RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NUP155O75694 1391 aa19.89■□□□□ 0.77
RAB5B-203ENST00000546810 BLMP54132 1417 aaPredicted RBP19.89■□□□□ 0.77
RAB5B-203ENST00000546810 COL22A1Q8NFW1 1626 aaPredicted RBP19.89■□□□□ 0.77
RAB5B-203ENST00000546810 MYOM2P54296 1465 aa19.88■□□□□ 0.77
RAB5B-203ENST00000546810 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
RAB5B-203ENST00000546810 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
RAB5B-203ENST00000546810 SF3B2Q13435 895 aaKnown RBP19.83■□□□□ 0.77
RAB5B-203ENST00000546810 NPHP3Q7Z494 1330 aa19.82■□□□□ 0.76
RAB5B-203ENST00000546810 LRP5O75197 1615 aa19.82■□□□□ 0.76
RAB5B-203ENST00000546810 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
RAB5B-203ENST00000546810 RALGAPBQ86X10 1494 aa19.8■□□□□ 0.76
RAB5B-203ENST00000546810 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
RAB5B-203ENST00000546810 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
RAB5B-203ENST00000546810 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
RAB5B-203ENST00000546810 HRCP23327 699 aa19.79■□□□□ 0.76
RAB5B-203ENST00000546810 SPHKAPQ2M3C7 1700 aa19.79■□□□□ 0.76
RAB5B-203ENST00000546810 PXDNQ92626 1479 aa19.79■□□□□ 0.76
RAB5B-203ENST00000546810 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
RAB5B-203ENST00000546810 GLI3P10071 1580 aa19.78■□□□□ 0.76
RAB5B-203ENST00000546810 XPCQ01831 940 aaPredicted RBP19.77■□□□□ 0.76
RAB5B-203ENST00000546810 FOXO3O43524 673 aa19.76■□□□□ 0.75
RAB5B-203ENST00000546810 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
RAB5B-203ENST00000546810 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
RAB5B-203ENST00000546810 SLIT2O94813 1529 aa19.76■□□□□ 0.75
RAB5B-203ENST00000546810 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
RAB5B-203ENST00000546810 PSDA5PKW4 1024 aaPredicted RBP19.74■□□□□ 0.75
RAB5B-203ENST00000546810 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
RAB5B-203ENST00000546810 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
RAB5B-203ENST00000546810 VGFO15240 615 aaPredicted RBP19.73■□□□□ 0.75
RAB5B-203ENST00000546810 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
RAB5B-203ENST00000546810 CDC42BPGQ6DT37 1551 aa19.7■□□□□ 0.74
RAB5B-203ENST00000546810 BRWD3Q6RI45 1802 aa19.7■□□□□ 0.74
RAB5B-203ENST00000546810 KRT27Q7Z3Y8 459 aa19.69■□□□□ 0.74
RAB5B-203ENST00000546810 MPHOSPH9Q99550 1183 aa19.69■□□□□ 0.74
RAB5B-203ENST00000546810 BAG6P46379 1132 aa19.68■□□□□ 0.74
RAB5B-203ENST00000546810 VPS72Q15906 364 aa19.68■□□□□ 0.74
RAB5B-203ENST00000546810 ONECUT3O60422 494 aaPredicted RBP19.67■□□□□ 0.74
RAB5B-203ENST00000546810 SPATA31A3Q5VYP0 1347 aa19.67■□□□□ 0.74
RAB5B-203ENST00000546810 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
RAB5B-203ENST00000546810 CCDC9Q9Y3X0 531 aaKnown RBP19.65■□□□□ 0.74
RAB5B-203ENST00000546810 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
RAB5B-203ENST00000546810 HAP1P54257 671 aaPredicted RBP19.64■□□□□ 0.73
RAB5B-203ENST00000546810 KIF1BO60333 1816 aa19.64■□□□□ 0.73
RAB5B-203ENST00000546810 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
RAB5B-203ENST00000546810 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
RAB5B-203ENST00000546810 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
RAB5B-203ENST00000546810 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
RAB5B-203ENST00000546810 A0A0G2JS52 829 aa19.6■□□□□ 0.73
RAB5B-203ENST00000546810 MYT1Q01538 1121 aa19.6■□□□□ 0.73
RAB5B-203ENST00000546810 EN1Q05925 392 aaPredicted RBP19.59■□□□□ 0.73
RAB5B-203ENST00000546810 R3HDM1Q15032 1099 aaKnown RBP19.59■□□□□ 0.73
RAB5B-203ENST00000546810 WAPLQ7Z5K2 1190 aa19.59■□□□□ 0.73
RAB5B-203ENST00000546810 CABLES1Q8TDN4 633 aa19.59■□□□□ 0.73
RAB5B-203ENST00000546810 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
RAB5B-203ENST00000546810 STK26Q9P289 416 aa19.57■□□□□ 0.72
RAB5B-203ENST00000546810 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
RAB5B-203ENST00000546810 NWD2Q9ULI1 1742 aa19.56■□□□□ 0.72
RAB5B-203ENST00000546810 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
RAB5B-203ENST00000546810 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
RAB5B-203ENST00000546810 TECPR2O15040 1411 aa19.55■□□□□ 0.72
RAB5B-203ENST00000546810 PSME1Q06323 249 aa19.55■□□□□ 0.72
RAB5B-203ENST00000546810 FAM98CQ17RN3 349 aaKnown RBP19.55■□□□□ 0.72
RAB5B-203ENST00000546810 YY1P25490 414 aa19.54■□□□□ 0.72
RAB5B-203ENST00000546810 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
RAB5B-203ENST00000546810 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
RAB5B-203ENST00000546810 PPLO60437 1756 aa19.52■□□□□ 0.72
RAB5B-203ENST00000546810 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
RAB5B-203ENST00000546810 FMN2Q9NZ56 1722 aa19.51■□□□□ 0.71
RAB5B-203ENST00000546810 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
RAB5B-203ENST00000546810 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
RAB5B-203ENST00000546810 ADGRF5Q8IZF2 1346 aa19.51■□□□□ 0.71
RAB5B-203ENST00000546810 SBNO1A3KN83 1393 aa19.5■□□□□ 0.71
RAB5B-203ENST00000546810 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
RAB5B-203ENST00000546810 ABCC11Q96J66 1382 aa19.5■□□□□ 0.71
RAB5B-203ENST00000546810 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
RAB5B-203ENST00000546810 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
RAB5B-203ENST00000546810 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
RAB5B-203ENST00000546810 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
RAB5B-203ENST00000546810 BTG4Q9NY30 223 aa19.47■□□□□ 0.71
RAB5B-203ENST00000546810 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
RAB5B-203ENST00000546810 ABCA3Q99758 1704 aa19.46■□□□□ 0.71
RAB5B-203ENST00000546810 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
RAB5B-203ENST00000546810 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
RAB5B-203ENST00000546810 CAMKK2Q96RR4 588 aa19.44■□□□□ 0.7
RAB5B-203ENST00000546810 KNDC1Q76NI1 1749 aa19.44■□□□□ 0.7
RAB5B-203ENST00000546810 SPATA31A5Q5VU36 1347 aa19.43■□□□□ 0.7
RAB5B-203ENST00000546810 SPATA31A7Q8IWB4 1347 aa19.43■□□□□ 0.7
RAB5B-203ENST00000546810 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
RAB5B-203ENST00000546810 TNS1Q9HBL0 1735 aaKnown RBP19.42■□□□□ 0.7
RAB5B-203ENST00000546810 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
RAB5B-203ENST00000546810 SIRT1Q96EB6 747 aa19.41■□□□□ 0.7
RAB5B-203ENST00000546810 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
RAB5B-203ENST00000546810 TRIM37O94972 964 aa19.4■□□□□ 0.7
RAB5B-203ENST00000546810 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
RAB5B-203ENST00000546810 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
RAB5B-203ENST00000546810 PARD3Q8TEW0 1356 aa19.39■□□□□ 0.69
RAB5B-203ENST00000546810 IFT172Q9UG01 1749 aa19.39■□□□□ 0.69
RAB5B-203ENST00000546810 RGPD8O14715 1765 aaPredicted RBP19.39■□□□□ 0.69
RAB5B-203ENST00000546810 APBA3O96018 575 aa19.38■□□□□ 0.69
RAB5B-203ENST00000546810 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms