RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
SNRNP70-203ENST00000544278 ZBTB47Q9UFB7 747 aaPredicted RBP20.59■□□□□ 0.89
SNRNP70-203ENST00000544278 MYOM1P52179 1685 aa20.59■□□□□ 0.89
SNRNP70-203ENST00000544278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNRNP70-203ENST00000544278 KIF1BO60333 1816 aa20.59■□□□□ 0.89
SNRNP70-203ENST00000544278 WAPLQ7Z5K2 1190 aa20.58■□□□□ 0.88
SNRNP70-203ENST00000544278 WWC1Q8IX03 1113 aa20.57■□□□□ 0.88
SNRNP70-203ENST00000544278 IPO9Q96P70 1041 aaKnown RBP20.57■□□□□ 0.88
SNRNP70-203ENST00000544278 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
SNRNP70-203ENST00000544278 IL27Q8NEV9 243 aa20.56■□□□□ 0.88
SNRNP70-203ENST00000544278 STAC3Q96MF2 364 aa20.56■□□□□ 0.88
SNRNP70-203ENST00000544278 SYNMO15061 1565 aa20.56■□□□□ 0.88
SNRNP70-203ENST00000544278 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
SNRNP70-203ENST00000544278 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
SNRNP70-203ENST00000544278 TSR2Q969E8 191 aaKnown RBP20.55■□□□□ 0.88
SNRNP70-203ENST00000544278 TCERG1O14776 1098 aaKnown RBP20.53■□□□□ 0.88
SNRNP70-203ENST00000544278 BACH2Q9BYV9 841 aa20.53■□□□□ 0.88
SNRNP70-203ENST00000544278 NCKAP5LQ9HCH0 1330 aa20.53■□□□□ 0.88
SNRNP70-203ENST00000544278 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
SNRNP70-203ENST00000544278 EVC2Q86UK5 1308 aa20.52■□□□□ 0.88
SNRNP70-203ENST00000544278 IGHDP01880 384 aa20.51■□□□□ 0.87
SNRNP70-203ENST00000544278 MYOM2P54296 1465 aa20.51■□□□□ 0.87
SNRNP70-203ENST00000544278 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
SNRNP70-203ENST00000544278 ABCC3O15438 1527 aa20.51■□□□□ 0.87
SNRNP70-203ENST00000544278 CABP1Q9NZU7 370 aa20.49■□□□□ 0.87
SNRNP70-203ENST00000544278 E9PSI1 815 aa20.49■□□□□ 0.87
SNRNP70-203ENST00000544278 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
SNRNP70-203ENST00000544278 RLBP1P12271 317 aa20.48■□□□□ 0.87
SNRNP70-203ENST00000544278 SIGLEC1Q9BZZ2 1709 aa20.48■□□□□ 0.87
SNRNP70-203ENST00000544278 HECW2Q9P2P5 1572 aa20.48■□□□□ 0.87
SNRNP70-203ENST00000544278 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.48■□□□□ 0.87
SNRNP70-203ENST00000544278 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
SNRNP70-203ENST00000544278 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
SNRNP70-203ENST00000544278 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
SNRNP70-203ENST00000544278 SOX12O15370 315 aa20.45■□□□□ 0.86
SNRNP70-203ENST00000544278 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
SNRNP70-203ENST00000544278 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
SNRNP70-203ENST00000544278 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
SNRNP70-203ENST00000544278 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
SNRNP70-203ENST00000544278 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
SNRNP70-203ENST00000544278 ADGRB1O14514 1584 aa20.43■□□□□ 0.86
SNRNP70-203ENST00000544278 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
SNRNP70-203ENST00000544278 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
SNRNP70-203ENST00000544278 HMOX1P09601 288 aa20.42■□□□□ 0.86
SNRNP70-203ENST00000544278 THUMPD2Q9BTF0 503 aaKnown RBP20.42■□□□□ 0.86
SNRNP70-203ENST00000544278 RTL5Q5HYW3 569 aaPredicted RBP20.42■□□□□ 0.86
SNRNP70-203ENST00000544278 FYB1O15117 783 aa20.42■□□□□ 0.86
SNRNP70-203ENST00000544278 TXNDC2Q86VQ3 553 aa20.42■□□□□ 0.86
SNRNP70-203ENST00000544278 NPC1L1Q9UHC9 1359 aa20.41■□□□□ 0.86
SNRNP70-203ENST00000544278 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
SNRNP70-203ENST00000544278 NRXN1Q9ULB1 1477 aa20.41■□□□□ 0.86
SNRNP70-203ENST00000544278 ELL2O00472 640 aaPredicted RBP20.4■□□□□ 0.86
SNRNP70-203ENST00000544278 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.86
SNRNP70-203ENST00000544278 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.86
SNRNP70-203ENST00000544278 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
SNRNP70-203ENST00000544278 POLR3AO14802 1390 aaPredicted RBP20.39■□□□□ 0.85
SNRNP70-203ENST00000544278 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
SNRNP70-203ENST00000544278 DIP2CQ9Y2E4 1556 aa20.39■□□□□ 0.85
SNRNP70-203ENST00000544278 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
SNRNP70-203ENST00000544278 SLC52A1Q9NWF4 448 aa20.38■□□□□ 0.85
SNRNP70-203ENST00000544278 IFT172Q9UG01 1749 aa20.38■□□□□ 0.85
SNRNP70-203ENST00000544278 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
SNRNP70-203ENST00000544278 GLI2P10070 1586 aa20.37■□□□□ 0.85
SNRNP70-203ENST00000544278 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
SNRNP70-203ENST00000544278 PPLO60437 1756 aa20.37■□□□□ 0.85
SNRNP70-203ENST00000544278 PCDHB15Q9Y5E8 787 aa20.36■□□□□ 0.85
SNRNP70-203ENST00000544278 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
SNRNP70-203ENST00000544278 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
SNRNP70-203ENST00000544278 INSRP06213 1382 aa20.35■□□□□ 0.85
SNRNP70-203ENST00000544278 SBNO2Q9Y2G9 1366 aa20.35■□□□□ 0.85
SNRNP70-203ENST00000544278 SEC24BO95487 1268 aa20.35■□□□□ 0.85
SNRNP70-203ENST00000544278 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
SNRNP70-203ENST00000544278 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
SNRNP70-203ENST00000544278 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
SNRNP70-203ENST00000544278 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
SNRNP70-203ENST00000544278 C8orf34Q49A92 452 aa20.34■□□□□ 0.85
SNRNP70-203ENST00000544278 RIPK4P57078 832 aa20.33■□□□□ 0.85
SNRNP70-203ENST00000544278 MS4A1P11836 297 aa20.33■□□□□ 0.84
SNRNP70-203ENST00000544278 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.84
SNRNP70-203ENST00000544278 NME9Q86XW9 330 aa20.33■□□□□ 0.84
SNRNP70-203ENST00000544278 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.84
SNRNP70-203ENST00000544278 MAPK8IP3Q9UPT6 1336 aa20.33■□□□□ 0.84
SNRNP70-203ENST00000544278 NEFMP07197 916 aa20.32■□□□□ 0.84
SNRNP70-203ENST00000544278 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
SNRNP70-203ENST00000544278 SMC4Q9NTJ3 1288 aa20.32■□□□□ 0.84
SNRNP70-203ENST00000544278 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
SNRNP70-203ENST00000544278 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
SNRNP70-203ENST00000544278 PLEKHG5O94827 1062 aa20.31■□□□□ 0.84
SNRNP70-203ENST00000544278 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
SNRNP70-203ENST00000544278 YTHDC2Q9H6S0 1430 aaKnown RBP20.3■□□□□ 0.84
SNRNP70-203ENST00000544278 NEO1Q92859 1461 aa20.3■□□□□ 0.84
SNRNP70-203ENST00000544278 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
SNRNP70-203ENST00000544278 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
SNRNP70-203ENST00000544278 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
SNRNP70-203ENST00000544278 FAM161AQ3B820 660 aa20.28■□□□□ 0.84
SNRNP70-203ENST00000544278 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
SNRNP70-203ENST00000544278 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
SNRNP70-203ENST00000544278 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
SNRNP70-203ENST00000544278 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
SNRNP70-203ENST00000544278 DCTN1Q14203 1278 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms