RNA–Protein interactions for RNA: ENST00000544540.5

TMEM72-203, Transcript of transmembrane protein 72, humanhuman

TSL 1 (best) BASIC

Gene TMEM72, Length 1,018 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM72-203ENST00000544540 LAMC1P11047 1609 aa28.79■■■□□ 2.2
TMEM72-203ENST00000544540 SPATA31A6Q5VVP1 1343 aa28.78■■■□□ 2.2
TMEM72-203ENST00000544540 LRP6O75581 1613 aa28.78■■■□□ 2.2
TMEM72-203ENST00000544540 CDC42BPGQ6DT37 1551 aa28.77■■■□□ 2.2
TMEM72-203ENST00000544540 KDM2AQ9Y2K7 1162 aa28.76■■■□□ 2.19
TMEM72-203ENST00000544540 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
TMEM72-203ENST00000544540 DHX57Q6P158 1386 aaKnown RBP28.75■■■□□ 2.19
TMEM72-203ENST00000544540 POTEAQ6S8J7 498 aa28.73■■■□□ 2.19
TMEM72-203ENST00000544540 LRRC59Q96AG4 307 aaKnown RBP28.73■■■□□ 2.19
TMEM72-203ENST00000544540 NUTM2FA1L443 756 aa28.7■■■□□ 2.18
TMEM72-203ENST00000544540 NUTM2BA6NNL0 878 aaPredicted RBP28.7■■■□□ 2.18
TMEM72-203ENST00000544540 NUTM2EB1AL46 878 aaPredicted RBP28.7■■■□□ 2.18
TMEM72-203ENST00000544540 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.18
TMEM72-203ENST00000544540 NUTM2AQ8IVF1 878 aaPredicted RBP28.7■■■□□ 2.18
TMEM72-203ENST00000544540 SIRT1Q96EB6 747 aa28.7■■■□□ 2.18
TMEM72-203ENST00000544540 ESCO1Q5FWF5 840 aa28.69■■■□□ 2.18
TMEM72-203ENST00000544540 ADGRB1O14514 1584 aa28.67■■■□□ 2.18
TMEM72-203ENST00000544540 PNPLA6Q8IY17 1366 aa28.66■■■□□ 2.18
TMEM72-203ENST00000544540 SOS2Q07890 1332 aaPredicted RBP28.66■■■□□ 2.18
TMEM72-203ENST00000544540 FMN2Q9NZ56 1722 aa28.66■■■□□ 2.18
TMEM72-203ENST00000544540 SAFB2Q14151 953 aaKnown RBP eCLIP28.65■■■□□ 2.18
TMEM72-203ENST00000544540 PRAM1Q96QH2 718 aa28.65■■■□□ 2.18
TMEM72-203ENST00000544540 STAC3Q96MF2 364 aa28.62■■■□□ 2.17
TMEM72-203ENST00000544540 DLC1Q96QB1 1528 aa28.62■■■□□ 2.17
TMEM72-203ENST00000544540 TRAK1Q9UPV9 953 aa28.61■■■□□ 2.17
TMEM72-203ENST00000544540 POGKQ9P215 609 aa28.6■■■□□ 2.17
TMEM72-203ENST00000544540 FOXO3O43524 673 aa28.59■■■□□ 2.17
TMEM72-203ENST00000544540 NPHP3Q7Z494 1330 aa28.59■■■□□ 2.17
TMEM72-203ENST00000544540 RGPD8O14715 1765 aaPredicted RBP28.58■■■□□ 2.17
TMEM72-203ENST00000544540 XPCQ01831 940 aaPredicted RBP28.57■■■□□ 2.16
TMEM72-203ENST00000544540 PXDNQ92626 1479 aa28.56■■■□□ 2.16
TMEM72-203ENST00000544540 ZNF772Q68DY9 489 aaPredicted RBP28.54■■■□□ 2.16
TMEM72-203ENST00000544540 KIF1AQ12756 1690 aa28.52■■■□□ 2.16
TMEM72-203ENST00000544540 AFF2P51816 1311 aa28.51■■■□□ 2.15
TMEM72-203ENST00000544540 C8orf37Q96NL8 207 aa28.51■■■□□ 2.15
TMEM72-203ENST00000544540 HIRIP3Q9BW71 556 aaPredicted RBP28.51■■■□□ 2.15
TMEM72-203ENST00000544540 ADAMTS2O95450 1211 aa28.5■■■□□ 2.15
TMEM72-203ENST00000544540 COL22A1Q8NFW1 1626 aaPredicted RBP28.5■■■□□ 2.15
TMEM72-203ENST00000544540 ADGRB2O60241 1585 aa28.5■■■□□ 2.15
TMEM72-203ENST00000544540 MINK1Q8N4C8 1332 aaPredicted RBP28.49■■■□□ 2.15
TMEM72-203ENST00000544540 PHF8Q9UPP1 1060 aa28.48■■■□□ 2.15
TMEM72-203ENST00000544540 USP32Q8NFA0 1604 aa28.47■■■□□ 2.15
TMEM72-203ENST00000544540 ARHGEF28Q8N1W1 1705 aaKnown RBP28.47■■■□□ 2.15
TMEM72-203ENST00000544540 KRT28Q7Z3Y7 464 aa28.45■■■□□ 2.14
TMEM72-203ENST00000544540 SIN3AQ96ST3 1273 aa28.45■■■□□ 2.14
TMEM72-203ENST00000544540 KIAA1210Q9ULL0 1709 aa28.45■■■□□ 2.14
TMEM72-203ENST00000544540 NGLY1Q96IV0 654 aa28.43■■■□□ 2.14
TMEM72-203ENST00000544540 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
TMEM72-203ENST00000544540 NBPF1Q3BBV0 1214 aa28.42■■■□□ 2.14
TMEM72-203ENST00000544540 PMFBP1Q8TBY8 1022 aa28.41■■■□□ 2.14
TMEM72-203ENST00000544540 SPATA31A3Q5VYP0 1347 aa28.41■■■□□ 2.14
TMEM72-203ENST00000544540 WASLO00401 505 aaPredicted RBP28.4■■■□□ 2.14
TMEM72-203ENST00000544540 RXRBP28702 533 aa28.4■■■□□ 2.14
TMEM72-203ENST00000544540 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
TMEM72-203ENST00000544540 PRR36Q9H6K5 1346 aa28.39■■■□□ 2.13
TMEM72-203ENST00000544540 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
TMEM72-203ENST00000544540 QTRT2Q9H974 415 aaKnown RBP28.37■■■□□ 2.13
TMEM72-203ENST00000544540 TULP4Q9NRJ4 1543 aa28.37■■■□□ 2.13
TMEM72-203ENST00000544540 PSME1Q06323 249 aa28.36■■■□□ 2.13
TMEM72-203ENST00000544540 MARF1Q9Y4F3 1742 aaKnown RBP28.35■■■□□ 2.13
TMEM72-203ENST00000544540 EIF3AQ14152 1382 aaKnown RBP28.35■■■□□ 2.13
TMEM72-203ENST00000544540 TNS3Q68CZ2 1445 aa28.34■■■□□ 2.13
TMEM72-203ENST00000544540 USP21Q9UK80 565 aa28.33■■■□□ 2.13
TMEM72-203ENST00000544540 FNBP4Q8N3X1 1017 aaPredicted RBP28.31■■■□□ 2.12
TMEM72-203ENST00000544540 SBNO1A3KN83 1393 aa28.31■■■□□ 2.12
TMEM72-203ENST00000544540 PLEKHG5O94827 1062 aa28.3■■■□□ 2.12
TMEM72-203ENST00000544540 LMOD2Q6P5Q4 547 aa28.3■■■□□ 2.12
TMEM72-203ENST00000544540 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
TMEM72-203ENST00000544540 CDK12Q9NYV4 1490 aaPredicted RBP28.28■■■□□ 2.12
TMEM72-203ENST00000544540 TRIM26Q12899 539 aaPredicted RBP28.28■■■□□ 2.12
TMEM72-203ENST00000544540 NUDT16Q96DE0 195 aaKnown RBP28.28■■■□□ 2.12
TMEM72-203ENST00000544540 CDK19Q9BWU1 502 aa28.28■■■□□ 2.12
TMEM72-203ENST00000544540 ATP7BP35670 1465 aa28.27■■■□□ 2.12
TMEM72-203ENST00000544540 TRPM3Q9HCF6 1732 aaPredicted RBP28.27■■■□□ 2.12
TMEM72-203ENST00000544540 CABLES1Q8TDN4 633 aa28.27■■■□□ 2.12
TMEM72-203ENST00000544540 ITSN1Q15811 1721 aa28.26■■■□□ 2.11
TMEM72-203ENST00000544540 NGDNQ8NEJ9 315 aaKnown RBP28.25■■■□□ 2.11
TMEM72-203ENST00000544540 TRPC5Q9UL62 973 aaPredicted RBP28.25■■■□□ 2.11
TMEM72-203ENST00000544540 TRPM1Q7Z4N2 1603 aa28.25■■■□□ 2.11
TMEM72-203ENST00000544540 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
TMEM72-203ENST00000544540 BCL9LQ86UU0 1499 aa28.24■■■□□ 2.11
TMEM72-203ENST00000544540 RGS12O14924 1447 aa28.24■■■□□ 2.11
TMEM72-203ENST00000544540 ARHGEF10O15013 1369 aa28.24■■■□□ 2.11
TMEM72-203ENST00000544540 HAP1P54257 671 aaPredicted RBP28.23■■■□□ 2.11
TMEM72-203ENST00000544540 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
TMEM72-203ENST00000544540 CENPJQ9HC77 1338 aaPredicted RBP28.22■■■□□ 2.11
TMEM72-203ENST00000544540 ATRNO75882 1429 aa28.22■■■□□ 2.11
TMEM72-203ENST00000544540 ALS2Q96Q42 1657 aa28.21■■■□□ 2.11
TMEM72-203ENST00000544540 QRICH2Q9H0J4 1663 aa28.19■■■□□ 2.1
TMEM72-203ENST00000544540 TOPAZ1Q8N9V7 1692 aa28.19■■■□□ 2.1
TMEM72-203ENST00000544540 SLIT2O94813 1529 aa28.18■■■□□ 2.1
TMEM72-203ENST00000544540 PAK3O75914 559 aaPredicted RBP28.17■■■□□ 2.1
TMEM72-203ENST00000544540 NBPF8Q3BBV2 869 aa28.16■■■□□ 2.1
TMEM72-203ENST00000544540 CCDC61Q9Y6R9 512 aa28.16■■■□□ 2.1
TMEM72-203ENST00000544540 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.15■■■□□ 2.1
TMEM72-203ENST00000544540 ROCK2O75116 1388 aaKnown RBP28.15■■■□□ 2.1
TMEM72-203ENST00000544540 UPF1Q92900 1129 aaKnown RBP eCLIP28.15■■■□□ 2.1
TMEM72-203ENST00000544540 SRPK2P78362 688 aaKnown RBP28.14■■■□□ 2.1
TMEM72-203ENST00000544540 UNC5CLQ8IV45 518 aa28.14■■■□□ 2.1
TMEM72-203ENST00000544540 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms