RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
ITM2C-209ENST00000543957 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
ITM2C-209ENST00000543957 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
ITM2C-209ENST00000543957 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
ITM2C-209ENST00000543957 PSDA5PKW4 1024 aaPredicted RBP18.75■□□□□ 0.59
ITM2C-209ENST00000543957 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
ITM2C-209ENST00000543957 GLI3P10071 1580 aa18.75■□□□□ 0.59
ITM2C-209ENST00000543957 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
ITM2C-209ENST00000543957 FOXO3O43524 673 aa18.74■□□□□ 0.59
ITM2C-209ENST00000543957 HRCP23327 699 aa18.74■□□□□ 0.59
ITM2C-209ENST00000543957 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
ITM2C-209ENST00000543957 PXDNQ92626 1479 aa18.73■□□□□ 0.59
ITM2C-209ENST00000543957 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
ITM2C-209ENST00000543957 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.72■□□□□ 0.59
ITM2C-209ENST00000543957 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
ITM2C-209ENST00000543957 SLIT2O94813 1529 aa18.72■□□□□ 0.59
ITM2C-209ENST00000543957 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
ITM2C-209ENST00000543957 HFM1A2PYH4 1435 aa18.7■□□□□ 0.58
ITM2C-209ENST00000543957 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
ITM2C-209ENST00000543957 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
ITM2C-209ENST00000543957 BAG6P46379 1132 aa18.69■□□□□ 0.58
ITM2C-209ENST00000543957 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
ITM2C-209ENST00000543957 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
ITM2C-209ENST00000543957 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
ITM2C-209ENST00000543957 ONECUT3O60422 494 aaPredicted RBP18.67■□□□□ 0.58
ITM2C-209ENST00000543957 VPS72Q15906 364 aa18.66■□□□□ 0.58
ITM2C-209ENST00000543957 CCDC9Q9Y3X0 531 aaKnown RBP18.65■□□□□ 0.58
ITM2C-209ENST00000543957 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
ITM2C-209ENST00000543957 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
ITM2C-209ENST00000543957 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.57
ITM2C-209ENST00000543957 NUTM2FA1L443 756 aa18.63■□□□□ 0.57
ITM2C-209ENST00000543957 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
ITM2C-209ENST00000543957 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
ITM2C-209ENST00000543957 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
ITM2C-209ENST00000543957 A0A0G2JS52 829 aa18.6■□□□□ 0.57
ITM2C-209ENST00000543957 MYT1Q01538 1121 aa18.6■□□□□ 0.57
ITM2C-209ENST00000543957 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
ITM2C-209ENST00000543957 NAIPQ13075 1403 aa18.59■□□□□ 0.57
ITM2C-209ENST00000543957 YY1P25490 414 aa18.59■□□□□ 0.57
ITM2C-209ENST00000543957 ITGAEP38570 1179 aa18.58■□□□□ 0.56
ITM2C-209ENST00000543957 KRT28Q7Z3Y7 464 aa18.58■□□□□ 0.56
ITM2C-209ENST00000543957 CABLES1Q8TDN4 633 aa18.58■□□□□ 0.56
ITM2C-209ENST00000543957 KIF1BO60333 1816 aa18.58■□□□□ 0.56
ITM2C-209ENST00000543957 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
ITM2C-209ENST00000543957 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
ITM2C-209ENST00000543957 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
ITM2C-209ENST00000543957 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
ITM2C-209ENST00000543957 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
ITM2C-209ENST00000543957 STK26Q9P289 416 aa18.53■□□□□ 0.56
ITM2C-209ENST00000543957 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
ITM2C-209ENST00000543957 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
ITM2C-209ENST00000543957 PSME1Q06323 249 aa18.52■□□□□ 0.56
ITM2C-209ENST00000543957 PLCH1Q4KWH8 1693 aa18.51■□□□□ 0.55
ITM2C-209ENST00000543957 TNS3Q68CZ2 1445 aa18.51■□□□□ 0.55
ITM2C-209ENST00000543957 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
ITM2C-209ENST00000543957 LMOD2Q6P5Q4 547 aa18.5■□□□□ 0.55
ITM2C-209ENST00000543957 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
ITM2C-209ENST00000543957 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
ITM2C-209ENST00000543957 EZH2Q15910 746 aaKnown RBP18.49■□□□□ 0.55
ITM2C-209ENST00000543957 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
ITM2C-209ENST00000543957 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
ITM2C-209ENST00000543957 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
ITM2C-209ENST00000543957 TECPR2O15040 1411 aa18.48■□□□□ 0.55
ITM2C-209ENST00000543957 SBNO1A3KN83 1393 aa18.47■□□□□ 0.55
ITM2C-209ENST00000543957 BTG4Q9NY30 223 aa18.47■□□□□ 0.55
ITM2C-209ENST00000543957 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
ITM2C-209ENST00000543957 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
ITM2C-209ENST00000543957 PPLO60437 1756 aa18.45■□□□□ 0.54
ITM2C-209ENST00000543957 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
ITM2C-209ENST00000543957 CAMKK2Q96RR4 588 aa18.45■□□□□ 0.54
ITM2C-209ENST00000543957 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
ITM2C-209ENST00000543957 TMEM132EQ6IEE7 984 aa18.44■□□□□ 0.54
ITM2C-209ENST00000543957 ABCA3Q99758 1704 aa18.42■□□□□ 0.54
ITM2C-209ENST00000543957 SPATA31A5Q5VU36 1347 aa18.42■□□□□ 0.54
ITM2C-209ENST00000543957 SPATA31A7Q8IWB4 1347 aa18.42■□□□□ 0.54
ITM2C-209ENST00000543957 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
ITM2C-209ENST00000543957 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
ITM2C-209ENST00000543957 TRIM37O94972 964 aa18.41■□□□□ 0.54
ITM2C-209ENST00000543957 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
ITM2C-209ENST00000543957 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.54
ITM2C-209ENST00000543957 APBA3O96018 575 aa18.39■□□□□ 0.53
ITM2C-209ENST00000543957 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
ITM2C-209ENST00000543957 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
ITM2C-209ENST00000543957 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
ITM2C-209ENST00000543957 SIRT1Q96EB6 747 aa18.38■□□□□ 0.53
ITM2C-209ENST00000543957 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
ITM2C-209ENST00000543957 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
ITM2C-209ENST00000543957 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
ITM2C-209ENST00000543957 KNDC1Q76NI1 1749 aa18.37■□□□□ 0.53
ITM2C-209ENST00000543957 NBPF8Q3BBV2 869 aa18.36■□□□□ 0.53
ITM2C-209ENST00000543957 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
ITM2C-209ENST00000543957 NBPF14Q5TI25 921 aa18.36■□□□□ 0.53
ITM2C-209ENST00000543957 PMFBP1Q8TBY8 1022 aa18.36■□□□□ 0.53
ITM2C-209ENST00000543957 YTHDC2Q9H6S0 1430 aaKnown RBP18.36■□□□□ 0.53
ITM2C-209ENST00000543957 SPON1Q9HCB6 807 aa18.36■□□□□ 0.53
ITM2C-209ENST00000543957 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
ITM2C-209ENST00000543957 THSD7AQ9UPZ6 1657 aa18.35■□□□□ 0.53
ITM2C-209ENST00000543957 SLC4A1APQ9BWU0 796 aaKnown RBP18.35■□□□□ 0.53
ITM2C-209ENST00000543957 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
ITM2C-209ENST00000543957 IFT172Q9UG01 1749 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms