa10.77□□□□□ -0.69
LIN7A-202ENST00000549417 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.69
LIN7A-202ENST00000549417 UNC5CLQ8IV45 518 aa10.77□□□□□ -0.69
LIN7A-202ENST00000549417 NRXN3Q9Y4C0 1643 aa10.76□□□□□ -0.69
LIN7A-202ENST00000549417 DAPK1P53355 1430 aa10.76□□□□□ -0.69
LIN7A-202ENST00000549417 RPRD2Q5VT52 1461 aaKnown RBP10.76□□□□□ -0.69
LIN7A-202ENST00000549417 KRT27Q7Z3Y8 459 aa10.76□□□□□ -0.69
LIN7A-202ENST00000549417 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
LIN7A-202ENST00000549417 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
LIN7A-202ENST00000549417 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
LIN7A-202ENST00000549417 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
LIN7A-202ENST00000549417 A0A0G2JS52 829 aa10.74□□□□□ -0.69
LIN7A-202ENST00000549417 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
LIN7A-202ENST00000549417 MYT1Q01538 1121 aa10.74□□□□□ -0.69
LIN7A-202ENST00000549417 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
LIN7A-202ENST00000549417 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
LIN7A-202ENST00000549417 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
LIN7A-202ENST00000549417 SLIT2O94813 1529 aa10.72□□□□□ -0.69
LIN7A-202ENST00000549417 UTRNP46939 3433 aa10.72□□□□□ -0.69
LIN7A-202ENST00000549417 E9PCH4 1651 aa10.71□□□□□ -0.69
LIN7A-202ENST00000549417 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
LIN7A-202ENST00000549417 PXDNQ92626 1479 aa10.7□□□□□ -0.7
LIN7A-202ENST00000549417 FOXO3O43524 673 aa10.7□□□□□ -0.7
LIN7A-202ENST00000549417 EZH2Q15910 746 aaKnown RBP10.7□□□□□ -0.7
LIN7A-202ENST00000549417 ZNF326Q5BKZ1 582 aaKnown RBP10.7□□□□□ -0.7
LIN7A-202ENST00000549417 NPHP3Q7Z494 1330 aa10.69□□□□□ -0.7
LIN7A-202ENST00000549417 NUTM2FA1L443 756 aa10.68□□□□□ -0.7
LIN7A-202ENST00000549417 VPS72Q15906 364 aa10.68□□□□□ -0.7
LIN7A-202ENST00000549417 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
LIN7A-202ENST00000549417 CAMTA1Q9Y6Y1 1673 aa10.68□□□□□ -0.7
LIN7A-202ENST00000549417 CEP350Q5VT06 3117 aa10.68□□□□□ -0.7
LIN7A-202ENST00000549417 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
LIN7A-202ENST00000549417 ROBO2Q9HCK4 1378 aa10.67□□□□□ -0.7
LIN7A-202ENST00000549417 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
LIN7A-202ENST00000549417 ZNF784Q8NCA9 323 aaPredicted RBP10.67□□□□□ -0.7
LIN7A-202ENST00000549417 ANKRD50Q9ULJ7 1429 aa10.67□□□□□ -0.7
LIN7A-202ENST00000549417 PLCH1Q4KWH8 1693 aa10.66□□□□□ -0.7
LIN7A-202ENST00000549417 USP32Q8NFA0 1604 aa10.66□□□□□ -0.7
LIN7A-202ENST00000549417 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
LIN7A-202ENST00000549417 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
LIN7A-202ENST00000549417 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
LIN7A-202ENST00000549417 ADGRL2O95490 1459 aa10.65□□□□□ -0.7
LIN7A-202ENST00000549417 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
LIN7A-202ENST00000549417 IQGAP3Q86VI3 1631 aa10.64□□□□□ -0.71
LIN7A-202ENST00000549417 C1QTNF8P60827 252 aa10.63□□□□□ -0.71
LIN7A-202ENST00000549417 SPATA31A3Q5VYP0 1347 aa10.62□□□□□ -0.71
LIN7A-202ENST00000549417 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
LIN7A-202ENST00000549417 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
LIN7A-202ENST00000549417 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
LIN7A-202ENST00000549417 TRIM37O94972 964 aa10.61□□□□□ -0.71
LIN7A-202ENST00000549417 DISP2A7MBM2 1401 aa10.6□□□□□ -0.71
LIN7A-202ENST00000549417 FAM83GA6ND36 823 aa10.6□□□□□ -0.71
LIN7A-202ENST00000549417 APBA3O96018 575 aa10.6□□□□□ -0.71
LIN7A-202ENST00000549417 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
LIN7A-202ENST00000549417 FAM50AQ14320 339 aaKnown RBP10.6□□□□□ -0.71
LIN7A-202ENST00000549417 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
LIN7A-202ENST00000549417 SPON1Q9HCB6 807 aa10.6□□□□□ -0.71
LIN7A-202ENST00000549417 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
LIN7A-202ENST00000549417 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
LIN7A-202ENST00000549417 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
LIN7A-202ENST00000549417 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
LIN7A-202ENST00000549417 CDC42BPGQ6DT37 1551 aa10.58□□□□□ -0.72
LIN7A-202ENST00000549417 KCNQ2O43526 872 aa10.58□□□□□ -0.72
LIN7A-202ENST00000549417 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
LIN7A-202ENST00000549417 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
LIN7A-202ENST00000549417 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
LIN7A-202ENST00000549417 ADGRB2O60241 1585 aa10.57□□□□□ -0.72
LIN7A-202ENST00000549417 NUP155O75694 1391 aa10.57□□□□□ -0.72
LIN7A-202ENST00000549417 NRAPQ86VF7 1730 aa10.57□□□□□ -0.72
LIN7A-202ENST00000549417 ABCA3Q99758 1704 aa10.57□□□□□ -0.72
LIN7A-202ENST00000549417 NAIPQ13075 1403 aa10.57□□□□□ -0.72
LIN7A-202ENST00000549417 NBPF8Q3BBV2 869 aa10.56□□□□□ -0.72
LIN7A-202ENST00000549417 NBPF14Q5TI25 921 aa10.56□□□□□ -0.72
LIN7A-202ENST00000549417 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
LIN7A-202ENST00000549417 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
LIN7A-202ENST00000549417 RREB1Q92766 1687 aa10.56□□□□□ -0.72
LIN7A-202ENST00000549417 WAPLQ7Z5K2 1190 aa10.55□□□□□ -0.72
LIN7A-202ENST00000549417 CLTCL1P53675 1640 aa10.55□□□□□ -0.72
LIN7A-202ENST00000549417 STK26Q9P289 416 aa10.54□□□□□ -0.72
LIN7A-202ENST00000549417 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
LIN7A-202ENST00000549417 FAM196AQ6ZSG2 479 aa10.53□□□□□ -0.72
LIN7A-202ENST00000549417 KIF1AQ12756 1690 aa10.53□□□□□ -0.72
LIN7A-202ENST00000549417 SPATA31A5Q5VU36 1347 aa10.53□□□□□ -0.72
LIN7A-202ENST00000549417 SPATA31A7Q8IWB4 1347 aa10.53□□□□□ -0.72
LIN7A-202ENST00000549417 CHD4Q14839 1912 aa10.52□□□□□ -0.72
LIN7A-202ENST00000549417 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.72
LIN7A-202ENST00000549417 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.72
LIN7A-202ENST00000549417 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.72
LIN7A-202ENST00000549417 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
LIN7A-202ENST00000549417 PRAG1Q86YV5 1406 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 FMN2Q9NZ56 1722 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 PSME1Q06323 249 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 APLP2Q06481 763 aa10.51□□□□□ -0.73
LIN7A-202ENST00000549417 PDGFDQ9GZP0 370 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms