RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
UBC-214ENST00000546271 DCAF11Q8TEB1 546 aa17.48■□□□□ 0.39
UBC-214ENST00000546271 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
UBC-214ENST00000546271 DDX17Q92841 729 aaKnown RBP17.47■□□□□ 0.39
UBC-214ENST00000546271 KDM2AQ9Y2K7 1162 aa17.47■□□□□ 0.39
UBC-214ENST00000546271 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
UBC-214ENST00000546271 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
UBC-214ENST00000546271 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
UBC-214ENST00000546271 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
UBC-214ENST00000546271 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
UBC-214ENST00000546271 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
UBC-214ENST00000546271 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
UBC-214ENST00000546271 PLEKHH1Q9ULM0 1364 aa17.44■□□□□ 0.38
UBC-214ENST00000546271 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
UBC-214ENST00000546271 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
UBC-214ENST00000546271 KIF1AQ12756 1690 aa17.43■□□□□ 0.38
UBC-214ENST00000546271 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
UBC-214ENST00000546271 PNPLA6Q8IY17 1366 aa17.41■□□□□ 0.38
UBC-214ENST00000546271 ADGRB1O14514 1584 aa17.41■□□□□ 0.38
UBC-214ENST00000546271 COL22A1Q8NFW1 1626 aaPredicted RBP17.4■□□□□ 0.38
UBC-214ENST00000546271 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
UBC-214ENST00000546271 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.37
UBC-214ENST00000546271 NUTM2FA1L443 756 aa17.39■□□□□ 0.37
UBC-214ENST00000546271 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
UBC-214ENST00000546271 DLC1Q96QB1 1528 aa17.38■□□□□ 0.37
UBC-214ENST00000546271 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
UBC-214ENST00000546271 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
UBC-214ENST00000546271 ZNF772Q68DY9 489 aaPredicted RBP17.36■□□□□ 0.37
UBC-214ENST00000546271 TRAK1Q9UPV9 953 aa17.36■□□□□ 0.37
UBC-214ENST00000546271 PXDNQ92626 1479 aa17.36■□□□□ 0.37
UBC-214ENST00000546271 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
UBC-214ENST00000546271 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
UBC-214ENST00000546271 AFF2P51816 1311 aa17.34■□□□□ 0.37
UBC-214ENST00000546271 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
UBC-214ENST00000546271 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBC-214ENST00000546271 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
UBC-214ENST00000546271 C8orf37Q96NL8 207 aa17.34■□□□□ 0.37
UBC-214ENST00000546271 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
UBC-214ENST00000546271 POGKQ9P215 609 aa17.34■□□□□ 0.37
UBC-214ENST00000546271 USP32Q8NFA0 1604 aa17.32■□□□□ 0.36
UBC-214ENST00000546271 ADAMTS2O95450 1211 aa17.32■□□□□ 0.36
UBC-214ENST00000546271 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
UBC-214ENST00000546271 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
UBC-214ENST00000546271 L3MBTL2Q969R5 705 aa17.3■□□□□ 0.36
UBC-214ENST00000546271 KIAA1210Q9ULL0 1709 aa17.3■□□□□ 0.36
UBC-214ENST00000546271 FOXO3O43524 673 aa17.29■□□□□ 0.36
UBC-214ENST00000546271 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
UBC-214ENST00000546271 ITSN1Q15811 1721 aa17.29■□□□□ 0.36
UBC-214ENST00000546271 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.36
UBC-214ENST00000546271 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
UBC-214ENST00000546271 RXRBP28702 533 aa17.26■□□□□ 0.35
UBC-214ENST00000546271 NGLY1Q96IV0 654 aa17.26■□□□□ 0.35
UBC-214ENST00000546271 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
UBC-214ENST00000546271 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
UBC-214ENST00000546271 RGS12O14924 1447 aa17.24■□□□□ 0.35
UBC-214ENST00000546271 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
UBC-214ENST00000546271 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
UBC-214ENST00000546271 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
UBC-214ENST00000546271 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
UBC-214ENST00000546271 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
UBC-214ENST00000546271 PLCH1Q4KWH8 1693 aa17.23■□□□□ 0.35
UBC-214ENST00000546271 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
UBC-214ENST00000546271 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
UBC-214ENST00000546271 EIF3AQ14152 1382 aaKnown RBP17.22■□□□□ 0.35
UBC-214ENST00000546271 PLEKHG5O94827 1062 aa17.21■□□□□ 0.35
UBC-214ENST00000546271 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
UBC-214ENST00000546271 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
UBC-214ENST00000546271 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
UBC-214ENST00000546271 USP21Q9UK80 565 aa17.2■□□□□ 0.34
UBC-214ENST00000546271 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
UBC-214ENST00000546271 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
UBC-214ENST00000546271 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
UBC-214ENST00000546271 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
UBC-214ENST00000546271 PMFBP1Q8TBY8 1022 aa17.19■□□□□ 0.34
UBC-214ENST00000546271 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
UBC-214ENST00000546271 RBM6P78332 1123 aaKnown RBP17.18■□□□□ 0.34
UBC-214ENST00000546271 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
UBC-214ENST00000546271 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
UBC-214ENST00000546271 ATRNO75882 1429 aa17.17■□□□□ 0.34
UBC-214ENST00000546271 PSME1Q06323 249 aa17.17■□□□□ 0.34
UBC-214ENST00000546271 NWD2Q9ULI1 1742 aa17.17■□□□□ 0.34
UBC-214ENST00000546271 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
UBC-214ENST00000546271 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
UBC-214ENST00000546271 CDK19Q9BWU1 502 aa17.16■□□□□ 0.34
UBC-214ENST00000546271 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
UBC-214ENST00000546271 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
UBC-214ENST00000546271 ATP7BP35670 1465 aa17.15■□□□□ 0.34
UBC-214ENST00000546271 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
UBC-214ENST00000546271 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
UBC-214ENST00000546271 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
UBC-214ENST00000546271 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
UBC-214ENST00000546271 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
UBC-214ENST00000546271 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
UBC-214ENST00000546271 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
UBC-214ENST00000546271 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
UBC-214ENST00000546271 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
UBC-214ENST00000546271 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
UBC-214ENST00000546271 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
UBC-214ENST00000546271 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBC-214ENST00000546271 SLIT2O94813 1529 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms