RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TRPC5Q9UL62 973 aaPredicted RBP30.14■■■□□ 2.42
GATC-202ENST00000548171 NPHP3Q7Z494 1330 aa30.14■■■□□ 2.42
GATC-202ENST00000548171 MARF1Q9Y4F3 1742 aaKnown RBP30.13■■■□□ 2.41
GATC-202ENST00000548171 FNBP4Q8N3X1 1017 aaPredicted RBP30.13■■■□□ 2.41
GATC-202ENST00000548171 ATAD2Q6PL18 1390 aa30.13■■■□□ 2.41
GATC-202ENST00000548171 PXDNQ92626 1479 aa30.1■■■□□ 2.41
GATC-202ENST00000548171 MYOM2P54296 1465 aa30.09■■■□□ 2.41
GATC-202ENST00000548171 ESCO1Q5FWF5 840 aa30.09■■■□□ 2.41
GATC-202ENST00000548171 IFT172Q9UG01 1749 aa30.09■■■□□ 2.41
GATC-202ENST00000548171 TECPR2O15040 1411 aa30.08■■■□□ 2.41
GATC-202ENST00000548171 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
GATC-202ENST00000548171 ATRNO75882 1429 aa30.07■■■□□ 2.4
GATC-202ENST00000548171 KNDC1Q76NI1 1749 aa30.07■■■□□ 2.4
GATC-202ENST00000548171 LRPPRCP42704 1394 aaKnown RBP30.06■■■□□ 2.4
GATC-202ENST00000548171 ANKRD30BQ9BXX2 1392 aa30.04■■■□□ 2.4
GATC-202ENST00000548171 ADGRF5Q8IZF2 1346 aa30.03■■■□□ 2.4
GATC-202ENST00000548171 SPATA31E1Q6ZUB1 1445 aa30.03■■■□□ 2.4
GATC-202ENST00000548171 FOXO3O43524 673 aa30.01■■■□□ 2.39
GATC-202ENST00000548171 ABCC11Q96J66 1382 aa30.01■■■□□ 2.39
GATC-202ENST00000548171 BCL9LQ86UU0 1499 aa30■■■□□ 2.39
GATC-202ENST00000548171 FOXD1Q16676 465 aa30■■■□□ 2.39
GATC-202ENST00000548171 KIF1AQ12756 1690 aa30■■■□□ 2.39
GATC-202ENST00000548171 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.99■■■□□ 2.39
GATC-202ENST00000548171 FMN2Q9NZ56 1722 aa29.99■■■□□ 2.39
GATC-202ENST00000548171 STK26Q9P289 416 aa29.98■■■□□ 2.39
GATC-202ENST00000548171 RGL3Q3MIN7 710 aa29.97■■■□□ 2.39
GATC-202ENST00000548171 WAPLQ7Z5K2 1190 aa29.97■■■□□ 2.39
GATC-202ENST00000548171 PIK3C2GO75747 1445 aa29.96■■■□□ 2.39
GATC-202ENST00000548171 XPCQ01831 940 aaPredicted RBP29.96■■■□□ 2.39
GATC-202ENST00000548171 CCDC125Q86Z20 511 aa29.93■■■□□ 2.38
GATC-202ENST00000548171 MPHOSPH9Q99550 1183 aa29.92■■■□□ 2.38
GATC-202ENST00000548171 YTHDC2Q9H6S0 1430 aaKnown RBP29.91■■■□□ 2.38
GATC-202ENST00000548171 NUTM2FA1L443 756 aa29.91■■■□□ 2.38
GATC-202ENST00000548171 TMEM132EQ6IEE7 984 aa29.91■■■□□ 2.38
GATC-202ENST00000548171 GJD4Q96KN9 370 aaPredicted RBP29.91■■■□□ 2.38
GATC-202ENST00000548171 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
GATC-202ENST00000548171 SPATA31A3Q5VYP0 1347 aa29.9■■■□□ 2.38
GATC-202ENST00000548171 SIRT1Q96EB6 747 aa29.89■■■□□ 2.38
GATC-202ENST00000548171 RGPD8O14715 1765 aaPredicted RBP29.88■■■□□ 2.37
GATC-202ENST00000548171 SLIT2O94813 1529 aa29.87■■■□□ 2.37
GATC-202ENST00000548171 USP32Q8NFA0 1604 aa29.87■■■□□ 2.37
GATC-202ENST00000548171 ZRANB1Q9UGI0 708 aa29.87■■■□□ 2.37
GATC-202ENST00000548171 ACIN1Q9UKV3 1341 aaKnown RBP29.86■■■□□ 2.37
GATC-202ENST00000548171 UNC5CLQ8IV45 518 aa29.85■■■□□ 2.37
GATC-202ENST00000548171 EP400Q96L91 3159 aa29.85■■■□□ 2.37
GATC-202ENST00000548171 GLI3P10071 1580 aa29.83■■■□□ 2.37
GATC-202ENST00000548171 RALGAPBQ86X10 1494 aa29.82■■■□□ 2.36
GATC-202ENST00000548171 KRT28Q7Z3Y7 464 aa29.82■■■□□ 2.36
GATC-202ENST00000548171 C14orf93Q9H972 538 aaKnown RBP29.82■■■□□ 2.36
GATC-202ENST00000548171 NRXN1Q9ULB1 1477 aa29.8■■■□□ 2.36
GATC-202ENST00000548171 PSME1Q06323 249 aa29.8■■■□□ 2.36
GATC-202ENST00000548171 BRWD3Q6RI45 1802 aa29.8■■■□□ 2.36
GATC-202ENST00000548171 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
GATC-202ENST00000548171 NWD2Q9ULI1 1742 aa29.79■■■□□ 2.36
GATC-202ENST00000548171 DHX57Q6P158 1386 aaKnown RBP29.78■■■□□ 2.36
GATC-202ENST00000548171 PHF8Q9UPP1 1060 aa29.78■■■□□ 2.36
GATC-202ENST00000548171 PLCH1Q4KWH8 1693 aa29.76■■■□□ 2.36
GATC-202ENST00000548171 HAP1P54257 671 aaPredicted RBP29.76■■■□□ 2.35
GATC-202ENST00000548171 BLMP54132 1417 aaPredicted RBP29.76■■■□□ 2.35
GATC-202ENST00000548171 ABCA3Q99758 1704 aa29.76■■■□□ 2.35
GATC-202ENST00000548171 SBNO1A3KN83 1393 aa29.75■■■□□ 2.35
GATC-202ENST00000548171 DLC1Q96QB1 1528 aa29.72■■■□□ 2.35
GATC-202ENST00000548171 ARHGEF10O15013 1369 aa29.72■■■□□ 2.35
GATC-202ENST00000548171 SRCAPQ6ZRS2 3230 aa29.71■■■□□ 2.35
GATC-202ENST00000548171 CFAP70Q5T0N1 1121 aa29.71■■■□□ 2.35
GATC-202ENST00000548171 VPS72Q15906 364 aa29.7■■■□□ 2.35
GATC-202ENST00000548171 PRAM1Q96QH2 718 aa29.69■■■□□ 2.34
GATC-202ENST00000548171 ANKARQ7Z5J8 1434 aa29.69■■■□□ 2.34
GATC-202ENST00000548171 ADGRB2O60241 1585 aa29.69■■■□□ 2.34
GATC-202ENST00000548171 CABLES1Q8TDN4 633 aa29.67■■■□□ 2.34
GATC-202ENST00000548171 SEPT12Q8IYM1 358 aa29.66■■■□□ 2.34
GATC-202ENST00000548171 ONECUT3O60422 494 aaPredicted RBP29.65■■■□□ 2.34
GATC-202ENST00000548171 POGKQ9P215 609 aa29.65■■■□□ 2.34
GATC-202ENST00000548171 SAFB2Q14151 953 aaKnown RBP eCLIP29.64■■■□□ 2.34
GATC-202ENST00000548171 LMOD2Q6P5Q4 547 aa29.64■■■□□ 2.34
GATC-202ENST00000548171 SF3B2Q13435 895 aaKnown RBP29.63■■■□□ 2.33
GATC-202ENST00000548171 TRPM3Q9HCF6 1732 aaPredicted RBP29.62■■■□□ 2.33
GATC-202ENST00000548171 CCDC9Q9Y3X0 531 aaKnown RBP29.62■■■□□ 2.33
GATC-202ENST00000548171 ADGRB1O14514 1584 aa29.61■■■□□ 2.33
GATC-202ENST00000548171 NRAPQ86VF7 1730 aa29.6■■■□□ 2.33
GATC-202ENST00000548171 EIF3AQ14152 1382 aaKnown RBP29.6■■■□□ 2.33
GATC-202ENST00000548171 ALS2Q96Q42 1657 aa29.6■■■□□ 2.33
GATC-202ENST00000548171 PLEKHG5O94827 1062 aa29.58■■■□□ 2.33
GATC-202ENST00000548171 KRT27Q7Z3Y8 459 aa29.58■■■□□ 2.33
GATC-202ENST00000548171 PMFBP1Q8TBY8 1022 aa29.58■■■□□ 2.33
GATC-202ENST00000548171 COL14A1Q05707 1796 aaKnown RBP29.57■■■□□ 2.32
GATC-202ENST00000548171 FAM83GA6ND36 823 aa29.57■■■□□ 2.32
GATC-202ENST00000548171 DEFB132Q7Z7B7 95 aa29.57■■■□□ 2.32
GATC-202ENST00000548171 GPRASP1Q5JY77 1395 aa29.56■■■□□ 2.32
GATC-202ENST00000548171 TULP4Q9NRJ4 1543 aa29.54■■■□□ 2.32
GATC-202ENST00000548171 TRAK1Q9UPV9 953 aa29.52■■■□□ 2.32
GATC-202ENST00000548171 RAB3GAP2Q9H2M9 1393 aa29.51■■■□□ 2.31
GATC-202ENST00000548171 LRP5O75197 1615 aa29.5■■■□□ 2.31
GATC-202ENST00000548171 HIRIP3Q9BW71 556 aaPredicted RBP29.5■■■□□ 2.31
GATC-202ENST00000548171 BTG4Q9NY30 223 aa29.5■■■□□ 2.31
GATC-202ENST00000548171 CRYBG1Q9Y4K1 1723 aa29.5■■■□□ 2.31
GATC-202ENST00000548171 ITSN1Q15811 1721 aa29.49■■■□□ 2.31
GATC-202ENST00000548171 A0A0G2JS52 829 aa29.49■■■□□ 2.31
GATC-202ENST00000548171 MYT1Q01538 1121 aa29.49■■■□□ 2.31
GATC-202ENST00000548171 STAC3Q96MF2 364 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms